Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 0.0e+00 1270.8 652 100.0
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.0e-254 882.5 654 73.2
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 1.3e-248 863.2 549 82.5
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 2.4e-247 859.0 547 81.9
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 2.6e-246 855.5 548 80.8
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.4e-241 837.4 547 79.5
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 4.8e-240 834.7 547 79.9
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.1e-236 823.5 549 79.2
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 8.8e-226 787.3 620 70.0
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 2.1e-211 739.6 599 66.6
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 8.8e-210 734.2 553 72.3
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 4.1e-207 725.3 554 74.2
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 1.4e-202 710.3 567 68.4
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.8e-202 709.9 558 69.9
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 4.0e-202 708.8 549 69.9
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 9.8e-201 704.1 547 69.8
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 4.9e-200 701.8 546 70.3
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 9.2e-199 697.6 544 71.0
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 3.5e-198 695.7 565 68.0
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 7.3e-196 688.0 548 68.8
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 6.2e-195 684.9 553 68.2
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 9.2e-191 671.0 581 64.0
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 4.0e-186 655.6 510 69.6
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 4.0e-186 655.6 510 69.4
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 4.4e-185 652.1 510 69.0
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 7.5e-185 651.4 550 64.4
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 1.7e-184 650.2 581 63.9
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 1.9e-183 646.7 564 64.9
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 4.1e-183 645.6 531 66.9
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 7.8e-182 641.3 541 66.2
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.3e-181 639.8 553 64.6
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.9e-180 636.7 511 68.9
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 4.0e-178 629.0 509 68.2
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 2.2e-176 623.2 564 62.8
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 2.7e-174 616.3 515 66.2
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 8.6e-173 611.3 511 65.9
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 9.6e-172 607.8 513 65.9
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 1.2e-171 607.4 549 61.9
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 2.1e-171 606.7 553 62.0
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.8e-170 603.6 519 63.8
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 3.1e-170 602.8 510 65.7
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 8.9e-170 601.3 511 66.1
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 1.2e-169 600.9 515 64.5
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 9.9e-169 597.8 548 61.7
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.7e-168 597.0 555 60.2
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 1.2e-166 590.9 509 64.4
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 1.9e-164 583.6 527 62.0
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 5.6e-164 582.0 553 60.6
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.1e-162 577.8 519 63.8
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 5.3e-162 575.5 504 62.9
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 1.2e-158 564.3 515 62.7
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 3.5e-158 562.8 514 61.5
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 6.6e-157 558.5 520 62.1
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 1.9e-156 557.0 511 62.2
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 4.3e-156 555.8 518 61.6
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 5.6e-156 555.4 579 57.0
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 1.3e-155 554.3 597 56.1
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 1.3e-155 554.3 597 56.1
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 1.6e-155 553.9 554 58.3
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 4.8e-155 552.4 548 58.8
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 4.0e-154 549.3 528 59.8
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 5.3e-154 548.9 498 63.1
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 8.4e-152 541.6 641 53.5
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 1.4e-151 540.8 526 60.1
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 7.4e-148 528.5 544 56.6
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 4.8e-147 525.8 529 58.0
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 5.8e-145 518.8 501 58.1
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 4.2e-143 512.7 565 52.4
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 4.6e-142 509.2 502 57.6
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 1.6e-139 500.7 540 55.7
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 4.1e-138 496.1 453 60.3
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 2.9e-136 490.0 563 51.7
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 4.2e-135 486.1 509 55.8
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 1.0e-133 481.5 520 54.8
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 7.4e-132 475.3 507 54.2
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 2.8e-131 473.4 530 53.8
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 2.4e-130 470.3 498 55.0
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 2.5e-127 460.3 510 54.5
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 6.1e-126 455.7 512 52.7
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 3.9e-125 453.0 413 63.7
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.1e-124 451.4 426 60.1
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 2.6e-121 440.3 469 53.9
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 5.9e-121 439.1 479 56.2
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 3.9e-117 426.4 498 50.2
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 8.8e-117 425.2 499 50.1
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 3.5e-113 413.3 498 48.2
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 4.5e-113 412.9 490 50.6
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 2.7e-110 403.7 505 52.9
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 3.3e-108 396.7 517 49.1
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 7.0e-106 389.0 510 49.8
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 3.5e-105 386.7 357 61.9
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 2.6e-100 370.5 517 48.9
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.7e-99 367.9 511 46.6
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 3.8e-96 356.7 537 45.4
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 1.1e-95 355.1 535 43.6
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 2.6e-92 344.0 544 41.7
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.5e-89 333.6 312 60.6
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.1e-87 328.6 338 56.8
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 1.9e-87 327.8 515 42.5
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 2.6e-84 317.4 559 39.0
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 1.1e-79 302.0 537 39.3
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 6.8e-77 292.7 300 56.3
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 5.8e-76 289.7 532 37.8
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 5.4e-74 283.1 228 65.8
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.2e-68 265.4 245 61.6
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 8.3e-67 259.2 440 40.0
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 3.4e-60 237.3 366 45.6
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 6.0e-57 226.5 522 33.7
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 5.6e-47 193.4 658 28.9
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 2.4e-42 177.9 562 32.0
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 6.2e-38 163.3 384 33.9
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 8.1e-38 162.9 141 62.4
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 1.6e-33 148.7 88 81.8
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 6.0e-25 120.2 131 53.4
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 1.8e-16 92.0 112 47.3
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 7.2e-10 70.1 98 39.8
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.6e-09 68.9 70 50.0
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 7.4e-07 60.1 71 53.5


User provided reference genes

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