Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G004900 Prunus persica HOM05D007775 ORTHO05D009858 1.4e-56 222.6 107 100.0
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 1.3e-41 172.9 85 98.8
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 2.9e-33 145.2 85 83.5
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 1.3e-28 129.8 85 69.4
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 1.3e-28 129.8 85 71.8
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 3.6e-28 128.3 85 68.2
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 3.6e-28 128.3 85 68.2
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 6.4e-25 117.5 84 70.2
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 6.4e-25 117.5 85 64.7
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 1.1e-24 116.7 85 68.2
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 6.0e-23 110.9 84 60.7
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 1.8e-22 109.4 85 58.8
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 1.9e-21 105.9 85 60.0
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 5.6e-21 104.4 85 56.5
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 9.6e-21 103.6 85 57.6
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 1.6e-20 102.8 99 54.5
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 1.6e-20 102.8 82 61.0
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 3.7e-20 101.7 84 58.3
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 4.8e-20 101.3 96 53.1
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 6.2e-20 100.9 95 55.8
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 8.1e-20 100.5 97 54.6
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 1.4e-19 99.8 82 58.5
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 2.4e-19 99.0 85 54.1
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 3.1e-19 98.6 85 56.5
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 1.2e-18 96.7 81 60.5
QL06p007898 Quercus lobata HOM05D007775 ORTHO05D009858 1.5e-18 96.3 85 58.8
AL92U10060 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 2.0e-18 95.9 81 55.6
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 2.0e-18 95.9 91 53.8
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 2.6e-18 95.5 73 58.9
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 3.4e-18 95.1 95 51.6
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 3.4e-18 95.1 94 51.1
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 1.3e-17 93.2 82 54.9
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 1.3e-17 93.2 85 55.3
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 1.3e-17 93.2 87 56.3
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 1.7e-17 92.8 80 57.5
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 2.2e-17 92.4 85 50.6
AL4G36400 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 2.9e-17 92.0 82 53.7
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 2.9e-17 92.0 85 51.8
ATR0706G202 Amborella trichopoda HOM05D007775 ORTHO05D009858 3.8e-17 91.7 77 57.1
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 6.4e-17 90.9 97 50.5
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 1.1e-16 90.1 94 51.1
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 1.1e-16 90.1 68 66.2
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 1.9e-16 89.4 68 66.2
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 2.4e-16 89.0 80 56.2
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 3.2e-16 88.6 73 58.9
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 4.2e-16 88.2 94 50.0
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 5.5e-16 87.8 94 50.0
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 5.5e-16 87.8 73 57.5
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 5.5e-16 87.8 94 50.0
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 5.5e-16 87.8 75 57.3
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 5.5e-16 87.8 66 66.7
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 7.1e-16 87.4 95 50.5
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 7.1e-16 87.4 95 50.5
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 7.1e-16 87.4 98 51.0
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 9.3e-16 87.0 75 50.7
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 9.3e-16 87.0 98 48.0
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 9.3e-16 87.0 68 64.7
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 1.6e-15 86.3 69 62.3
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 2.1e-15 85.9 85 49.4
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 2.1e-15 85.9 91 52.7
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 2.7e-15 85.5 73 56.2
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 3.5e-15 85.1 77 55.8
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 4.6e-15 84.7 75 54.7
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 4.6e-15 84.7 75 54.7
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 4.6e-15 84.7 69 63.8
CSS0035717 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 6.0e-15 84.3 54 72.2
CSS0036115 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 6.0e-15 84.3 54 72.2
ECA240G4119 Erigeron canadensis HOM05D007775 ORTHO05D009858 6.0e-15 84.3 83 48.2
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 7.9e-15 84.0 73 53.4
Sc06g0007440 Simmondsia chinensis HOM05D007775 ORTHO05D009858 1.8e-14 82.8 73 54.8
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 3.0e-14 82.0 69 62.3
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 6.7e-14 80.9 98 43.9
CSS0050081 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 6.7e-14 80.9 54 66.7
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 8.7e-14 80.5 75 50.7
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 1.5e-13 79.7 73 50.7
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 2.1e-12 75.9 93 46.2
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 9.0e-11 70.5 106 40.6
SMO147G0036 Selaginella moellendorffii HOM05D007775 ORTHO05D009858 2.5e-08 62.4 84 38.1
vmacro08108 Vaccinium macrocarpon HOM05D007775 ORTHO05D009858 2.5e-08 62.4 47 57.4
SEGI_15450 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 2.7e-07 58.9 69 40.6
Pp3c21_11960 Physcomitrium patens HOM05D007775 ORTHO05D009858 3.5e-07 58.5 82 36.6
BcaC02g12905 Brassica carinata HOM05D007775 ORTHO05D009858 1.8e-06 56.2 64 48.4
FAN12G2785 Fragaria x ananassa HOM05D007775 ORTHO05D009858 5.1e-06 54.7 38 63.2


User provided reference genes

Program Settings