Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 8.6e-145 516.9 254 100.0
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 1.6e-130 469.5 256 91.4
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 9.9e-125 450.3 254 87.4
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.1e-123 446.8 254 86.2
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.1e-123 446.8 254 86.2
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.4e-123 445.7 250 87.2
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 3.2e-123 445.3 253 86.2
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.3e-113 413.3 254 81.9
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 3.4e-109 398.7 254 77.6
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 1.0e-108 397.1 255 76.1
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 3.5e-106 388.7 256 74.2
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 6.1e-106 387.9 248 76.2
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 1.0e-105 387.1 255 73.3
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.3e-105 386.7 215 83.7
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 6.7e-105 384.4 250 72.8
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.1e-104 383.6 253 73.9
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 4.3e-104 381.7 255 72.5
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 4.3e-104 381.7 253 73.5
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 3.7e-103 378.6 249 76.3
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.8e-103 378.3 253 73.1
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 3.4e-101 372.1 236 73.3
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 1.3e-100 370.2 250 74.4
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 3.8e-100 368.6 248 75.0
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 3.8e-100 368.6 250 71.2
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 1.4e-99 366.7 218 76.1
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 9.4e-99 364.0 247 71.3
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 6.1e-98 361.3 256 69.5
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 7.9e-98 360.9 242 71.9
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 5.1e-97 358.2 217 77.0
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 8.8e-97 357.5 252 70.2
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 8.8e-97 357.5 206 80.1
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 1.1e-96 357.1 231 73.2
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 1.1e-96 357.1 250 68.4
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 1.5e-96 356.7 248 72.6
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 1.5e-96 356.7 246 72.4
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 2.0e-96 356.3 250 69.6
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 2.5e-96 355.9 218 77.1
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 3.3e-96 355.5 250 70.0
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 3.3e-96 355.5 250 70.0
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 4.3e-96 355.1 246 71.5
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 7.4e-96 354.4 237 71.7
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 9.7e-96 354.0 253 69.6
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 1.3e-95 353.6 236 71.6
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.3e-95 353.6 221 75.6
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.7e-95 353.2 231 72.3
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.3e-95 351.3 248 70.2
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 8.2e-95 350.9 247 68.8
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 8.2e-95 350.9 245 67.8
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 1.4e-94 350.1 252 69.4
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 4.1e-94 348.6 224 73.7
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 5.3e-94 348.2 248 68.5
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 9.1e-94 347.4 246 70.3
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 9.1e-94 347.4 218 74.3
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 9.1e-94 347.4 231 72.7
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 9.1e-94 347.4 206 78.2
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 2.6e-93 345.9 231 71.9
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.0e-92 344.0 207 75.8
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 1.0e-92 344.0 207 75.8
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 1.0e-92 344.0 230 70.4
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 1.3e-92 343.6 206 77.2
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 1.3e-92 343.6 249 68.7
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 2.9e-92 342.4 209 74.6
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 5.0e-92 341.7 207 76.3
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 6.5e-92 341.3 250 67.6
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.9e-91 339.7 248 67.3
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 1.9e-91 339.7 239 68.6
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 3.2e-91 339.0 250 66.8
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 9.4e-91 337.4 204 77.9
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 1.2e-90 337.0 244 67.2
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.6e-90 336.7 251 67.3
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 6.1e-90 334.7 246 67.9
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 7.9e-90 334.3 248 68.1
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 1.0e-89 334.0 195 77.4
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 1.4e-89 333.6 248 69.0
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 3.0e-89 332.4 292 58.9
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 3.9e-89 332.0 188 78.7
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 5.1e-89 331.6 210 75.7
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 8.8e-89 330.9 237 69.2
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 1.1e-88 330.5 263 66.9
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 1.3e-87 327.0 202 73.8
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 4.5e-85 318.5 186 77.4
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 3.8e-84 315.5 208 71.6
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 5.0e-84 315.1 255 62.0
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 6.5e-84 314.7 222 69.4
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 8.5e-84 314.3 224 67.4
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 1.5e-83 313.5 209 71.8
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 7.2e-83 311.2 189 76.7
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 9.4e-83 310.8 206 69.9
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 1.2e-82 310.5 205 72.2
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 2.1e-82 309.7 249 62.2
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 8.8e-81 304.3 175 80.6
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 7.5e-80 301.2 254 61.0
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 8.2e-79 297.7 178 77.5
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.4e-78 297.0 170 78.8
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 9.1e-78 294.3 169 78.7
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 3.2e-75 285.8 169 79.3
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 3.1e-70 269.2 205 64.9
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.6e-66 256.9 163 68.7
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.7e-63 246.9 182 67.0
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.0e-61 240.0 139 81.3
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 3.8e-60 235.7 206 57.8
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 2.3e-57 226.5 174 58.0
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 5.7e-56 221.9 198 54.0
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 7.5e-56 221.5 200 52.0
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 1.8e-54 216.9 256 52.7
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 6.0e-37 158.7 178 51.1
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 1.0e-36 157.9 160 51.2
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.2e-26 122.1 75 76.0
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 6.2e-26 122.1 170 41.8
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 8.1e-26 121.7 64 82.8
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 7.6e-24 115.2 60 83.3
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.9e-19 100.5 80 61.2
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 2.8e-10 70.1 62 46.8


User provided reference genes

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