Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G254800 Prunus persica HOM05D001431 ORTHO05D001268 1.8e-108 396.0 207 100.0
Manes.14G138600 Manihot esculenta HOM05D001431 ORTHO05D001268 3.2e-20 102.8 133 47.4
QL02p091314 Quercus lobata HOM05D001431 ORTHO05D001268 2.3e-18 96.7 165 41.8
FvH4_1g01721 Fragaria vesca HOM05D001431 ORTHO05D001268 3.9e-18 95.9 138 49.3
FAN19G1266 Fragaria x ananassa HOM05D001431 ORTHO05D001268 3.9e-18 95.9 138 49.3
RcHm_v2.0_Chr2g0086671 Rosa chinensis HOM05D001431 ORTHO05D001268 8.6e-18 94.7 174 39.7
QL02p091271 Quercus lobata HOM05D001431 ORTHO05D001268 3.3e-17 92.8 159 40.9
Thecc.09G141800 Theobroma cacao HOM05D001431 ORTHO05D001268 3.3e-17 92.8 185 36.2
TWI34G1362 Tripterygium wilfordii HOM05D001431 ORTHO05D001268 3.3e-17 92.8 183 38.8
Glyma.09G095800 Glycine max HOM05D001431 ORTHO05D001268 2.1e-16 90.1 151 39.7
Duzib168G0421 Durio zibethinus HOM05D001431 ORTHO05D001268 4.7e-16 89.0 186 37.6
Glyma.15G202100 Glycine max HOM05D001431 ORTHO05D001268 6.2e-16 88.6 152 41.4
Glyma.13G157400 Glycine max HOM05D001431 ORTHO05D001268 1.4e-15 87.4 154 40.9
MELO3C010262.2 Cucumis melo HOM05D001431 ORTHO05D001268 2.4e-15 86.7 183 37.2
TPR.G22802 Trifolium pratense HOM05D001431 ORTHO05D001268 2.4e-15 86.7 160 40.0
ClCG06G012050 Citrullus lanatus HOM05D001431 ORTHO05D001268 1.5e-14 84.0 172 39.0
Potri.018G114200 Populus trichocarpa HOM05D001431 ORTHO05D001268 2.0e-14 83.6 167 37.7
Ca_27061_v3 Cicer arietinum L. HOM05D001431 ORTHO05D001268 3.4e-14 82.8 162 39.5
Medtr2g461190 Medicago truncatula HOM05D001431 ORTHO05D001268 4.4e-14 82.4 162 36.4
Psat0ss25082g0080 Pisum sativum HOM05D001431 ORTHO05D001268 5.8e-14 82.0 161 37.9
VMungo1215G3003 Vigna mungo HOM05D001431 ORTHO05D001268 5.8e-14 82.0 110 46.4
Cfa020891 Carpinus fangiana HOM05D001431 ORTHO05D001268 7.6e-14 81.6 166 39.2
CsaV3_1G028510 Cucumis sativus L. HOM05D001431 ORTHO05D001268 7.6e-14 81.6 155 40.0
Duzib168G0286 Durio zibethinus HOM05D001431 ORTHO05D001268 1.3e-13 80.9 149 38.3
Haze_19319 Corylus avellana HOM05D001431 ORTHO05D001268 1.7e-13 80.5 164 39.0
Glyma.17G105000 Glycine max HOM05D001431 ORTHO05D001268 1.7e-13 80.5 157 38.9
Lj6g0025598 Lotus japonicus HOM05D001431 ORTHO05D001268 2.2e-13 80.1 153 37.3
Phvul.003G174800 Phaseolus vulgaris HOM05D001431 ORTHO05D001268 2.2e-13 80.1 114 44.7
arahy.Tifrunner.gnm1.ann1.KMWM4V Arachis hypogaea HOM05D001431 ORTHO05D001268 3.8e-13 79.3 132 43.2
Psat4g033120 Pisum sativum HOM05D001431 ORTHO05D001268 8.4e-13 78.2 130 38.5
Phvul.009G209600 Phaseolus vulgaris HOM05D001431 ORTHO05D001268 1.4e-12 77.4 125 39.2
Hma1.2p1_0182F.1_g080500 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 1.9e-12 77.0 179 35.2
TAR383G0017 Trochodendron aralioides HOM05D001431 ORTHO05D001268 1.9e-12 77.0 143 41.3
COL.COLO4_18913 Corchorus olitorius HOM05D001431 ORTHO05D001268 3.2e-12 76.3 149 38.3
PGR142G0349 Punica granatum HOM05D001431 ORTHO05D001268 3.2e-12 76.3 180 32.8
Medtr4g116530 Medicago truncatula HOM05D001431 ORTHO05D001268 5.4e-12 75.5 120 40.8
Hma1.2p1_0949F.1_g240600 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 1.2e-11 74.3 178 33.7
Gohir.A06G050000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 1.6e-11 73.9 134 38.1
Sabra06G0202700 Salix brachista HOM05D001431 ORTHO05D001268 2.1e-11 73.6 147 34.0
Gohir.A06G099800 Gossypium hirsutum HOM05D001431 ORTHO05D001268 2.7e-11 73.2 181 34.3
Gohir.D06G102000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 2.7e-11 73.2 185 34.1
Hma1.2p1_1784F.1_g302160 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 3.5e-11 72.8 178 33.1
VMungo1309G2763 Vigna mungo HOM05D001431 ORTHO05D001268 3.5e-11 72.8 83 49.4
Gorai.010G056200 Gossypium raimondii HOM05D001431 ORTHO05D001268 6.0e-11 72.0 134 37.3
Lalb_Chr07g0179511 Lupinus albus HOM05D001431 ORTHO05D001268 6.0e-11 72.0 161 34.8
Potri.006G259300 Populus trichocarpa HOM05D001431 ORTHO05D001268 1.0e-10 71.2 147 34.0
TPR.G15780 Trifolium pratense HOM05D001431 ORTHO05D001268 1.0e-10 71.2 134 38.8
Duzib187G1968 Durio zibethinus HOM05D001431 ORTHO05D001268 1.7e-10 70.5 188 31.9
Sabra18G0097100 Salix brachista HOM05D001431 ORTHO05D001268 1.7e-10 70.5 124 40.3
CANSAT11G0265 Cannabis sativa HOM05D001431 ORTHO05D001268 3.0e-10 69.7 93 48.4
Duzib187G1758 Durio zibethinus HOM05D001431 ORTHO05D001268 3.9e-10 69.3 149 36.2
Gorai.010G117000 Gossypium raimondii HOM05D001431 ORTHO05D001268 3.9e-10 69.3 108 38.9
Solyc07g007130.1 Solanum lycopersicum HOM05D001431 ORTHO05D001268 6.6e-10 68.6 174 35.1
CiPaw.15G181700 Carya illinoinensis HOM05D001431 ORTHO05D001268 1.1e-09 67.8 126 37.3
PGSC0003DMG400030698 Solanum tuberosum HOM05D001431 ORTHO05D001268 1.5e-09 67.4 89 44.9
TAR626G1912 Trochodendron aralioides HOM05D001431 ORTHO05D001268 1.9e-09 67.0 171 36.8
Eucgr.C00435 Eucalyptus grandis HOM05D001431 ORTHO05D001268 3.3e-09 66.2 168 34.5
Peaxi162Scf00391g00002 Petunia axillaris HOM05D001431 ORTHO05D001268 3.3e-09 66.2 88 43.2
Sed0026439 Sechium edule HOM05D001431 ORTHO05D001268 4.3e-09 65.9 136 35.3
COL.COLO4_24101 Corchorus olitorius HOM05D001431 ORTHO05D001268 5.6e-09 65.5 91 41.8
MBI15_g10642_MAGBIO Magnolia biondii HOM05D001431 ORTHO05D001268 5.6e-09 65.5 136 33.8
Sopen07g003180 Solanum pennellii HOM05D001431 ORTHO05D001268 5.6e-09 65.5 89 43.8
Manes.16G126000 Manihot esculenta HOM05D001431 ORTHO05D001268 9.6e-09 64.7 121 34.7
Potri.006G190100 Populus trichocarpa HOM05D001431 ORTHO05D001268 9.6e-09 64.7 141 33.3
QL02p091284 Quercus lobata HOM05D001431 ORTHO05D001268 1.2e-08 64.3 126 35.7
Ciclev10010491m.g Citrus clementina HOM05D001431 ORTHO05D001268 2.1e-08 63.5 153 34.0
Nitab4.5_0011752g0010 Nicotiana tabacum HOM05D001431 ORTHO05D001268 2.1e-08 63.5 105 36.2
Oeu042713.1 Olea europaea HOM05D001431 ORTHO05D001268 4.7e-08 62.4 168 33.9
CSS0009490 Camellia sinensis var. sinensis HOM05D001431 ORTHO05D001268 1.4e-07 60.8 148 32.4
Lalb_Chr11g0072871 Lupinus albus HOM05D001431 ORTHO05D001268 1.4e-07 60.8 162 32.7
Ah.09g223880 Amaranthus hybridus HOM05D001431 ORTHO05D001268 1.8e-07 60.5 136 34.6
Manes.03G011900 Manihot esculenta HOM05D001431 ORTHO05D001268 3.1e-07 59.7 117 35.0
Nn8g39717 Nelumbo nucifera HOM05D001431 ORTHO05D001268 4.0e-07 59.3 126 34.1
Actinidia14101 Actinidia chinensis HOM05D001431 ORTHO05D001268 6.9e-07 58.5 111 38.7
CAN.G518.20 Capsicum annuum HOM05D001431 ORTHO05D001268 6.9e-07 58.5 86 43.0
Peaxi162Scf01184g00111 Petunia axillaris HOM05D001431 ORTHO05D001268 9.0e-07 58.2 147 29.3
Cc06_g07420 Coffea canephora HOM05D001431 ORTHO05D001268 1.2e-06 57.8 125 34.4
Atru.chr7.261 Acer truncatum HOM05D001431 ORTHO05D001268 1.5e-06 57.4 95 38.9
AUR62041452 Chenopodium quinoa HOM05D001431 ORTHO05D001268 2.0e-06 57.0 133 34.6
Peaxi162Scf00108g00002 Petunia axillaris HOM05D001431 ORTHO05D001268 2.0e-06 57.0 147 29.3
Ah.14g078760 Amaranthus hybridus HOM05D001431 ORTHO05D001268 2.6e-06 56.6 145 31.7
Migut.K00377 Erythranthe guttata HOM05D001431 ORTHO05D001268 2.6e-06 56.6 95 33.7
Lsat_1_v5_gn_8_63180 Lactuca sativa HOM05D001431 ORTHO05D001268 2.6e-06 56.6 166 30.1
AUR62011255 Chenopodium quinoa HOM05D001431 ORTHO05D001268 3.4e-06 56.2 133 33.8
Peaxi162Scf01184g00110 Petunia axillaris HOM05D001431 ORTHO05D001268 3.4e-06 56.2 145 29.0
Sc18g0000050 Simmondsia chinensis HOM05D001431 ORTHO05D001268 4.4e-06 55.8 125 31.2
Peaxi162Scf00108g00003 Petunia axillaris HOM05D001431 ORTHO05D001268 5.8e-06 55.5 82 36.6
Rhsim03G0254500 Rhododendron simsii HOM05D001431 ORTHO05D001268 5.8e-06 55.5 177 35.0
ECA236G0145 Erigeron canadensis HOM05D001431 ORTHO05D001268 7.6e-06 55.1 107 33.6
unitig_62.g23460 Utricularia gibba HOM05D001431 ORTHO05D001268 7.6e-06 55.1 85 43.5
Prupe.1G486100 Prunus persica HOM05D001431 ORTHO05D001268 9.9e-06 54.7 146 33.6


User provided reference genes

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