Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 4.4e-286 987.3 497 100.0
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 2.5e-233 812.0 497 82.9
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 7.2e-212 740.7 503 75.3
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 2.1e-203 712.6 503 72.6
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.5e-196 689.1 488 71.7
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 9.4e-196 687.2 488 71.5
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 2.4e-191 672.5 501 66.5
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 4.0e-186 655.2 501 65.5
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 5.7e-185 651.4 501 66.9
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 2.9e-176 622.5 501 63.9
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 7.3e-172 607.8 504 63.3
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 9.5e-172 607.4 502 62.4
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 8.1e-171 604.4 502 61.8
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 1.8e-170 603.2 505 61.2
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 1.2e-166 590.5 501 61.5
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 6.0e-166 588.2 508 59.8
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 5.6e-164 581.6 505 58.8
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 4.0e-162 575.5 504 60.3
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 2.2e-160 569.7 504 58.5
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 2.9e-160 569.3 506 58.9
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 8.4e-160 567.8 506 58.7
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.4e-159 566.2 415 70.1
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.2e-159 565.8 415 70.6
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 1.0e-157 560.8 514 58.4
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 2.3e-157 559.7 498 59.6
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 3.0e-157 559.3 501 58.3
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 4.3e-156 555.4 509 58.3
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 1.6e-155 553.5 503 59.4
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 2.6e-153 546.2 504 57.3
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.3e-147 527.3 502 55.2
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.3e-147 527.3 502 56.0
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 1.4e-146 523.9 502 54.4
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 5.8e-145 518.5 457 62.8
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 1.6e-142 510.4 504 54.2
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 3.0e-141 506.1 509 54.2
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 5.1e-141 505.4 420 59.8
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 5.1e-141 505.4 507 53.5
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 6.6e-141 505.0 519 53.0
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 1.5e-140 503.8 503 53.7
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 1.9e-140 503.4 428 60.7
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 2.1e-139 500.0 502 53.0
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 2.4e-138 496.5 509 50.9
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 5.8e-137 491.9 499 52.7
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 2.9e-136 489.6 411 61.3
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 7.1e-135 485.0 508 52.2
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 2.1e-134 483.4 508 51.8
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 2.7e-134 483.0 517 49.9
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 3.5e-134 482.6 508 52.0
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 4.6e-134 482.3 505 50.7
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 7.9e-134 481.5 516 51.0
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 1.8e-133 480.3 503 50.1
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 2.3e-133 479.9 508 51.2
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 2.5e-132 476.5 421 58.9
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 1.5e-129 467.2 502 51.0
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 2.6e-129 466.5 510 49.4
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 1.3e-128 464.2 511 50.5
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 1.3e-128 464.2 416 57.2
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 6.5e-128 461.8 506 50.4
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 1.2e-126 457.6 514 49.4
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.2e-126 457.6 314 73.2
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 2.1e-126 456.8 510 49.2
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 6.0e-126 455.3 510 49.0
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 1.3e-125 454.1 510 48.4
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 1.8e-125 453.8 506 47.2
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 8.2e-123 444.9 525 47.4
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 1.4e-119 434.1 450 50.0
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 5.1e-117 425.6 509 48.9
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 2.8e-115 419.9 512 46.3
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 6.3e-115 418.7 412 53.6
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 1.5e-113 414.1 415 53.7
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 2.5e-103 380.2 362 57.7
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 1.5e-100 370.9 423 48.7
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 4.0e-93 346.3 508 41.7
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 1.8e-85 320.9 247 61.9
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 6.1e-78 295.8 552 35.1
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 6.8e-77 292.4 561 36.0
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 3.4e-76 290.0 501 36.5
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 1.3e-72 278.1 501 35.1
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 4.3e-55 219.9 166 69.3
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 2.5e-39 167.5 490 26.7
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 4.9e-35 153.3 116 64.7
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 2.4e-34 151.0 442 28.5
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 7.9e-17 92.8 248 31.5
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 1.8e-16 91.7 503 24.9
SMO302G0010 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 1.6e-06 58.5 120 31.7


User provided reference genes

Program Settings