Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 0.0e+00 1407.1 706 100.0
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 0.0e+00 1174.5 707 83.9
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 0.0e+00 1165.6 707 83.5
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 0.0e+00 1164.1 707 83.5
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 0.0e+00 1149.4 706 82.6
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 0.0e+00 1089.7 628 87.1
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 0.0e+00 1076.2 714 78.2
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.8e-312 1073.9 697 79.3
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 4.9e-307 1057.4 713 77.3
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 7.9e-305 1050.0 718 75.6
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 2.3e-304 1048.5 674 79.5
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 2.3e-304 1048.5 674 79.5
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 3.9e-304 1047.7 697 77.2
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 5.1e-304 1047.3 683 77.0
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 2.4e-301 1038.5 685 76.4
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 1.3e-299 1032.7 685 75.6
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 4.6e-297 1024.2 695 74.5
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 1.3e-296 1022.7 715 75.4
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 3.0e-296 1021.5 687 75.0
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 8.2e-294 1013.4 698 74.6
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 9.0e-293 1010.0 691 74.5
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.3e-291 1006.1 701 74.2
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 2.2e-291 1005.4 675 75.1
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 5.0e-291 1004.2 704 72.3
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 6.5e-291 1003.8 714 72.3
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 2.1e-289 998.8 689 73.4
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 3.6e-289 998.0 714 72.3
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 8.8e-288 993.4 666 75.8
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 2.5e-287 991.9 729 69.7
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 4.1e-285 984.6 697 73.7
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 4.5e-284 981.1 709 71.7
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 1.0e-283 979.9 712 70.9
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 1.7e-283 979.2 712 70.1
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 2.5e-282 975.3 696 71.0
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 4.2e-282 974.5 685 72.6
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 5.5e-282 974.2 675 72.6
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 9.4e-282 973.4 678 73.2
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 2.1e-281 972.2 681 72.1
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 1.0e-280 969.9 706 70.7
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 1.8e-280 969.1 709 70.8
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 2.3e-280 968.8 678 72.7
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 6.7e-280 967.2 673 72.5
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 8.8e-280 966.8 667 74.4
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 1.5e-279 966.1 665 72.8
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 8.2e-278 960.3 686 70.8
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 1.8e-277 959.1 685 70.7
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 3.1e-277 958.4 687 70.9
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 7.0e-277 957.2 680 71.9
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 9.1e-277 956.8 686 70.6
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.5e-276 956.1 664 72.3
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 2.0e-276 955.7 685 70.8
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 2.6e-276 955.3 685 70.8
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 7.7e-276 953.7 691 70.6
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 2.2e-275 952.2 705 69.4
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 3.8e-275 951.4 731 68.4
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 1.4e-274 949.5 675 73.3
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 1.4e-274 949.5 684 72.1
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 2.1e-273 945.7 691 70.2
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 4.7e-273 944.5 667 72.7
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 6.1e-273 944.1 686 70.3
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 8.0e-273 943.7 713 68.6
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 3.9e-272 941.4 672 71.1
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 5.2e-272 941.0 664 71.8
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 6.7e-272 940.6 686 69.8
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.1e-271 939.9 685 70.7
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 2.6e-271 938.7 665 72.5
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 9.7e-271 936.8 666 71.3
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 5.3e-269 931.0 677 69.9
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.6e-268 929.5 689 69.2
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 6.5e-267 924.1 711 66.8
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 2.5e-266 922.2 715 68.0
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 8.0e-265 917.1 666 70.9
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 1.5e-263 912.9 678 69.2
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 7.0e-261 904.0 695 67.8
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.6e-260 902.9 604 75.8
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 1.2e-257 893.3 762 62.6
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 1.2e-255 886.7 670 66.6
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 2.3e-251 872.5 717 63.5
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 3.6e-249 865.1 666 69.1
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 1.3e-246 856.7 595 72.4
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 4.1e-245 851.7 674 66.8
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 1.9e-242 842.8 599 70.8
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 5.6e-242 841.3 663 68.3
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 5.6e-242 841.3 651 64.8
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 4.9e-238 828.2 595 71.4
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 7.0e-237 824.3 663 63.8
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 4.7e-233 811.6 573 71.0
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 2.0e-231 806.2 623 66.8
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 3.7e-230 802.0 579 71.0
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 1.7e-227 793.1 634 65.6
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 8.1e-209 731.1 1256 39.1
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 1.7e-182 643.7 652 52.6
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 2.2e-182 643.3 625 55.5
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 1.6e-180 637.1 619 53.6
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 6.1e-180 635.2 668 51.6
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.4e-176 624.0 441 73.2
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 7.7e-167 591.7 400 74.0
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 5.3e-160 568.9 401 70.8
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.5e-157 560.1 385 75.6
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 8.6e-134 481.9 724 41.3
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 2.1e-132 477.2 332 72.3
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 5.2e-131 472.6 623 45.1
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 2.4e-128 463.8 477 51.2
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 5.2e-115 419.5 273 76.6
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.4e-107 394.8 289 71.6
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 4.3e-101 373.2 225 82.7
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 2.3e-94 350.9 260 70.0
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 1.5e-93 348.2 465 48.4
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 9.6e-93 345.5 271 66.8
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 6.6e-86 322.8 203 79.8
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 2.4e-83 314.3 264 64.4
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.2e-81 307.8 203 75.4
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 6.4e-81 306.2 628 36.5
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.1e-71 274.6 155 87.1
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 2.1e-47 194.9 148 65.5
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 1.1e-43 182.6 146 65.1
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 4.5e-42 177.2 203 54.2
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 2.5e-40 171.4 196 52.6
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 3.2e-32 144.4 102 68.6
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 1.6e-26 125.6 111 61.3
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 5.5e-24 117.1 91 64.8
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 3.1e-19 101.3 120 44.2
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 2.3e-17 95.1 53 79.2
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 3.3e-16 91.3 174 37.9
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.7e-12 79.0 68 58.8
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 2.9e-12 78.2 69 56.5


User provided reference genes

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