Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 6.5e-105 384.0 189 100.0
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 4.0e-30 135.6 186 43.0
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.8e-28 129.0 161 43.5
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 3.8e-28 129.0 160 43.1
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 8.4e-28 127.9 190 43.2
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 1.4e-27 127.1 146 45.9
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.4e-27 127.1 146 45.9
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.9e-27 126.7 190 43.2
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.2e-27 125.6 190 42.6
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 2.1e-26 123.2 141 46.1
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 2.1e-26 123.2 164 43.9
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 2.1e-26 123.2 157 46.5
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 2.3e-25 119.8 142 46.5
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 8.7e-25 117.9 146 45.9
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 1.1e-24 117.5 184 40.8
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 4.3e-24 115.5 139 42.4
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 5.6e-24 115.2 139 42.4
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 2.1e-23 113.2 181 35.9
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 2.8e-23 112.8 145 41.4
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 4.8e-23 112.1 134 44.0
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 6.2e-23 111.7 163 39.3
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 6.2e-23 111.7 136 39.7
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.8e-22 110.2 136 43.4
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 1.8e-22 110.2 136 43.4
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 3.1e-22 109.4 134 42.5
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 4.0e-22 109.0 128 43.0
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 4.0e-22 109.0 157 40.1
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 4.0e-22 109.0 128 43.0
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 5.3e-22 108.6 136 42.6
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.0e-21 106.7 157 38.9
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.6e-21 106.3 156 39.7
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.5e-21 105.5 164 37.8
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 5.8e-21 105.1 174 40.2
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 1.3e-20 104.0 129 38.8
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 1.3e-20 104.0 133 40.6
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 1.7e-20 103.6 138 41.3
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 2.2e-20 103.2 127 44.1
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 2.9e-20 102.8 124 41.1
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 4.9e-20 102.1 129 42.6
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 1.9e-19 100.1 127 42.5
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 5.5e-19 98.6 126 38.9
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 7.1e-19 98.2 116 39.7
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 7.1e-19 98.2 168 36.3
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 7.9e-18 94.7 172 33.7
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 7.9e-18 94.7 127 35.4
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 1.0e-17 94.4 128 41.4
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.0e-17 94.4 130 41.5
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 3.0e-17 92.8 171 33.9
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 3.9e-17 92.4 143 37.8
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 1.1e-16 90.9 131 35.9
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 2.5e-16 89.7 134 36.6
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 5.6e-16 88.6 128 37.5
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 9.6e-16 87.8 120 37.5
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 1.3e-15 87.4 129 37.2
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 1.3e-15 87.4 134 36.6
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 2.1e-15 86.7 147 29.3
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 2.8e-15 86.3 128 36.7
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 2.8e-15 86.3 133 34.6
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 3.7e-15 85.9 129 37.2
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 1.1e-14 84.3 129 36.4
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 1.8e-14 83.6 135 40.0
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 1.8e-14 83.6 128 38.3
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 1.8e-14 83.6 128 33.6
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 2.4e-14 83.2 135 40.0
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 4.0e-14 82.4 129 35.7
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 9.0e-14 81.3 129 35.7
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 1.2e-13 80.9 123 35.0
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 1.2e-13 80.9 128 32.8
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 1.5e-13 80.5 133 36.1
PGSC0003DMG400000371 Solanum tuberosum HOM05D002733 ORTHO05D003856 1.5e-13 80.5 129 34.1
QL01p018939 Quercus lobata HOM05D002733 ORTHO05D003856 2.0e-13 80.1 130 38.5
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 2.6e-13 79.7 145 34.5
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 3.4e-13 79.3 133 32.3
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 5.8e-13 78.6 113 32.7
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 7.6e-13 78.2 128 38.3
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 7.6e-13 78.2 128 38.3
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 1.0e-12 77.8 130 33.8
Haze_00185 Corylus avellana HOM05D002733 ORTHO05D003856 1.0e-12 77.8 122 35.2
DCAR_014131 Daucus carota HOM05D002733 ORTHO05D003856 1.3e-12 77.4 128 35.2
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 1.3e-12 77.4 135 35.6
Sed0017653 Sechium edule HOM05D002733 ORTHO05D003856 1.3e-12 77.4 122 36.1
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 1.3e-12 77.4 128 31.2
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 1.7e-12 77.0 132 35.6
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 2.2e-12 76.6 128 33.6
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 2.2e-12 76.6 122 36.1
Peaxi162Scf00665g00148 Petunia axillaris HOM05D002733 ORTHO05D003856 3.8e-12 75.9 160 32.5
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 3.8e-12 75.9 132 34.1
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 4.9e-12 75.5 123 33.3
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 6.5e-12 75.1 156 32.1
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 6.5e-12 75.1 111 31.5
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.1e-11 74.3 127 37.8
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 1.1e-11 74.3 161 35.4
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 1.9e-11 73.6 132 33.3
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 1.9e-11 73.6 173 32.4
Dinv41650 Davidia involucrata HOM05D002733 ORTHO05D003856 2.5e-11 73.2 88 46.6
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 2.5e-11 73.2 116 34.5
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 3.2e-11 72.8 142 31.7
Prupe.7G162100 Prunus persica HOM05D002733 ORTHO05D003856 3.2e-11 72.8 194 33.5
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 4.2e-11 72.4 155 31.6
Peaxi162Scf00665g00139 Petunia axillaris HOM05D002733 ORTHO05D003856 4.2e-11 72.4 127 38.6
Sabra08G0161200 Salix brachista HOM05D002733 ORTHO05D003856 5.5e-11 72.0 104 41.3
MD02G1060300 Malus domestica HOM05D002733 ORTHO05D003856 9.3e-11 71.2 108 39.8
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 1.6e-10 70.5 122 33.6
FAN19G0693 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.7e-10 69.7 61 54.1
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 3.5e-10 69.3 123 33.3
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 7.9e-10 68.2 111 35.1
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 7.9e-10 68.2 111 35.1
CiPaw.03G015100 Carya illinoinensis HOM05D002733 ORTHO05D003856 7.9e-10 68.2 91 40.7
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 7.9e-10 68.2 113 38.1
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 1.3e-09 67.4 117 33.3
Dinv26718 Davidia involucrata HOM05D002733 ORTHO05D003856 1.8e-09 67.0 94 42.6
FAN28G2808 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.8e-09 67.0 105 40.0
TPR.G22027 Trifolium pratense HOM05D002733 ORTHO05D003856 1.8e-09 67.0 76 44.7
THA.LOC104810048 Tarenaya hassleriana HOM05D002733 ORTHO05D003856 2.3e-09 66.6 127 29.9
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 3.0e-09 66.2 110 34.5
Phvul.005G028900 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 3.0e-09 66.2 130 25.4
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 3.9e-09 65.9 110 34.5
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 5.1e-09 65.5 110 33.6
Aqoxy2G03580 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 6.7e-09 65.1 133 33.1
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 6.7e-09 65.1 132 30.3
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 1.5e-08 63.9 117 30.8
Dinv07992 Davidia involucrata HOM05D002733 ORTHO05D003856 2.5e-08 63.2 127 34.6
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 4.3e-08 62.4 132 30.3
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 4.3e-08 62.4 128 30.5
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 4.3e-08 62.4 128 29.7
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 1.3e-07 60.8 132 28.8
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 2.8e-07 59.7 132 28.8
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 3.7e-07 59.3 122 30.3
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 8.2e-07 58.2 122 30.3
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 8.2e-07 58.2 122 30.3
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 8.2e-07 58.2 122 30.3
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.4e-06 57.4 104 31.7
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 6.9e-06 55.1 122 30.3


User provided reference genes

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