Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 4.4e-58 227.6 106 100.0
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.6e-47 192.6 106 83.0
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.0e-46 189.9 106 81.1
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 2.2e-46 188.7 106 78.3
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 2.2e-46 188.7 106 78.3
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 5.0e-46 187.6 106 77.4
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 5.0e-46 187.6 106 77.4
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 6.5e-46 187.2 106 77.4
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 7.2e-45 183.7 105 74.3
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 1.5e-42 176.0 106 71.7
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.4e-42 174.9 103 70.9
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 5.7e-42 174.1 106 71.7
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 5.7e-42 174.1 106 70.8
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 9.8e-42 173.3 106 70.8
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 2.2e-41 172.2 106 69.8
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 6.3e-41 170.6 106 70.8
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 6.3e-41 170.6 103 71.8
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 6.3e-41 170.6 105 71.4
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 6.3e-41 170.6 103 72.8
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 8.3e-41 170.2 106 68.9
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 8.3e-41 170.2 106 69.8
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 1.1e-40 169.9 103 71.8
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.1e-40 169.9 105 67.6
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.4e-40 169.5 106 70.8
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 2.4e-40 168.7 106 71.7
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 4.1e-40 167.9 106 70.8
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 5.4e-40 167.5 104 69.2
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 5.4e-40 167.5 106 70.8
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.2e-39 166.4 103 66.0
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 1.6e-39 166.0 106 69.8
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 5.9e-39 164.1 103 68.0
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 7.8e-39 163.7 102 66.7
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 1.0e-38 163.3 101 71.3
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 1.7e-38 162.5 103 68.9
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.7e-38 162.5 103 68.9
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 1.7e-38 162.5 104 67.3
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 1.7e-38 162.5 104 66.3
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 3.8e-38 161.4 101 67.3
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 3.8e-38 161.4 106 67.0
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 5.0e-38 161.0 102 68.6
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 5.0e-38 161.0 102 68.6
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 5.0e-38 161.0 106 67.0
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 6.6e-38 160.6 101 67.3
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 6.6e-38 160.6 101 67.3
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.5e-37 159.5 103 66.0
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 3.3e-37 158.3 104 67.3
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 3.3e-37 158.3 105 64.8
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 7.3e-37 157.1 101 67.3
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 3.6e-36 154.8 99 67.7
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 4.7e-36 154.5 100 66.0
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.4e-35 152.9 101 64.4
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 1.8e-35 152.5 101 63.4
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 4.0e-35 151.4 91 74.7
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 4.0e-35 151.4 91 74.7
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.2e-35 151.0 89 70.8
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 6.8e-35 150.6 103 63.1
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 8.9e-35 150.2 101 63.4
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.2e-34 149.8 102 64.7
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.5e-34 149.4 91 72.5
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 2.0e-34 149.1 92 66.3
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 2.0e-34 149.1 97 72.2
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 2.6e-34 148.7 101 62.4
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 4.4e-34 147.9 83 74.7
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 9.8e-34 146.7 104 63.5
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 1.3e-33 146.4 93 69.9
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 6.4e-33 144.1 102 60.8
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.4e-32 142.9 103 59.2
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.8e-32 142.5 100 62.0
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 5.4e-32 141.0 104 57.7
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.2e-31 139.8 123 56.1
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.0e-31 139.0 104 58.7
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 2.7e-31 138.7 100 56.0
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 2.7e-31 138.7 106 58.5
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 5.9e-31 137.5 101 56.4
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 1.0e-30 136.7 101 59.4
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 1.0e-30 136.7 101 59.4
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.1e-29 133.3 102 56.9
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.1e-29 133.3 106 55.7
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.1e-29 133.3 106 55.7
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 5.6e-29 131.0 63 79.4
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 7.3e-29 130.6 103 56.3
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 9.5e-29 130.2 103 58.3
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.2e-28 129.8 83 65.1
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 4.7e-28 127.9 98 56.1
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 8.0e-28 127.1 103 55.3
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 5.2e-27 124.4 91 60.4
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 8.9e-27 123.6 99 51.5
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.2e-26 123.2 93 59.1
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 2.0e-26 122.5 102 52.9
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 2.0e-26 122.5 103 54.4
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 7.5e-26 120.6 89 59.6
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 7.5e-26 120.6 103 52.4
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.3e-25 119.8 75 62.7
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 2.2e-25 119.0 103 53.4
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 3.7e-25 118.2 100 48.0
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 1.1e-24 116.7 94 50.0
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 5.4e-24 114.4 100 50.0
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 3.5e-23 111.7 101 47.5
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 4.6e-23 111.3 99 52.5
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 7.8e-23 110.5 100 49.0
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 5.0e-22 107.8 63 63.5
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 5.0e-22 107.8 61 72.1
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 9.5e-21 103.6 91 56.0
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.6e-20 102.8 107 45.8
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 3.6e-20 101.7 91 50.5
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.8e-19 99.4 107 44.9
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 3.4e-18 95.1 111 42.3
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 7.1e-16 87.4 43 81.4
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 1.6e-12 76.3 100 38.0
QL03p062338 Quercus lobata HOM05D007077 ORTHO05D008853 4.7e-12 74.7 59 66.1
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 5.8e-10 67.8 98 33.7


User provided reference genes

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