Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 0.0e+00 1188.7 610 100.0
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.6e-160 570.5 577 59.1
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 3.4e-147 526.2 569 55.2
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.2e-145 519.2 573 55.0
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 7.1e-145 518.5 572 55.1
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.6e-144 515.8 575 54.8
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.1e-141 506.9 574 53.7
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.4e-140 504.2 597 52.3
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.4e-134 481.9 575 52.7
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.1e-118 431.4 596 48.2
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.1e-92 345.1 562 41.5
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 2.0e-91 340.9 626 38.8
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 3.5e-83 313.5 630 37.9
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 9.5e-81 305.4 562 40.0
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.1e-76 292.0 623 36.1
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 5.6e-73 279.6 714 33.3
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.7e-72 276.6 622 35.2
MD02G1078500 Malus domestica HOM05D006771 ORTHO05D008296 8.1e-72 275.8 270 57.4
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 2.0e-70 271.2 621 34.5
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 7.5e-70 269.2 556 35.4
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 7.5e-70 269.2 641 33.7
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 1.7e-69 268.1 595 36.6
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 2.4e-68 264.2 558 36.4
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 6.0e-67 259.6 617 36.0
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 6.0e-67 259.6 583 36.5
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 6.6e-66 256.1 609 36.6
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 7.3e-65 252.7 650 35.4
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 1.1e-63 248.8 426 41.3
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 7.6e-62 242.7 587 34.8
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.9e-60 238.0 627 32.4
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 2.7e-59 234.2 640 32.8
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 4.6e-59 233.4 615 33.7
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 1.0e-58 232.3 604 31.8
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.5e-57 228.4 609 33.3
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 3.3e-57 227.3 646 30.5
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.8e-56 224.2 681 30.0
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 4.7e-56 223.4 295 46.4
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.9e-53 214.2 708 29.5
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 3.8e-53 213.8 615 32.4
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.9e-52 211.5 628 30.1
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.9e-52 211.5 629 32.6
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.6e-51 208.4 612 29.2
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 2.7e-51 207.6 636 31.4
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 3.5e-51 207.2 547 32.5
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 6.0e-51 206.5 655 32.5
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 5.6e-49 199.9 697 28.8
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 7.3e-49 199.5 633 29.7
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 3.1e-47 194.1 607 29.7
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 4.0e-47 193.7 636 30.5
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.6e-46 191.0 424 35.8
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.3e-45 188.7 754 26.4
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 3.8e-45 187.2 584 28.4
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.9e-44 184.9 590 29.3
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.2e-44 184.1 490 31.6
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 5.4e-44 183.3 776 26.5
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.1e-43 181.4 310 41.6
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 6.0e-43 179.9 813 26.3
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 7.9e-43 179.5 293 41.0
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.0e-42 177.6 316 42.4
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 6.6e-42 176.4 311 42.1
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 2.5e-41 174.5 600 29.5
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 5.3e-39 166.8 265 41.1
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 6.9e-39 166.4 788 24.7
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 9.0e-39 166.0 376 34.8
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.6e-38 164.5 214 48.1
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 7.6e-38 162.9 354 37.0
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 2.2e-37 161.4 398 33.4
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 4.9e-37 160.2 355 35.8
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 6.4e-37 159.8 292 39.4
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 1.4e-36 158.7 606 28.4
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 5.5e-36 156.8 624 28.8
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 7.9e-35 152.9 161 50.9
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.8e-34 151.8 535 28.0
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.9e-34 150.6 433 32.8
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 6.7e-34 149.8 521 29.9
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 2.5e-33 147.9 160 52.5
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 4.3e-33 147.1 146 54.1
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.4e-31 142.1 551 27.0
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 1.4e-31 142.1 586 25.9
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 2.4e-31 141.4 624 26.1
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 4.0e-31 140.6 158 51.3
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 6.9e-31 139.8 572 27.6
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.0e-30 138.3 165 48.5
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.0e-29 136.0 134 52.2
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.3e-29 135.6 359 32.9
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.7e-29 135.2 328 35.4
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 8.4e-29 132.9 292 36.0
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 1.4e-28 132.1 282 35.8
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 1.2e-27 129.0 577 25.6
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 3.5e-27 127.5 577 26.9
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.3e-26 125.6 578 26.6
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 8.7e-26 122.9 587 26.6
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 3.3e-25 120.9 589 26.1
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.1e-23 115.9 567 26.5
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 6.9e-23 113.2 282 33.3
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 9.0e-23 112.8 289 32.9
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 2.2e-21 108.2 552 26.1
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 1.0e-18 99.4 126 43.7
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 3.0e-18 97.8 67 73.1
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 6.7e-18 96.7 79 58.2
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 7.4e-17 93.2 138 39.1
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 3.7e-16 90.9 122 40.2
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 1.8e-15 88.6 356 27.8
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.4e-15 88.2 137 37.2
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.4e-15 88.2 137 37.2
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 9.0e-15 86.3 128 38.3
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 3.4e-14 84.3 108 41.7
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 2.2e-13 81.6 123 36.6
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 1.4e-12 79.0 239 28.5
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 5.5e-12 77.0 122 35.2
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.0e-10 72.8 260 30.0
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.4e-10 72.4 119 40.3
Sc18g0002050 Simmondsia chinensis HOM05D006771 ORTHO05D008296 4.4e-09 67.4 105 41.9
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 2.8e-08 64.7 107 37.4
Lalb_Chr08g0232041 Lupinus albus HOM05D006771 ORTHO05D008296 3.4e-06 57.8 230 27.4


User provided reference genes

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