Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G223300 Prunus persica HOM05D005310 ORTHO05D006920 4.6e-97 357.8 174 100.0
Prupe.4G066900 Prunus persica HOM05D005310 ORTHO05D006920 7.9e-81 303.9 193 80.8
MD00G1009300 Malus domestica HOM05D005310 ORTHO05D006920 1.4e-77 293.1 193 76.7
MD05G1295400 Malus domestica HOM05D005310 ORTHO05D006920 1.4e-77 293.1 193 76.7
RcHm_v2.0_Chr5g0011641 Rosa chinensis HOM05D005310 ORTHO05D006920 2.4e-77 292.4 193 76.2
FAN21G2773 Fragaria x ananassa HOM05D005310 ORTHO05D006920 1.2e-76 290.0 193 75.1
FAN16G3592 Fragaria x ananassa HOM05D005310 ORTHO05D006920 2.0e-76 289.3 193 74.6
FAN25G3188 Fragaria x ananassa HOM05D005310 ORTHO05D006920 3.4e-76 288.5 193 74.6
FvH4_3g07310 Fragaria vesca HOM05D005310 ORTHO05D006920 4.5e-76 288.1 193 74.6
FAN11G0629 Fragaria x ananassa HOM05D005310 ORTHO05D006920 1.0e-75 287.0 193 74.1
MELO3C002677.2 Cucumis melo HOM05D005310 ORTHO05D006920 2.2e-75 285.8 193 74.1
RcHm_v2.0_Chr5g0061601 Rosa chinensis HOM05D005310 ORTHO05D006920 2.2e-75 285.8 193 75.1
Sed0028201 Sechium edule HOM05D005310 ORTHO05D006920 3.8e-75 285.0 193 74.1
TWI53G0456 Tripterygium wilfordii HOM05D005310 ORTHO05D006920 4.9e-75 284.6 193 73.6
Dinv32339 Davidia involucrata HOM05D005310 ORTHO05D006920 8.4e-75 283.9 191 74.3
CsaV3_1G033090 Cucumis sativus L. HOM05D005310 ORTHO05D006920 3.2e-74 282.0 193 72.5
QL05p049965 Quercus lobata HOM05D005310 ORTHO05D006920 3.2e-74 282.0 192 72.9
CiPaw.09G137200 Carya illinoinensis HOM05D005310 ORTHO05D006920 4.2e-74 281.6 193 72.5
GSVIVG01021256001 Vitis vinifera HOM05D005310 ORTHO05D006920 4.2e-74 281.6 193 72.5
Hma1.2p1_2416F.1_g321740 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 9.3e-74 280.4 193 72.5
CSS0016268 Camellia sinensis var. sinensis HOM05D005310 ORTHO05D006920 1.6e-73 279.6 190 73.2
Atru.chr10.1571 Acer truncatum HOM05D005310 ORTHO05D006920 2.7e-73 278.9 193 72.0
Manes.16G042900 Manihot esculenta HOM05D005310 ORTHO05D006920 2.7e-73 278.9 193 73.1
vmacro16023 Vaccinium macrocarpon HOM05D005310 ORTHO05D006920 2.7e-73 278.9 193 72.0
COL.COLO4_31237 Corchorus olitorius HOM05D005310 ORTHO05D006920 3.5e-73 278.5 193 72.5
EL10Ac8g20559 Beta vulgaris HOM05D005310 ORTHO05D006920 4.6e-73 278.1 191 71.2
Gohir.A06G133700 Gossypium hirsutum HOM05D005310 ORTHO05D006920 4.6e-73 278.1 193 71.5
Ah.14g086990 Amaranthus hybridus HOM05D005310 ORTHO05D006920 1.0e-72 276.9 191 71.7
Migut.M01009 Erythranthe guttata HOM05D005310 ORTHO05D006920 1.0e-72 276.9 195 71.8
Aqoxy1G01994 Aquilegia oxysepala HOM05D005310 ORTHO05D006920 1.3e-72 276.6 193 72.5
Gohir.D06G138800 Gossypium hirsutum HOM05D005310 ORTHO05D006920 1.3e-72 276.6 193 71.0
Lj1A1175T55 Lonicera japonica HOM05D005310 ORTHO05D006920 1.8e-72 276.2 193 72.5
Cpa.g.sc7.109 Carica papaya HOM05D005310 ORTHO05D006920 2.3e-72 275.8 194 71.1
TPR.G6733 Trifolium pratense HOM05D005310 ORTHO05D006920 2.3e-72 275.8 193 71.0
Gorai.010G161400 Gossypium raimondii HOM05D005310 ORTHO05D006920 3.0e-72 275.4 193 71.0
PGR042G1369 Punica granatum HOM05D005310 ORTHO05D006920 5.1e-72 274.6 193 71.5
Ca_17897_v3 Cicer arietinum L. HOM05D005310 ORTHO05D006920 6.7e-72 274.2 193 71.0
Oeu040921.3 Olea europaea HOM05D005310 ORTHO05D006920 6.7e-72 274.2 193 71.0
PSO210G5690 Papaver somniferum HOM05D005310 ORTHO05D006920 6.7e-72 274.2 193 71.5
SalBow8G4237 Salvia bowleyana HOM05D005310 ORTHO05D006920 8.7e-72 273.9 193 71.0
Thecc.06G165700 Theobroma cacao HOM05D005310 ORTHO05D006920 1.1e-71 273.5 193 71.0
Duzib192G0594 Durio zibethinus HOM05D005310 ORTHO05D006920 1.5e-71 273.1 193 70.5
Ciclev10018335m.g Citrus clementina HOM05D005310 ORTHO05D006920 1.9e-71 272.7 193 71.0
Phvul.002G241100 Phaseolus vulgaris HOM05D005310 ORTHO05D006920 1.9e-71 272.7 193 71.0
Sc05g0006870 Simmondsia chinensis HOM05D005310 ORTHO05D006920 1.9e-71 272.7 193 68.4
Haze_05356 Corylus avellana HOM05D005310 ORTHO05D006920 2.5e-71 272.3 191 71.2
Psat7g068720 Pisum sativum HOM05D005310 ORTHO05D006920 2.5e-71 272.3 193 69.4
Sp7g17520 Schrenkiella parvula HOM05D005310 ORTHO05D006920 4.3e-71 271.6 193 71.5
Nn3g21104 Nelumbo nucifera HOM05D005310 ORTHO05D006920 5.7e-71 271.2 193 71.5
ClCG03G007450 Citrullus lanatus HOM05D005310 ORTHO05D006920 7.4e-71 270.8 226 62.4
Lj4g0024191 Lotus japonicus HOM05D005310 ORTHO05D006920 7.4e-71 270.8 193 71.5
Nitab4.5_0005937g0010 Nicotiana tabacum HOM05D005310 ORTHO05D006920 7.4e-71 270.8 194 70.1
AL7G35440 Arabidopsis lyrata HOM05D005310 ORTHO05D006920 9.7e-71 270.4 193 71.0
Potri.004G061200 Populus trichocarpa HOM05D005310 ORTHO05D006920 9.7e-71 270.4 193 70.5
AT4G18810 Arabidopsis thaliana HOM05D005310 ORTHO05D006920 1.3e-70 270.0 193 70.5
A01p10840 Brassica napus HOM05D005310 ORTHO05D006920 1.3e-70 270.0 193 70.5
C01p12850 Brassica napus HOM05D005310 ORTHO05D006920 1.3e-70 270.0 193 70.5
BraA01t01031Z Brassica rapa HOM05D005310 ORTHO05D006920 1.3e-70 270.0 193 70.5
Eucgr.E02785 Eucalyptus grandis HOM05D005310 ORTHO05D006920 1.3e-70 270.0 193 69.9
VMungo0251G0247 Vigna mungo HOM05D005310 ORTHO05D006920 1.3e-70 270.0 193 70.5
Glyma.08G118400 Glycine max HOM05D005310 ORTHO05D006920 1.6e-70 269.6 193 70.5
DCAR_027984 Daucus carota HOM05D005310 ORTHO05D006920 2.8e-70 268.9 193 71.0
Thhalv10024714m.g Eutrema salsugineum HOM05D005310 ORTHO05D006920 3.7e-70 268.5 193 70.5
Lsat_1_v5_gn_1_110100 Lactuca sativa HOM05D005310 ORTHO05D006920 3.7e-70 268.5 193 71.0
BolC1t01261H Brassica oleracea HOM05D005310 ORTHO05D006920 4.8e-70 268.1 190 70.5
Carub.0007s2242 Capsella rubella HOM05D005310 ORTHO05D006920 6.3e-70 267.7 193 69.9
AUR62041821 Chenopodium quinoa HOM05D005310 ORTHO05D006920 6.3e-70 267.7 203 67.5
ECA248G0338 Erigeron canadensis HOM05D005310 ORTHO05D006920 6.3e-70 267.7 193 71.0
CARHR225670 Cardamine hirsuta HOM05D005310 ORTHO05D006920 8.2e-70 267.3 193 69.9
Nitab4.5_0000437g0070 Nicotiana tabacum HOM05D005310 ORTHO05D006920 8.2e-70 267.3 194 69.1
Hund04397 Selenicereus undatus HOM05D005310 ORTHO05D006920 1.1e-69 266.9 190 70.5
THA.LOC104806167 Tarenaya hassleriana HOM05D005310 ORTHO05D006920 1.1e-69 266.9 193 69.9
CAN.G411.52 Capsicum annuum HOM05D005310 ORTHO05D006920 1.8e-69 266.2 193 68.9
Medtr8g087310 Medicago truncatula HOM05D005310 ORTHO05D006920 2.4e-69 265.8 193 68.4
Solyc02g072160.4 Solanum lycopersicum HOM05D005310 ORTHO05D006920 2.4e-69 265.8 193 69.4
PGSC0003DMG400028420 Solanum tuberosum HOM05D005310 ORTHO05D006920 2.4e-69 265.8 193 69.4
Aa31LG6G1520 Aethionema arabicum HOM05D005310 ORTHO05D006920 3.1e-69 265.4 190 70.0
Glyma.05G161000 Glycine max HOM05D005310 ORTHO05D006920 9.0e-69 263.8 194 69.6
Peaxi162Scf00202g01112 Petunia axillaris HOM05D005310 ORTHO05D006920 9.0e-69 263.8 192 67.2
Sopen02g021140 Solanum pennellii HOM05D005310 ORTHO05D006920 9.0e-69 263.8 193 68.9
SGA_v2.0_scaffold16G07714 Striga asiatica HOM05D005310 ORTHO05D006920 9.0e-69 263.8 193 71.5
TAR627G0081 Trochodendron aralioides HOM05D005310 ORTHO05D006920 1.2e-68 263.5 186 72.6
unitig_0.g743 Utricularia gibba HOM05D005310 ORTHO05D006920 1.2e-68 263.5 193 67.9
Cc02_g15580 Coffea canephora HOM05D005310 ORTHO05D006920 2.0e-68 262.7 193 68.4
ATR0012G016 Amborella trichopoda HOM05D005310 ORTHO05D006920 3.4e-68 261.9 193 68.4
HPP92_004025 Vanilla planifolia HOM05D005310 ORTHO05D006920 7.6e-68 260.8 193 69.4
arahy.Tifrunner.gnm1.ann1.NMJG4G Arachis hypogaea HOM05D005310 ORTHO05D006920 1.0e-67 260.4 194 69.6
Os02g0234500 Oryza sativa ssp. japonica HOM05D005310 ORTHO05D006920 2.2e-67 259.2 193 68.9
AUR62039478 Chenopodium quinoa HOM05D005310 ORTHO05D006920 8.5e-67 257.3 207 64.3
SEGI_40960 Sequoiadendron giganteum HOM05D005310 ORTHO05D006920 1.9e-66 256.1 190 67.9
HPP92_004012 Vanilla planifolia HOM05D005310 ORTHO05D006920 5.5e-66 254.6 193 68.4
HanXRQChr11g0343901 Helianthus annuus HOM05D005310 ORTHO05D006920 9.3e-66 253.8 187 68.4
Lalb_Chr12g0204951 Lupinus albus HOM05D005310 ORTHO05D006920 3.6e-65 251.9 223 60.1
Mapoly0037s0097 Marchantia polymorpha HOM05D005310 ORTHO05D006920 5.7e-63 244.6 194 63.4
Pp3c26_9450 Physcomitrium patens HOM05D005310 ORTHO05D006920 6.3e-62 241.1 193 63.2
Sabra04G0040500 Salix brachista HOM05D005310 ORTHO05D006920 5.3e-61 238.0 277 49.1
SMO119G0157 Selaginella moellendorffii HOM05D005310 ORTHO05D006920 5.0e-59 231.5 191 62.3
CDE04G2110 Ceratophyllum demersum HOM05D005310 ORTHO05D006920 1.1e-58 230.3 178 68.0
AagrBONN_evm.TU.Sc2ySwM_362.2005 Anthoceros agrestis HOM05D005310 ORTHO05D006920 7.2e-58 227.6 168 67.9
Dinv12753 Davidia involucrata HOM05D005310 ORTHO05D006920 4.1e-53 211.8 118 88.1
Actinidia07651 Actinidia chinensis HOM05D005310 ORTHO05D006920 3.4e-52 208.8 181 61.9
Actinidia02744 Actinidia chinensis HOM05D005310 ORTHO05D006920 6.7e-48 194.5 156 67.9
CBR_g48496 Chara braunii HOM05D005310 ORTHO05D006920 2.7e-41 172.6 182 50.5
Haze_05354 Corylus avellana HOM05D005310 ORTHO05D006920 1.3e-35 153.7 133 63.2
Cre05.g244800 Chlamydomonas reinhardtii HOM05D005310 ORTHO05D006920 1.9e-34 149.8 185 44.3
Prupe.6G055000 Prunus persica HOM05D005310 ORTHO05D006920 2.5e-34 149.4 78 93.6
Prupe.3G259500 Prunus persica HOM05D005310 ORTHO05D006920 7.2e-34 147.9 78 92.3
RcHm_v2.0_Chr2g0109871 Rosa chinensis HOM05D005310 ORTHO05D006920 7.2e-34 147.9 85 88.2
BcaC09g51481 Brassica carinata HOM05D005310 ORTHO05D006920 1.0e-32 144.1 113 66.4
Hma1.2p1_2416F.1_g321730 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 6.8e-32 141.4 80 83.8
Zm00001eb204900 Zea mays HOM05D005310 ORTHO05D006920 4.4e-31 138.7 115 61.7
Haze_05378 Corylus avellana HOM05D005310 ORTHO05D006920 6.8e-24 114.8 78 74.4
Prupe.8G174100 Prunus persica HOM05D005310 ORTHO05D006920 4.9e-22 108.6 107 56.1
PRCOL_00002435 Prasinoderma coloniale HOM05D005310 ORTHO05D006920 8.3e-22 107.8 187 40.1
Hund23016 Selenicereus undatus HOM05D005310 ORTHO05D006920 7.0e-21 104.8 120 51.7
Rhsim02G0147000 Rhododendron simsii HOM05D005310 ORTHO05D006920 1.4e-13 80.5 97 50.5
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 5.4e-13 78.6 55 70.9
Hund23039 Selenicereus undatus HOM05D005310 ORTHO05D006920 9.2e-13 77.8 70 60.0
Haze_05358 Corylus avellana HOM05D005310 ORTHO05D006920 5.6e-10 68.6 38 78.9
TPR.G7458 Trifolium pratense HOM05D005310 ORTHO05D006920 2.8e-09 66.2 36 83.3
CBR_g23069 Chara braunii HOM05D005310 ORTHO05D006920 8.9e-08 61.2 105 42.9


User provided reference genes

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