Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 0.0e+00 1590.5 833 100.0
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 0.0e+00 1417.1 838 88.7
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 0.0e+00 1399.4 832 87.9
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 0.0e+00 1326.2 818 84.4
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 0.0e+00 1310.8 839 82.2
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 0.0e+00 1310.4 839 82.1
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 0.0e+00 1301.2 838 81.5
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 0.0e+00 1300.0 839 81.6
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 0.0e+00 1172.1 920 69.9
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.1e-305 1053.1 838 67.7
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 1.2e-304 1049.7 845 67.9
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 3.9e-295 1018.1 863 65.0
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 1.9e-289 999.2 978 57.9
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 3.2e-289 998.4 854 64.2
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 2.3e-287 992.3 860 64.2
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 2.3e-287 992.3 855 63.9
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 6.3e-285 984.2 859 63.4
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 1.8e-284 982.6 856 63.3
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 3.1e-284 981.9 852 63.5
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 1.3e-282 976.5 859 63.3
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 1.1e-281 973.4 856 62.4
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 1.9e-281 972.6 858 62.9
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 1.6e-280 969.5 866 61.9
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.8e-279 966.1 859 62.3
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 3.0e-279 965.3 858 62.9
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 5.1e-279 964.5 831 63.9
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.7e-277 959.5 852 62.3
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 2.8e-277 958.7 862 62.4
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 1.8e-276 956.1 860 62.1
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 3.1e-276 955.3 893 60.4
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.5e-275 953.0 863 61.8
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.9e-274 948.7 853 62.1
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.9e-274 948.7 835 62.0
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 1.9e-273 946.0 832 61.8
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 6.1e-272 941.0 831 61.7
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.0e-271 940.3 860 62.0
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.8e-271 939.5 849 60.2
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 3.9e-271 938.3 858 61.5
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.0e-270 936.0 862 60.9
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 3.3e-270 935.3 859 61.2
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 7.4e-270 934.1 858 61.4
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 4.8e-269 931.4 848 59.4
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.3e-269 931.0 860 61.5
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 8.2e-269 930.6 854 61.4
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.8e-268 929.5 848 59.6
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 5.9e-267 924.5 850 60.8
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.9e-265 919.5 863 59.2
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.2e-264 916.8 860 61.0
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 1.2e-264 916.8 857 60.0
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 1.2e-264 916.8 859 60.2
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 9.7e-262 907.1 859 59.1
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.0e-260 901.0 825 61.7
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.4e-255 886.7 717 67.8
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 4.0e-255 885.2 852 59.3
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 6.8e-255 884.4 975 53.1
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 1.5e-254 883.2 889 56.4
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.3e-253 880.2 840 58.7
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 6.1e-248 861.3 815 59.5
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 2.2e-245 852.8 845 57.6
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 2.2e-245 852.8 862 57.2
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 2.8e-245 852.4 862 57.8
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 1.1e-244 850.5 833 57.5
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.1e-241 840.5 856 57.8
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.6e-230 802.7 871 53.5
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 1.2e-227 793.9 862 53.5
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 6.0e-227 791.6 873 52.7
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 1.0e-226 790.8 857 53.3
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.5e-225 786.9 855 53.6
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 5.6e-225 785.0 855 53.6
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 1.6e-224 783.5 865 53.6
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 3.6e-224 782.3 865 53.5
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.8e-223 780.0 800 55.0
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 2.3e-223 779.6 847 54.1
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 5.2e-223 778.5 866 53.5
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 7.5e-222 774.6 851 53.0
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 2.1e-219 766.5 650 64.5
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 2.1e-219 766.5 840 53.1
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 3.5e-219 765.8 843 52.6
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 6.0e-219 765.0 853 53.2
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 7.8e-219 764.6 855 52.9
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 3.0e-218 762.7 828 52.5
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.0e-218 762.7 990 46.2
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 6.6e-218 761.5 830 52.5
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 5.6e-217 758.4 854 51.8
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.4e-215 753.8 861 51.0
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 1.5e-214 750.4 709 58.8
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 2.6e-214 749.6 832 52.8
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.4e-212 743.8 844 51.8
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.4e-212 743.8 864 50.8
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 3.5e-211 739.2 824 51.9
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 4.6e-211 738.8 873 50.6
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 1.0e-210 737.6 825 51.9
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 1.3e-210 737.3 860 51.5
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 1.5e-209 733.8 840 51.1
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 9.6e-209 731.1 835 51.1
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.8e-208 729.6 840 52.1
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.2e-207 725.3 863 51.0
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 7.6e-206 721.5 654 63.0
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 9.9e-206 721.1 836 51.3
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 3.2e-204 716.1 836 50.6
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 7.8e-203 711.4 832 50.5
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.9e-202 709.1 703 57.3
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 7.3e-201 704.9 843 51.4
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 2.1e-200 703.4 833 50.2
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 1.1e-199 701.0 830 50.6
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 2.0e-198 696.8 891 48.1
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 2.9e-197 693.0 851 48.9
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 4.9e-197 692.2 836 48.3
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 1.6e-195 687.2 844 50.0
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 6.0e-195 685.3 855 50.4
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.3e-194 684.1 648 58.5
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 1.9e-193 680.2 847 48.6
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 9.6e-193 677.9 649 58.2
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 3.7e-192 676.0 824 49.0
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 1.5e-190 670.6 833 48.3
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 8.2e-184 648.3 675 55.9
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 1.1e-183 647.9 945 45.0
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.4e-183 647.5 819 47.4
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 1.2e-182 644.4 846 47.8
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 1.5e-182 644.0 852 47.7
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 4.6e-179 632.5 829 46.1
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 2.0e-174 617.1 621 56.8
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 4.5e-174 615.9 823 45.3
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 2.9e-173 613.2 841 44.6
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.3e-170 604.4 829 45.6
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.9e-169 600.5 649 52.2
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 2.9e-165 586.6 655 53.1
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 2.1e-163 580.5 830 44.0
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.8e-162 577.4 823 42.4
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 2.0e-161 573.9 825 44.5
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 1.3e-160 571.2 826 42.5
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 1.2e-158 564.7 655 51.1
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 2.7e-155 553.5 817 42.5
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.7e-152 544.3 877 40.7
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 2.5e-148 530.4 650 49.5
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 2.6e-145 520.4 569 53.4
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 5.7e-145 519.2 880 41.4
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 2.8e-144 516.9 574 52.6
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 1.2e-137 495.0 900 38.4
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 2.0e-129 467.6 774 39.7
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 3.5e-126 456.8 858 36.0
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.5e-124 451.4 824 38.0
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.0e-122 445.3 560 45.9
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 5.2e-122 443.0 754 42.0
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 2.2e-120 437.6 819 36.8
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 1.1e-119 435.3 667 45.3
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.9e-116 424.5 438 54.3
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 4.3e-100 370.2 467 46.5
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 1.3e-75 288.9 807 32.2
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 9.3e-71 272.7 684 32.0
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.5e-68 265.4 434 42.6
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 7.9e-54 216.5 313 43.1
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 4.1e-50 204.1 262 46.2
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 4.1e-50 204.1 348 39.9
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 3.8e-48 197.6 196 56.6
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 7.2e-47 193.4 224 47.8
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 5.7e-44 183.7 196 48.5
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.2e-43 181.8 118 71.2
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.0e-40 172.9 305 35.1
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 4.2e-39 167.5 327 38.5
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.1e-38 165.2 262 42.4
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 2.8e-35 154.8 233 41.6
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 1.6e-33 149.1 148 56.1
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 1.9e-31 142.1 117 65.8
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 9.4e-31 139.8 218 38.1
MD02G1023900 Malus domestica HOM05D003622 ORTHO05D048666 5.2e-29 134.0 94 80.9
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 2.6e-28 131.7 142 52.1
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 3.8e-24 117.9 122 54.9
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.4e-18 99.4 120 44.2
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.4e-18 98.6 162 40.7
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.2e-17 96.3 68 66.2
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.0e-17 95.5 105 51.4
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 3.8e-16 91.3 109 45.9
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 3.8e-16 91.3 111 48.6
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.2e-14 86.3 148 38.5
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 8.9e-13 80.1 69 56.5
RcHm_v2.0_Chr5g0023731 Rosa chinensis HOM05D003622 ORTHO05D048666 9.8e-12 76.6 60 71.7
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 9.8e-12 76.6 87 42.5
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 2.8e-11 75.1 98 39.8
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.4e-10 72.8 136 40.4
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 2.4e-10 72.0 98 38.8
MD15G1167300 Malus domestica HOM05D003622 ORTHO05D247863 1.9e-07 62.4 43 83.7
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.5e-07 62.0 138 35.5
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-06 59.3 54 42.6
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 1.6e-06 59.3 42 61.9


User provided reference genes

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