Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 1.2e-188 662.9 311 100.0
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 5.2e-176 620.9 309 91.9
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 4.4e-175 617.8 309 91.3
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 9.8e-175 616.7 307 92.2
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 8.3e-174 613.6 307 91.5
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 3.2e-173 611.7 309 91.9
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 2.0e-172 609.0 311 90.7
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.7e-172 608.6 309 90.6
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 7.8e-172 607.1 308 91.6
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 1.7e-171 605.9 308 90.9
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.7e-171 605.9 309 90.6
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 3.0e-171 605.1 309 89.3
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 3.9e-171 604.7 309 89.3
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 1.1e-170 603.2 309 89.6
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.1e-170 603.2 305 91.5
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 1.5e-170 602.8 310 90.3
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 7.3e-170 600.5 309 89.3
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 1.6e-169 599.4 305 90.2
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 2.8e-169 598.6 309 88.0
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 2.8e-169 598.6 309 88.7
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 6.2e-169 597.4 308 89.0
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 3.1e-168 595.1 308 89.6
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 1.5e-167 592.8 308 89.9
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 5.8e-167 590.9 303 89.4
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 9.8e-167 590.1 309 87.1
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.7e-166 589.3 309 88.7
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 2.2e-166 589.0 311 88.1
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.2e-166 589.0 308 88.3
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 2.4e-165 585.5 307 87.0
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 3.2e-165 585.1 309 88.3
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 5.4e-165 584.3 305 87.5
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.7e-164 582.0 309 86.1
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.7e-163 579.3 308 87.0
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 3.0e-163 578.6 312 85.6
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 5.1e-163 577.8 310 86.1
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 6.6e-163 577.4 309 85.8
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 8.6e-163 577.0 310 86.1
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.5e-162 576.2 305 85.6
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 3.3e-162 575.1 305 85.9
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 7.3e-162 573.9 309 85.4
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 2.8e-161 572.0 308 85.7
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 4.7e-161 571.2 309 86.4
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 1.1e-160 570.1 315 81.6
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 1.4e-160 569.7 318 81.4
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 5.2e-160 567.8 304 82.9
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 6.8e-160 567.4 315 81.6
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 4.4e-159 564.7 302 86.1
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 5.8e-159 564.3 315 81.0
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 7.5e-159 563.9 309 85.8
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 3.7e-158 561.6 313 81.5
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 7.1e-157 557.4 305 85.2
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 7.1e-157 557.4 306 82.0
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 1.0e-155 553.5 306 81.0
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 1.7e-155 552.7 309 83.5
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 4.3e-154 548.1 309 81.9
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 5.6e-154 547.7 309 81.6
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 9.5e-154 547.0 309 81.6
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 9.5e-154 547.0 309 81.6
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 9.5e-154 547.0 309 81.6
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 4.7e-153 544.7 301 84.1
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 3.1e-152 542.0 308 82.8
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 6.8e-152 540.8 304 80.3
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 4.4e-151 538.1 407 66.6
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 5.8e-151 537.7 314 79.9
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 5.8e-151 537.7 309 80.9
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 7.6e-151 537.3 291 86.6
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 1.9e-149 532.7 361 70.9
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 4.6e-148 528.1 303 82.5
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 5.6e-146 521.2 308 77.3
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 1.8e-144 516.2 278 84.9
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 1.8e-144 516.2 263 90.9
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 1.2e-143 513.5 268 87.7
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 6.4e-142 507.7 293 82.3
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 4.6e-132 474.9 327 69.1
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 1.8e-131 473.0 309 73.5
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.3e-130 468.8 262 82.4
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 5.6e-130 468.0 303 72.6
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 1.1e-125 453.8 308 71.1
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 9.3e-125 450.7 248 83.5
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 1.0e-123 447.2 298 65.8
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.3e-115 420.2 342 63.2
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 4.7e-100 368.6 269 67.7
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.8e-97 359.4 303 61.1
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.4e-96 356.3 180 89.4
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 6.7e-91 338.2 186 86.6
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 3.3e-90 335.9 166 91.0
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 4.4e-90 335.5 179 84.4
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 7.4e-90 334.7 166 89.8
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 8.2e-89 331.3 166 89.8
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 2.4e-88 329.7 166 87.3
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 5.3e-88 328.6 166 89.2
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 5.3e-88 328.6 165 88.5
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 4.5e-87 325.5 165 89.7
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 4.5e-87 325.5 166 87.3
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.5e-85 320.5 166 86.1
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 3.2e-85 319.3 165 86.1
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 7.2e-85 318.2 160 88.8
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 9.4e-85 317.8 166 86.1
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 2.1e-84 316.6 161 88.8
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 8.0e-84 314.7 166 84.9
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 3.5e-79 299.3 182 76.4
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 3.8e-78 295.8 248 54.8
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 1.1e-72 277.7 142 89.4
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 1.7e-62 243.8 123 90.2
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 6.6e-62 241.9 123 92.7
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 5.6e-61 238.8 122 89.3
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 1.6e-60 237.3 122 89.3
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 2.8e-60 236.5 122 86.9
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 3.6e-60 236.1 122 89.3
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 8.0e-60 235.0 122 88.5
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.0e-59 234.6 122 89.3
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 3.1e-59 233.0 122 85.2
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 2.9e-57 226.5 122 82.0
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 6.4e-57 225.3 122 83.6
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 9.2e-56 221.5 122 84.4
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 9.2e-56 221.5 122 84.4
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 3.9e-54 216.1 123 82.9
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 5.0e-54 215.7 108 89.8
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 2.5e-53 213.4 124 76.6
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 2.8e-52 209.9 117 81.2
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 3.4e-50 203.0 142 71.1
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.9e-48 197.2 101 83.2
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 6.8e-35 152.1 243 38.3
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 6.8e-35 152.1 89 74.2
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 9.3e-32 141.7 69 92.8
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 8.7e-30 135.2 78 76.9
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 5.6e-29 132.5 71 84.5
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.5e-26 124.4 66 86.4
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.9e-21 107.5 71 74.6
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 3.1e-19 100.1 66 72.7
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 1.6e-15 87.8 46 87.0
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 2.3e-14 84.0 47 80.9
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 3.1e-11 73.6 34 94.1
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 4.0e-11 73.2 40 82.5
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 1.9e-08 64.3 56 58.9


User provided reference genes

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