Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 2.0e-280 968.4 470 100.0
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 2.3e-103 380.2 445 49.9
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 9.8e-102 374.8 445 48.3
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 7.0e-100 368.6 358 53.9
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 1.3e-98 364.4 400 50.5
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 3.3e-97 359.8 458 46.5
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 6.2e-96 355.5 486 45.5
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 1.8e-95 354.0 400 49.0
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 3.4e-94 349.7 357 50.7
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 2.3e-90 337.0 408 45.6
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 2.1e-88 330.5 461 42.1
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 8.1e-88 328.6 382 48.4
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 9.6e-73 278.5 348 45.1
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 4.0e-71 273.1 248 54.8
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 8.4e-69 265.4 464 37.3
Prupe.7G215400 Prunus persica HOM05D007222 ORTHO05D010132 6.6e-66 255.8 330 45.2
Prupe.5G196400 Prunus persica HOM05D007222 ORTHO05D010132 2.4e-60 237.3 337 41.2
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 2.1e-51 207.6 371 37.7
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.1e-49 201.8 429 34.5
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 1.6e-48 198.0 373 36.5
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-47 194.9 373 36.2
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 5.3e-47 193.0 368 37.2
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.0e-47 192.2 362 36.5
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 1.5e-46 191.4 362 36.7
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 2.0e-46 191.0 362 36.2
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 2.0e-46 191.0 361 36.0
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 2.0e-46 191.0 356 37.1
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 2.0e-46 191.0 368 36.4
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 2.0e-46 191.0 368 36.4
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.5e-46 189.9 361 36.3
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 5.8e-46 189.5 372 35.5
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.7e-45 188.0 368 35.6
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.9e-45 187.2 366 35.0
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.9e-45 187.2 366 35.0
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.5e-45 186.0 361 35.7
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 1.9e-44 184.5 368 35.3
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.1e-44 182.6 366 34.4
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.3e-44 182.2 368 35.3
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 9.3e-44 182.2 366 34.2
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 1.2e-43 181.8 355 35.2
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 6.7e-42 176.0 385 33.5
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 9.7e-41 172.2 397 31.2
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 2.8e-40 170.6 372 33.6
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 4.8e-40 169.9 373 33.8
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 1.8e-39 167.9 382 35.1
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 5.3e-39 166.4 382 34.8
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.9e-39 166.0 345 35.1
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 2.0e-38 164.5 376 33.0
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.4e-38 163.7 362 34.5
Prupe.5G190200 Prunus persica HOM05D007222 ORTHO05D010132 7.7e-38 162.5 131 59.5
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 3.8e-37 160.2 392 31.9
Prupe.5G149900 Prunus persica HOM05D007222 ORTHO05D010132 1.9e-36 157.9 156 53.2
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 7.2e-36 156.0 356 32.6
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-35 154.5 237 40.1
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 7.9e-35 152.5 386 33.7
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 6.7e-34 149.4 376 33.2
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 9.7e-33 145.6 269 36.1
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 6.3e-32 142.9 348 30.7
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 8.2e-32 142.5 365 31.8
FvH4_5g02920 Fragaria vesca HOM05D007222 ORTHO05D046396 1.8e-31 141.4 364 30.5
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 1.5e-30 138.3 364 30.2
Prupe.5G121900 Prunus persica HOM05D007222 ORTHO05D010132 1.5e-30 138.3 221 43.9
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 2.0e-30 137.9 252 35.3
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.1e-28 132.1 365 30.4
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.9e-27 125.9 272 35.7
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 6.7e-26 122.9 273 31.9
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 9.7e-25 119.0 259 32.8
FAN18G3680 Fragaria x ananassa HOM05D007222 ORTHO05D020701 3.7e-24 117.1 348 30.2
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.2e-24 115.9 181 39.2
Prupe.5G150200 Prunus persica HOM05D007222 ORTHO05D010132 4.1e-23 113.6 125 45.6
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 5.0e-21 106.7 180 37.2
RcHm_v2.0_Chr2g0100421 Rosa chinensis HOM05D013290 ORTHO05D016295 1.5e-20 105.1 249 32.5
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.2e-20 104.0 156 41.0
FAN26G2054 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.8e-18 98.2 309 28.5
FAN26G0503 Fragaria x ananassa HOM05D013290 ORTHO05D016295 4.0e-18 97.1 257 30.0
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 4.0e-18 97.1 290 29.3
FvH4_5g25390 Fragaria vesca HOM05D007222 ORTHO05D020701 1.1e-17 95.5 188 35.1
FAN26G0118 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.1e-17 95.5 310 29.0
FvH4_7g27640 Fragaria vesca HOM05D007222 ORTHO05D010132 9.7e-17 92.4 126 42.1
FAN06G1181 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.7e-16 90.5 254 29.1
FvH4_1g11671 Fragaria vesca HOM05D013290 ORTHO05D016295 1.1e-15 89.0 262 30.2
MD06G1078700 Malus domestica HOM05D007222 ORTHO05D010132 1.1e-15 89.0 182 31.3
FAN06G2198 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.0e-15 86.3 178 35.4
FvH4_5g15972 Fragaria vesca HOM05D007222 ORTHO05D035251 1.2e-14 85.5 163 33.7
FAN19G0139 Fragaria x ananassa HOM05D013290 ORTHO05D016295 2.6e-14 84.3 260 29.6
FAN03G1782 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.7e-13 81.6 170 33.5
FAN06G3913 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.3e-10 71.2 230 28.3
MD14G1191500 Malus domestica HOM05D007222 ORTHO05D048640 5.2e-10 70.1 152 34.9
MD14G1191600 Malus domestica HOM05D007222 ORTHO05D048640 9.8e-09 65.9 168 32.1
Prupe.3G199300 Prunus persica HOM05D007222 ORTHO05D010132 9.8e-09 65.9 51 56.9
FAN10G0066 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.7e-08 63.9 78 43.6
FAN06G1627 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.8e-08 63.5 79 45.6
FAN01G0286 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.8e-07 61.6 91 38.5
FAN03G1041 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.6e-06 58.5 78 42.3
FAN06G0895 Fragaria x ananassa HOM05D007222 ORTHO05D046523 2.7e-06 57.8 144 34.7
FAN13G2243 Fragaria x ananassa HOM05D007222 ORTHO05D020701 2.7e-06 57.8 128 33.6


User provided reference genes

Program Settings