Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 8.6e-168 593.6 300 100.0
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 4.7e-142 508.1 307 80.5
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 3.3e-127 458.8 309 77.3
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 1.6e-126 456.4 301 76.4
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 3.8e-123 445.3 301 76.7
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.6e-121 439.9 301 76.4
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 2.7e-121 439.1 301 75.4
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 5.1e-120 434.9 301 75.4
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 6.9e-117 424.5 309 72.5
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 1.9e-111 406.4 304 67.8
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 8.2e-110 401.0 305 65.9
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 1.4e-109 400.2 310 68.1
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 7.2e-106 387.9 305 69.8
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 1.0e-104 384.0 308 67.5
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 1.3e-104 383.6 305 68.5
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 3.9e-104 382.1 306 65.0
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 6.7e-104 381.3 304 63.5
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 2.8e-102 375.9 303 67.0
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 6.3e-102 374.8 306 66.7
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 8.2e-102 374.4 306 65.7
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 8.2e-102 374.4 305 66.2
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.4e-101 373.6 306 66.0
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 2.4e-101 372.9 321 65.1
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 5.5e-98 361.7 303 62.7
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 8.8e-96 354.4 313 63.9
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 1.1e-95 354.0 295 65.8
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 7.4e-95 351.3 322 63.0
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 9.7e-95 350.9 312 62.5
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 2.6e-92 342.8 306 63.7
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 5.9e-92 341.7 312 60.6
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 7.7e-92 341.3 307 64.8
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 1.0e-91 340.9 306 63.7
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 1.7e-91 340.1 309 60.2
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 1.4e-90 337.0 303 59.4
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 3.6e-89 332.4 302 58.6
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 1.4e-88 330.5 301 60.5
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 2.3e-88 329.7 308 58.8
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 6.7e-88 328.2 307 60.9
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 8.8e-88 327.8 301 60.1
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 2.0e-87 326.6 355 56.1
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 2.6e-87 326.2 306 62.4
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 2.6e-87 326.2 302 59.9
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 1.7e-86 323.6 319 56.7
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 1.7e-86 323.6 319 56.7
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 1.7e-86 323.6 309 61.8
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 2.2e-86 323.2 318 57.5
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 4.8e-86 322.0 295 58.3
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 4.1e-85 318.9 293 58.7
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 5.3e-85 318.5 320 56.6
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 1.6e-84 317.0 307 59.6
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 4.5e-84 315.5 311 57.9
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 4.5e-84 315.5 297 59.9
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 2.1e-81 306.6 303 58.4
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 1.8e-80 303.5 251 62.5
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 4.0e-80 302.4 300 58.7
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.3e-78 297.4 320 53.4
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 2.2e-78 296.6 307 55.4
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 8.2e-78 294.7 232 70.3
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 7.0e-77 291.6 335 52.5
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 1.2e-76 290.8 379 48.8
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 8.5e-75 284.6 317 55.8
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 2.5e-74 283.1 292 53.4
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 2.5e-74 283.1 332 53.9
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 3.2e-74 282.7 297 56.2
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 7.2e-74 281.6 286 54.9
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 2.1e-73 280.0 295 57.6
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 1.0e-72 277.7 312 53.2
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 1.4e-72 277.3 307 59.3
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 4.0e-72 275.8 295 57.6
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 4.0e-72 275.8 295 57.6
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 7.5e-71 271.6 303 49.8
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 3.7e-70 269.2 307 53.4
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 4.8e-70 268.9 312 50.6
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 1.8e-69 266.9 340 51.2
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 1.8e-69 266.9 314 50.6
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 5.4e-69 265.4 353 48.2
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 1.1e-66 257.7 275 52.7
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 3.6e-65 252.7 323 52.0
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 2.3e-64 250.0 293 49.5
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 5.2e-64 248.8 330 50.6
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.5e-63 247.3 344 46.8
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 1.5e-63 247.3 330 50.6
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 2.0e-63 246.9 316 49.4
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 2.8e-62 243.0 223 60.5
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 9.2e-61 238.0 340 45.9
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 2.7e-60 236.5 278 53.2
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 5.0e-59 232.3 172 71.5
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 7.3e-58 228.4 306 48.7
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 9.5e-58 228.0 311 47.9
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 7.0e-53 211.8 316 45.6
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 5.6e-50 202.2 302 45.0
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 1.8e-48 197.2 199 52.8
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 8.9e-48 194.9 322 44.4
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 9.8e-47 191.4 288 47.6
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 3.2e-45 186.4 320 44.1
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 2.0e-44 183.7 326 46.9
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 7.8e-44 181.8 323 42.7
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 2.1e-41 173.7 325 43.7
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 3.6e-41 172.9 332 41.6
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 6.2e-41 172.2 318 42.8
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 2.3e-40 170.2 236 50.0
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 2.6e-39 166.8 234 47.0
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 1.1e-37 161.4 322 41.3
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 5.4e-37 159.1 289 44.3
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.7e-35 154.1 305 41.0
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 1.2e-33 147.9 314 41.1
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 4.4e-31 139.4 284 42.3
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 1.3e-30 137.9 326 41.1
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 1.7e-30 137.5 313 39.0
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 1.7e-30 137.5 316 40.2
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 4.9e-30 136.0 301 41.9
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 6.4e-30 135.6 311 36.7
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 6.4e-30 135.6 326 36.8
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 8.4e-30 135.2 113 59.3
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 3.9e-27 126.3 283 41.7
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 6.6e-27 125.6 276 39.1
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 1.2e-25 121.3 307 37.5
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 1.6e-25 120.9 316 38.0
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 1.6e-25 120.9 316 38.0
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.6e-25 120.9 282 37.9
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 1.4e-24 117.9 286 38.8
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 1.4e-24 117.9 314 36.0
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 2.0e-23 114.0 329 36.5
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 4.3e-18 96.3 319 34.5
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 4.9e-14 82.8 141 39.7
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 1.6e-12 77.8 241 34.9
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 8.7e-11 72.0 135 41.5
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 1.5e-10 71.2 297 28.3
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 3.6e-09 66.6 153 34.6
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 1.1e-08 65.1 37 70.3


User provided reference genes

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