Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 6.5e-265 916.8 442 100.0
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 1.1e-211 740.0 424 84.7
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 3.8e-196 688.3 422 79.6
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 3.1e-190 668.7 422 77.3
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 2.6e-189 665.6 402 79.4
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 6.7e-185 651.0 427 73.5
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.5e-181 639.8 448 71.9
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 8.4e-180 634.0 430 70.5
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 9.3e-179 630.6 407 74.7
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 1.8e-177 626.3 432 70.6
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 1.6e-175 619.8 425 71.3
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 1.1e-174 617.1 407 74.7
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 3.4e-173 612.1 424 70.0
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 1.6e-170 603.2 426 69.5
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 7.9e-170 600.9 417 71.0
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 1.4e-169 600.1 399 71.7
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 3.7e-167 592.0 408 69.6
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 6.3e-167 591.3 399 70.7
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 8.2e-167 590.9 422 67.3
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 8.2e-167 590.9 403 68.7
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 1.8e-166 589.7 412 70.1
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 3.1e-166 589.0 422 66.6
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 3.1e-166 589.0 402 70.4
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 2.6e-165 585.9 425 67.1
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 4.5e-165 585.1 434 65.4
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 2.2e-164 582.8 425 66.8
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 3.8e-164 582.0 423 66.2
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 6.5e-164 581.3 399 68.2
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 1.1e-163 580.5 406 68.7
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 3.2e-163 578.9 424 66.3
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 3.2e-163 578.9 425 66.6
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 4.2e-163 578.6 409 68.7
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 1.0e-161 573.9 406 67.0
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 3.0e-161 572.4 411 68.6
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 5.7e-160 568.2 397 68.3
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 1.1e-158 563.9 425 65.6
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 2.4e-158 562.8 428 63.8
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 2.0e-157 559.7 416 64.9
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 7.7e-157 557.8 431 63.1
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 2.9e-156 555.8 429 62.7
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 5.0e-156 555.1 423 65.0
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 2.1e-154 549.7 402 65.9
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 3.6e-154 548.9 422 62.6
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 1.0e-153 547.4 436 62.4
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 3.0e-153 545.8 428 63.8
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 5.2e-153 545.0 424 62.3
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 1.1e-152 543.9 411 62.8
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 1.5e-152 543.5 430 62.1
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 1.5e-152 543.5 437 61.8
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 1.5e-152 543.5 425 62.6
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 4.4e-152 542.0 424 61.6
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 1.3e-151 540.4 401 63.1
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 1.7e-151 540.0 403 65.3
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 2.2e-151 539.7 427 61.4
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 2.2e-151 539.7 405 64.7
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 6.3e-151 538.1 424 61.3
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 1.1e-150 537.3 409 64.5
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 1.4e-150 537.0 436 60.6
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 5.3e-150 535.0 396 62.9
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.6e-149 533.5 430 60.7
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.0e-148 530.8 423 62.2
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 2.9e-148 529.3 437 60.2
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 5.0e-148 528.5 373 68.4
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 5.0e-148 528.5 401 62.6
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 5.0e-148 528.5 401 62.6
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 8.5e-148 527.7 395 63.5
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 3.2e-147 525.8 411 61.8
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 4.2e-147 525.4 446 57.0
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 5.5e-147 525.0 432 59.5
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 7.2e-147 524.6 423 60.8
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 8.0e-146 521.2 430 60.0
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 1.8e-145 520.0 413 60.0
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 1.8e-145 520.0 410 61.2
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 1.3e-143 513.8 427 60.2
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 8.5e-140 501.1 410 60.2
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 6.1e-138 495.0 411 59.1
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 8.0e-138 494.6 442 54.8
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 3.0e-137 492.7 423 57.4
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 4.0e-137 492.3 290 79.3
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 6.8e-137 491.5 428 57.0
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 2.6e-136 489.6 418 56.2
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 1.6e-133 480.3 396 58.6
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 1.7e-132 476.9 418 55.5
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 7.2e-131 471.5 393 58.5
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 6.8e-129 464.9 360 62.8
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 4.4e-128 462.2 419 54.7
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 2.8e-127 459.5 395 57.0
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 4.1e-126 455.7 360 61.7
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 7.0e-126 454.9 303 67.7
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 5.0e-124 448.7 398 56.0
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 1.6e-122 443.7 417 53.7
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 2.6e-120 436.4 294 69.0
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 1.5e-115 420.6 367 55.3
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 1.2e-112 411.0 376 52.9
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 5.4e-110 402.1 302 63.6
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 1.3e-100 370.9 411 45.0
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 5.1e-92 342.4 397 47.4
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 7.9e-61 238.8 308 39.6
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 1.4e-57 228.0 286 44.1
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 2.1e-53 214.2 127 76.4
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 3.0e-52 210.3 528 30.3
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 3.1e-49 200.3 396 34.6
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 4.1e-41 173.3 198 44.9
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 1.3e-31 141.7 88 77.3
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 4.4e-27 126.7 519 25.8
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 8.8e-20 102.4 101 50.5
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 8.8e-20 102.4 94 53.2
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 2.2e-18 97.8 79 62.0
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 2.4e-17 94.4 270 27.0
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.2e-09 67.4 41 73.2
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 2.7e-08 64.3 44 61.4


User provided reference genes

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