Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 8.3e-120 433.7 218 100.0
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 3.4e-89 332.0 218 73.4
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 2.2e-88 329.3 214 76.2
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 3.2e-87 325.5 212 75.5
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.1e-87 325.1 214 75.2
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 4.1e-87 325.1 209 75.6
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 1.2e-86 323.6 214 74.8
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 3.3e-84 315.5 214 71.5
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 7.3e-84 314.3 214 72.0
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 1.8e-82 309.7 218 67.9
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 8.9e-82 307.4 212 71.7
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 1.5e-81 306.6 214 70.6
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 2.0e-81 306.2 215 68.4
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 2.6e-81 305.8 211 70.6
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 4.4e-81 305.1 214 69.6
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 5.8e-81 304.7 211 70.1
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 7.6e-81 304.3 211 68.7
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 9.9e-81 303.9 211 69.7
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 1.4e-79 300.1 212 70.3
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 2.4e-79 299.3 214 70.1
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 3.2e-79 298.9 214 66.4
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 2.1e-78 296.2 212 69.8
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 2.7e-78 295.8 219 64.4
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 2.7e-78 295.8 216 68.1
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 4.6e-78 295.0 214 65.4
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 7.8e-78 294.3 207 70.0
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 2.3e-77 292.7 211 67.3
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 3.0e-77 292.4 210 67.1
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 3.9e-77 292.0 214 65.0
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 6.6e-77 291.2 211 68.2
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 8.6e-77 290.8 205 69.3
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 1.1e-76 290.4 214 66.8
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 1.5e-76 290.0 212 64.6
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 2.5e-76 289.3 211 64.9
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 4.3e-76 288.5 219 65.3
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 5.6e-76 288.1 214 65.9
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 2.8e-75 285.8 212 67.5
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 4.7e-75 285.0 214 64.5
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 4.7e-75 285.0 214 65.9
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 1.1e-74 283.9 214 64.0
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 1.8e-74 283.1 212 67.0
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 2.4e-74 282.7 210 65.2
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 3.1e-74 282.3 214 64.0
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 5.2e-74 281.6 211 65.4
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 5.2e-74 281.6 216 66.2
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 8.9e-74 280.8 211 65.9
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 8.9e-74 280.8 211 62.1
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 1.5e-73 280.0 212 66.0
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 2.6e-73 279.3 211 64.9
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 7.6e-73 277.7 212 64.2
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 2.9e-72 275.8 214 62.1
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 1.4e-71 273.5 211 63.0
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 1.6e-70 270.0 211 61.1
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 2.7e-70 269.2 200 66.0
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 6.0e-70 268.1 211 62.1
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 1.3e-69 266.9 211 60.7
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 1.7e-69 266.5 212 62.3
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 8.7e-69 264.2 214 61.2
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 1.9e-68 263.1 211 61.1
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 2.5e-68 262.7 211 59.7
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 4.3e-68 261.9 211 59.7
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 9.6e-68 260.8 211 60.2
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 1.3e-67 260.4 211 59.7
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 4.8e-67 258.5 211 58.8
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 4.8e-67 258.5 203 62.1
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 3.1e-66 255.8 211 59.2
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 4.0e-66 255.4 185 69.2
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 6.9e-66 254.6 211 60.2
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 2.0e-65 253.1 211 57.8
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 4.5e-65 251.9 203 60.6
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 1.1e-63 247.3 203 59.1
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 4.2e-63 245.4 203 59.1
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 2.7e-62 242.7 200 60.0
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 2.7e-62 242.7 210 55.2
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.1e-60 237.3 239 53.6
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 1.1e-60 237.3 212 57.5
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.5e-60 236.9 154 74.7
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 2.2e-56 223.0 211 56.4
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 1.1e-55 220.7 209 49.3
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 1.4e-55 220.3 214 55.1
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 2.7e-54 216.1 158 69.0
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 7.9e-54 214.5 129 78.3
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.3e-53 213.8 211 54.0
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.0e-53 212.6 164 62.2
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 6.7e-53 211.5 236 49.2
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 1.1e-52 210.7 124 79.0
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 3.7e-51 205.7 184 59.2
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 8.1e-51 204.5 187 57.2
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 2.4e-50 203.0 212 50.0
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 2.2e-48 196.4 211 46.9
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 1.5e-44 183.7 167 57.5
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 2.4e-42 176.4 212 38.2
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 1.5e-41 173.7 120 70.8
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 1.0e-40 171.0 194 48.5
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 2.9e-40 169.5 126 63.5
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 3.9e-37 159.1 97 76.3
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 6.9e-34 148.3 82 84.1
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.5e-33 147.1 92 75.0
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 4.2e-31 139.0 216 35.6
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 5.0e-24 115.5 162 35.2
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 5.0e-24 115.5 89 64.0
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.4e-23 114.0 89 62.9
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 9.7e-20 101.3 158 42.4
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 9.7e-20 101.3 158 42.4
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.8e-19 99.0 158 41.8
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 3.5e-17 92.8 244 28.3
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 7.2e-15 85.1 154 38.3
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 2.1e-14 83.6 133 41.4
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.1e-10 69.7 88 43.2
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 1.9e-07 60.5 77 46.8
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 7.2e-07 58.5 44 61.4


User provided reference genes

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