Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G230000 Prunus persica HOM05D008067 ORTHO05D010226 3.9e-38 161.0 82 100.0
MD02G1048100 Malus domestica HOM05D008067 ORTHO05D010226 7.3e-29 130.2 81 77.8
Gorai.010G070100 Gossypium raimondii HOM05D008067 ORTHO05D010226 7.1e-24 113.6 83 80.7
COL.COLO4_34910 Corchorus olitorius HOM05D008067 ORTHO05D010226 2.7e-23 111.7 87 74.7
Gohir.D06G060201 Gossypium hirsutum HOM05D008067 ORTHO05D010226 3.5e-23 111.3 83 77.1
Thecc.09G111500 Theobroma cacao HOM05D008067 ORTHO05D010226 6.0e-23 110.5 84 79.8
Gohir.A07G006600 Gossypium hirsutum HOM05D008067 ORTHO05D010226 6.7e-22 107.1 82 75.6
Gohir.D07G005400 Gossypium hirsutum HOM05D008067 ORTHO05D010226 6.7e-22 107.1 82 75.6
Gorai.001G004900 Gossypium raimondii HOM05D008067 ORTHO05D010226 6.7e-22 107.1 82 75.6
Cfa003263 Carpinus fangiana HOM05D008067 ORTHO05D010226 1.5e-21 105.9 84 75.0
QL02p085507 Quercus lobata HOM05D008067 ORTHO05D010226 1.9e-21 105.5 81 77.8
Gohir.A06G061900 Gossypium hirsutum HOM05D008067 ORTHO05D010226 2.5e-21 105.1 83 75.9
Haze_25708 Corylus avellana HOM05D008067 ORTHO05D010226 4.3e-21 104.4 84 73.8
TAR624G0725 Trochodendron aralioides HOM05D008067 ORTHO05D010226 2.1e-20 102.1 78 73.1
RcHm_v2.0_Chr2g0090561 Rosa chinensis HOM05D008067 ORTHO05D010226 9.0e-19 96.7 85 71.8
CsaV3_2G002290 Cucumis sativus L. HOM05D008067 ORTHO05D010226 5.8e-18 94.0 84 67.9
Sed0012648 Sechium edule HOM05D008067 ORTHO05D010226 1.3e-17 92.8 80 68.8
MELO3C004555.2 Cucumis melo HOM05D008067 ORTHO05D010226 1.7e-17 92.4 84 67.9
FAN28G1234 Fragaria x ananassa HOM05D008067 ORTHO05D010226 1.7e-17 92.4 87 67.8
Atru.chr7.1341 Acer truncatum HOM05D008067 ORTHO05D010226 2.2e-17 92.0 88 68.2
ClCG11G002490 Citrullus lanatus HOM05D008067 ORTHO05D010226 2.9e-17 91.7 77 70.1
FvH4_1g04950 Fragaria vesca HOM05D008067 ORTHO05D010226 3.8e-17 91.3 87 70.1
Manes.03G019700 Manihot esculenta HOM05D008067 ORTHO05D010226 1.4e-16 89.4 87 71.3
FAN23G0784 Fragaria x ananassa HOM05D008067 ORTHO05D010226 3.2e-16 88.2 87 67.8
TPR.G21702 Trifolium pratense HOM05D008067 ORTHO05D010226 5.5e-16 87.4 78 60.3
TPR.G23486 Trifolium pratense HOM05D008067 ORTHO05D010226 5.5e-16 87.4 78 60.3
Sed0011788 Sechium edule HOM05D008067 ORTHO05D010226 9.3e-16 86.7 86 62.8
CiPaw.04G164800 Carya illinoinensis HOM05D008067 ORTHO05D010226 1.6e-15 85.9 80 67.5
CiPaw.03G232800 Carya illinoinensis HOM05D008067 ORTHO05D010226 7.9e-15 83.6 84 60.7
CSS0009961 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 1.3e-14 82.8 84 61.9
CSS0037112 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 1.3e-14 82.8 84 61.9
Aqoxy7G01692 Aquilegia oxysepala HOM05D008067 ORTHO05D010226 1.8e-14 82.4 93 60.2
Potri.018G079200 Populus trichocarpa HOM05D008067 ORTHO05D010226 1.5e-13 79.3 88 60.2
Ciclev10010044m.g Citrus clementina HOM05D008067 ORTHO05D010226 2.5e-13 78.6 88 60.2
Nn8g39208 Nelumbo nucifera HOM05D008067 ORTHO05D010226 5.7e-13 77.4 86 59.3
Peaxi162Scf00560g00114 Petunia axillaris HOM05D008067 ORTHO05D010226 5.7e-13 77.4 91 53.8
RhsimUnG0085400 Rhododendron simsii HOM05D008067 ORTHO05D010226 5.7e-13 77.4 75 57.3
Lalb_Chr22g0352831 Lupinus albus HOM05D008067 ORTHO05D010226 7.4e-13 77.0 80 60.0
Psat7g013560 Pisum sativum HOM05D008067 ORTHO05D010226 9.6e-13 76.6 72 56.9
Ah.09g227900 Amaranthus hybridus HOM05D008067 ORTHO05D010226 1.3e-12 76.3 58 70.7
PGSC0003DMG400000315 Solanum tuberosum HOM05D008067 ORTHO05D010226 4.8e-12 74.3 88 56.8
Nitab4.5_0003537g0010 Nicotiana tabacum HOM05D008067 ORTHO05D010226 6.2e-12 73.9 87 57.5
HPP92_010803 Vanilla planifolia HOM05D008067 ORTHO05D010226 6.2e-12 73.9 68 55.9
Lsat_1_v5_gn_8_95580 Lactuca sativa HOM05D008067 ORTHO05D010226 1.1e-11 73.2 63 65.1
Medtr8g083450 Medicago truncatula HOM05D008067 ORTHO05D010226 1.1e-11 73.2 73 64.4
EL10Ac8g18505 Beta vulgaris HOM05D008067 ORTHO05D010226 1.8e-11 72.4 82 54.9
Medtr6g086485 Medicago truncatula HOM05D008067 ORTHO05D010226 1.8e-11 72.4 75 53.3
DCAR_028716 Daucus carota HOM05D008067 ORTHO05D010226 2.4e-11 72.0 70 58.6
Sopen12g003050 Solanum pennellii HOM05D008067 ORTHO05D010226 2.4e-11 72.0 81 55.6
Glyma.09G190000 Glycine max HOM05D008067 ORTHO05D010226 4.0e-11 71.2 74 55.4
Nn2g11761 Nelumbo nucifera HOM05D008067 ORTHO05D010226 5.3e-11 70.9 79 57.0
TPR.G35272 Trifolium pratense HOM05D003111 ORTHO05D003502 5.3e-11 70.9 65 58.5
Lj2g0006280 Lotus japonicus HOM05D008067 ORTHO05D010226 9.0e-11 70.1 79 53.2
Phvul.004G162800 Phaseolus vulgaris HOM05D008067 ORTHO05D010226 9.0e-11 70.1 77 53.2
Glyma.07G086900 Glycine max HOM05D008067 ORTHO05D010226 1.5e-10 69.3 72 55.6
Solyc12g007060.1 Solanum lycopersicum HOM05D008067 ORTHO05D010226 2.0e-10 68.9 89 50.6
SHI02746 Sapria himalayana HOM05D008067 ORTHO05D010226 3.4e-10 68.2 73 56.2
Lalb_Chr05g0222841 Lupinus albus HOM05D008067 ORTHO05D010226 1.3e-09 66.2 75 53.3
Psat1g041240 Pisum sativum HOM05D008067 ORTHO05D010226 5.0e-09 64.3 77 51.9
Peaxi162Scf00546g00115 Petunia axillaris HOM05D008067 ORTHO05D010226 1.9e-08 62.4 65 61.5
Lj4g0026171 Lotus japonicus HOM05D008067 ORTHO05D010226 5.5e-08 60.8 54 61.1
Lj2g0025160 Lotus japonicus HOM05D008067 ORTHO05D010226 7.1e-08 60.5 79 49.4
CsaV3_1G030530 Cucumis sativus L. HOM05D008067 ORTHO05D010226 1.6e-07 59.3 50 58.0
Glyma.08G039000 Glycine max HOM05D008067 ORTHO05D010226 4.6e-07 57.8 68 55.9
Lj2g0022306 Lotus japonicus HOM05D008067 ORTHO05D010226 6.1e-07 57.4 79 49.4
Glyma.05G231500 Glycine max HOM05D008067 ORTHO05D010226 1.0e-06 56.6 59 55.9
Lj2g0013738 Lotus japonicus HOM05D008067 ORTHO05D010226 1.0e-06 56.6 65 50.8
Sed0018150 Sechium edule HOM05D008067 ORTHO05D010226 1.3e-06 56.2 74 47.3
TAR636G2707 Trochodendron aralioides HOM05D003111 ORTHO05D003502 1.3e-06 56.2 70 51.4
PGR083G0815 Punica granatum HOM05D006736 ORTHO05D008459 2.3e-06 55.5 62 45.2
Phvul.002G313700 Phaseolus vulgaris HOM05D008067 ORTHO05D010226 5.1e-06 54.3 36 69.4
SEGI_20043 Sequoiadendron giganteum HOM05D008067 ORTHO05D010226 8.7e-06 53.5 50 54.0


User provided reference genes

Program Settings