Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G221300 Prunus persica HOM05D022870 ORTHO05D000091 2.6e-165 585.5 331 100.0
MD02G1064400 Malus domestica HOM05D002350 ORTHO05D000091 2.4e-22 110.5 224 42.0
MD15G1195200 Malus domestica HOM05D022870 ORTHO05D025498 2.3e-20 104.0 215 37.7
Prupe.7G221200 Prunus persica HOM05D002350 ORTHO05D000091 1.8e-17 94.4 59 83.1
MD02G1064700 Malus domestica HOM05D022870 ORTHO05D025498 2.4e-17 94.0 219 38.8
ClCG03G016200 Citrullus lanatus HOM05D002350 ORTHO05D000091 1.3e-10 71.6 83 43.4
MD15G1195400 Malus domestica HOM05D002350 ORTHO05D000091 1.3e-10 71.6 82 41.5
QL02p042039 Quercus lobata HOM05D002350 ORTHO05D000091 4.8e-10 69.7 132 38.6
CSS0048603 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 6.2e-10 69.3 112 38.4
Sopen12g003370 Solanum pennellii HOM05D002350 ORTHO05D000091 1.1e-09 68.6 147 32.0
CiPaw.03G226000 Carya illinoinensis HOM05D002350 ORTHO05D000091 2.4e-09 67.4 139 33.8
DCAR_010692 Daucus carota HOM05D002350 ORTHO05D000091 2.4e-09 67.4 92 40.2
DCAR_010693 Daucus carota HOM05D002350 ORTHO05D000091 2.4e-09 67.4 92 40.2
arahy.Tifrunner.gnm1.ann1.9LQV7C Arachis hypogaea HOM05D002350 ORTHO05D000091 5.3e-09 66.2 102 35.3
EL10Ac8g18396 Beta vulgaris HOM05D002350 ORTHO05D000091 9.0e-09 65.5 81 37.0
Atru.chr7.1447 Acer truncatum HOM05D002350 ORTHO05D000091 1.2e-08 65.1 109 34.9
arahy.Tifrunner.gnm1.ann1.SM79W1 Arachis hypogaea HOM05D002350 ORTHO05D000091 1.5e-08 64.7 117 35.0
FAN23G2545 Fragaria x ananassa HOM05D002350 ORTHO05D000091 2.0e-08 64.3 73 46.6
FAN26G1444 Fragaria x ananassa HOM05D002350 ORTHO05D000091 2.0e-08 64.3 142 33.1
FAN26G3334 Fragaria x ananassa HOM05D002350 ORTHO05D000091 2.6e-08 63.9 142 33.1
Nitab4.5_0000566g0160 Nicotiana tabacum HOM05D002350 ORTHO05D000091 2.6e-08 63.9 64 48.4
Peaxi162Scf00824g00114 Petunia axillaris HOM05D002350 ORTHO05D000091 3.4e-08 63.5 87 40.2
arahy.Tifrunner.gnm1.ann1.2RFB5Y Arachis hypogaea HOM05D002350 ORTHO05D000091 4.5e-08 63.2 97 36.1
arahy.Tifrunner.gnm1.ann1.7X0VYH Arachis hypogaea HOM05D002350 ORTHO05D000091 4.5e-08 63.2 97 36.1
MELO3C015406.2 Cucumis melo HOM05D002350 ORTHO05D000091 5.8e-08 62.8 106 40.6
FvH4_1g05980 Fragaria vesca HOM05D002350 ORTHO05D000091 5.8e-08 62.8 73 46.6
Lj2g0003052 Lotus japonicus HOM05D002350 ORTHO05D000091 5.8e-08 62.8 65 44.6
VMungo0464G0493 Vigna mungo HOM05D002350 ORTHO05D000091 5.8e-08 62.8 84 41.7
Hma1.2p1_0571F.1_g180860 Hydrangea macrophylla HOM05D002350 ORTHO05D000091 7.6e-08 62.4 65 41.5
Sc08g0007930 Simmondsia chinensis HOM05D002350 ORTHO05D000091 7.6e-08 62.4 62 48.4
Nitab4.5_0001354g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 9.9e-08 62.0 126 31.0
PGSC0003DMG402000361 Solanum tuberosum HOM05D002350 ORTHO05D000091 9.9e-08 62.0 151 31.8
Haze_25813 Corylus avellana HOM05D002350 ORTHO05D000091 1.7e-07 61.2 73 45.2
PGR102G2642 Punica granatum HOM05D002350 ORTHO05D000091 1.7e-07 61.2 92 38.0
Hund28809 Selenicereus undatus HOM05D002350 ORTHO05D000091 1.7e-07 61.2 64 40.6
Hund28811 Selenicereus undatus HOM05D002350 ORTHO05D000091 1.7e-07 61.2 64 40.6
Phvul.004G176400 Phaseolus vulgaris HOM05D002350 ORTHO05D000091 2.2e-07 60.8 66 40.9
Haze_25814 Corylus avellana HOM05D002350 ORTHO05D000091 2.9e-07 60.5 113 38.9
Nitab4.5_0011131g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 2.9e-07 60.5 64 46.9
RcHm_v2.0_Chr5g0014401 Rosa chinensis HOM05D002350 ORTHO05D000091 2.9e-07 60.5 69 44.9
Thecc.09G101800 Theobroma cacao HOM05D002350 ORTHO05D000091 2.9e-07 60.5 98 33.7
arahy.Tifrunner.gnm1.ann1.HAD3B9 Arachis hypogaea HOM05D002350 ORTHO05D000091 3.8e-07 60.1 96 35.4
Cfa003193 Carpinus fangiana HOM05D002350 ORTHO05D000091 4.9e-07 59.7 63 47.6
Actinidia32657 Actinidia chinensis HOM05D002350 ORTHO05D000091 8.4e-07 58.9 65 40.0
Cfa003192 Carpinus fangiana HOM05D002350 ORTHO05D000091 8.4e-07 58.9 124 36.3
FAN19G1217 Fragaria x ananassa HOM05D002350 ORTHO05D000091 8.4e-07 58.9 74 45.9
Rhsim03G0237500 Rhododendron simsii HOM05D002350 ORTHO05D000091 8.4e-07 58.9 62 41.9
Medtr6g088625 Medicago truncatula HOM05D002350 ORTHO05D000091 1.1e-06 58.5 92 32.6
FvH4_1g05990 Fragaria vesca HOM05D002350 ORTHO05D000091 1.4e-06 58.2 63 47.6
FAN19G0855 Fragaria x ananassa HOM05D010172 ORTHO05D025498 1.4e-06 58.2 63 47.6
Nitab4.5_0000165g0040 Nicotiana tabacum HOM05D002350 ORTHO05D000091 1.4e-06 58.2 72 38.9
AUR62010903 Chenopodium quinoa HOM05D002350 ORTHO05D000091 3.2e-06 57.0 72 38.9
GSVIVG01015313001 Vitis vinifera HOM05D002350 ORTHO05D000091 4.2e-06 56.6 68 41.2
Cfa003194 Carpinus fangiana HOM05D002350 ORTHO05D000091 5.4e-06 56.2 93 37.6


User provided reference genes

Program Settings