Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G015600 Prunus persica HOM05D025481 ORTHO05D007911 0.0e+00 1749.9 863 100.0
Prupe.8G015100 Prunus persica HOM05D025481 ORTHO05D336252 8.3e-123 445.7 255 87.1
Prupe.8G015800 Prunus persica HOM05D025481 ORTHO05D334193 8.3e-123 445.7 255 87.1
Prupe.8G015500 Prunus persica HOM05D025481 ORTHO05D335362 1.0e-120 438.7 222 97.7
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 3.5e-44 184.5 310 41.6
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 6.5e-43 180.3 314 40.8
Prupe.8G015300 Prunus persica HOM05D025481 ORTHO05D335545 2.7e-41 174.9 87 100.0
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.2e-31 142.9 308 38.0
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 1.5e-31 142.5 308 37.7
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.2e-30 138.7 308 37.0
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.2e-30 138.7 308 37.0
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 8.3e-30 136.7 308 37.0
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.4e-29 135.2 308 37.3
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 3.7e-22 111.3 331 32.0
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 3.5e-20 104.8 305 31.1
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 3.6e-17 94.7 243 32.9
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 2.0e-15 89.0 336 29.2
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 8.3e-14 83.6 260 26.5
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 8.3e-14 83.6 308 28.6
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 2.4e-13 82.0 263 28.5
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 2.4e-13 82.0 263 27.4
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 3.2e-13 81.6 235 31.9
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 3.2e-13 81.6 263 28.1
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 4.1e-13 81.3 239 29.3
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 2.0e-12 79.0 241 30.3
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 4.6e-12 77.8 268 29.5
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 1.0e-11 76.6 170 30.6
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 1.0e-11 76.6 314 24.8
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.5e-10 72.8 243 28.0
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 1.9e-10 72.4 240 30.0
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.9e-10 72.4 243 28.0
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 4.3e-10 71.2 332 26.5
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 5.6e-10 70.9 243 27.6
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 5.6e-10 70.9 250 28.4
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 8.0e-09 67.0 247 27.9
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 8.0e-09 67.0 265 26.4
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 1.0e-08 66.6 242 28.5
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.0e-08 66.6 267 27.0
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 1.5e-07 62.8 233 27.9
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 2.0e-07 62.4 312 25.3
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 7.5e-07 60.5 210 25.7
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 2.2e-06 58.9 232 26.7
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 3.7e-06 58.2 249 28.5
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 8.3e-06 57.0 208 27.9


User provided reference genes

Program Settings