Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 2.1e-263 911.8 448 100.0
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 5.9e-213 744.2 431 85.2
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 4.0e-193 678.3 437 78.3
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 8.2e-191 670.6 431 78.9
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.1e-190 670.2 431 78.7
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.7e-189 665.6 431 78.7
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 9.4e-187 657.1 431 78.0
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 4.7e-178 628.2 411 78.1
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 4.4e-176 621.7 414 74.9
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 2.2e-175 619.4 428 71.7
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 1.8e-174 616.3 427 72.6
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 5.2e-169 598.2 435 69.0
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 8.9e-169 597.4 428 69.9
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 8.9e-169 597.4 433 67.7
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 7.5e-168 594.3 427 69.1
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 7.5e-168 594.3 436 67.7
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 1.4e-166 590.1 431 69.8
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 4.1e-166 588.6 450 66.2
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 2.7e-165 585.9 427 68.9
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 1.0e-164 583.9 428 69.6
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 6.6e-164 581.3 428 67.8
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 6.6e-164 581.3 426 69.0
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 1.5e-163 580.1 435 66.0
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 2.1e-162 576.2 426 69.2
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 2.3e-161 572.8 431 65.0
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 8.9e-161 570.9 427 65.6
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 5.8e-160 568.2 442 66.7
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 3.7e-159 565.5 434 65.2
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 6.4e-159 564.7 438 66.0
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.4e-158 563.5 428 64.5
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 2.4e-158 562.8 433 65.4
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 1.2e-157 560.5 428 64.7
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 7.8e-157 557.8 433 64.0
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 1.7e-156 556.6 437 64.5
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 8.6e-156 554.3 433 64.9
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 1.5e-155 553.5 410 69.0
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 2.5e-155 552.7 434 64.7
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 3.3e-155 552.4 432 63.9
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 9.5e-155 550.8 430 65.6
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 1.2e-154 550.4 426 64.6
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 5.2e-153 545.0 435 63.2
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 5.2e-153 545.0 402 67.7
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 1.5e-152 543.5 428 64.7
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 4.4e-152 542.0 433 62.6
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 4.4e-152 542.0 435 62.3
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 5.8e-152 541.6 430 64.9
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 7.5e-152 541.2 435 62.8
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 9.9e-152 540.8 435 62.8
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 1.7e-151 540.0 435 62.8
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 3.7e-151 538.9 474 58.2
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 4.9e-151 538.5 435 62.1
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 1.9e-150 536.6 449 61.5
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 1.9e-150 536.6 428 64.3
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 2.4e-150 536.2 423 62.6
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 1.2e-149 533.9 433 62.1
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 4.6e-149 531.9 432 62.5
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 6.0e-149 531.6 406 66.7
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 7.8e-149 531.2 419 64.2
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 5.1e-148 528.5 433 63.3
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 3.3e-147 525.8 426 62.2
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 7.3e-147 524.6 419 63.7
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 4.0e-145 518.8 432 62.0
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 4.0e-145 518.8 431 61.3
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 6.8e-145 518.1 419 63.5
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 5.8e-144 515.0 436 61.7
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 4.9e-143 511.9 443 59.1
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 1.1e-142 510.8 441 58.0
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 1.9e-142 510.0 419 61.8
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 7.3e-139 498.0 425 61.4
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 5.8e-136 488.4 413 61.7
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 7.6e-136 488.0 387 64.3
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 4.9e-135 485.3 377 64.5
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 2.4e-134 483.0 385 65.2
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 5.4e-134 481.9 417 59.5
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 5.4e-134 481.9 381 62.5
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 4.6e-133 478.8 377 64.2
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 6.0e-133 478.4 444 56.1
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 1.0e-132 477.6 382 63.9
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 3.0e-132 476.1 431 57.5
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 7.3e-131 471.5 370 64.1
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 9.6e-131 471.1 321 75.4
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 5.3e-129 465.3 428 57.7
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 2.0e-128 463.4 359 64.9
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 2.6e-128 463.0 440 57.5
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.3e-127 460.7 421 58.0
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 2.9e-127 459.5 439 57.4
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 3.8e-127 459.1 430 56.0
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.1e-126 457.6 430 55.6
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 6.7e-124 448.4 437 57.4
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 5.6e-123 445.3 455 51.4
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.4e-121 440.7 391 58.6
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 4.0e-121 439.1 363 63.1
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 1.1e-118 431.0 431 53.8
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 1.5e-115 420.6 364 59.6
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.5e-112 410.6 289 69.6
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 4.5e-112 409.1 382 56.0
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 6.0e-109 398.7 484 45.7
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 6.9e-105 385.2 464 45.5
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 2.0e-99 367.1 280 63.2
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 1.2e-96 357.8 435 48.0
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.0e-95 354.8 287 63.1
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 2.5e-94 350.1 268 67.5
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 3.2e-94 349.7 283 62.9
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 3.0e-92 343.2 425 48.2
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 5.5e-86 322.4 439 42.8
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 1.1e-73 281.6 425 42.4
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 3.8e-71 273.1 241 59.8
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 6.3e-66 255.8 271 51.7
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 4.0e-52 209.9 162 62.3
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 7.8e-48 195.7 150 62.0
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.2e-45 188.3 136 68.4
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 2.1e-45 187.6 173 56.6
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 2.3e-44 184.1 112 78.6
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 7.3e-38 162.5 472 29.9
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 1.2e-35 155.2 140 60.0
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 2.1e-29 134.4 481 26.6
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 3.8e-26 123.6 320 29.4
Ciclev10010851m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.0e-23 115.5 71 78.9
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 7.1e-17 92.8 50 82.0
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 9.3e-17 92.4 110 47.3
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 3.9e-15 87.0 46 82.6
TPR.G23499 Trifolium pratense HOM05D002451 ORTHO05D007901 1.5e-11 75.1 51 64.7
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 2.6e-11 74.3 36 86.1
COL.COLO4_28348 Corchorus olitorius HOM05D002451 ORTHO05D007901 1.9e-06 58.2 35 74.3


User provided reference genes

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