Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G209900 Prunus persica HOM05D007811 ORTHO05D009888 0.0e+00 1459.5 728 100.0
MD02G1079300 Malus domestica HOM05D007811 ORTHO05D009888 4.2e-301 1037.7 692 76.2
RcHm_v2.0_Chr2g0093321 Rosa chinensis HOM05D007811 ORTHO05D009888 4.8e-281 971.1 695 72.5
FAN19G2727 Fragaria x ananassa HOM05D007811 ORTHO05D009888 5.0e-270 934.5 694 69.5
FAN26G0113 Fragaria x ananassa HOM05D007811 ORTHO05D009888 1.9e-269 932.6 694 69.5
FvH4_1g07420 Fragaria vesca HOM05D007811 ORTHO05D009888 2.7e-268 928.7 694 69.2
FAN23G0562 Fragaria x ananassa HOM05D007811 ORTHO05D009888 5.7e-266 921.0 694 68.9
FAN28G1627 Fragaria x ananassa HOM05D007811 ORTHO05D009888 9.7e-258 893.6 688 68.3
FAN26G2623 Fragaria x ananassa HOM05D007811 ORTHO05D009888 8.6e-238 827.4 616 69.3
QL02p062715 Quercus lobata HOM05D007811 ORTHO05D009888 6.2e-220 768.1 706 57.4
Haze_25911 Corylus avellana HOM05D007811 ORTHO05D009888 1.2e-207 727.2 707 56.3
Actinidia39718 Actinidia chinensis HOM05D007811 ORTHO05D009888 2.4e-200 703.0 710 53.5
TWI34G0321 Tripterygium wilfordii HOM05D007811 ORTHO05D009888 5.4e-200 701.8 708 53.7
Cfa003088 Carpinus fangiana HOM05D007811 ORTHO05D009888 9.9e-194 681.0 706 53.5
Ciclev10010815m.g Citrus clementina HOM05D007811 ORTHO05D009888 2.1e-191 673.3 704 53.1
TAR383G0833 Trochodendron aralioides HOM05D007811 ORTHO05D009888 1.9e-189 666.8 716 51.7
Gohir.D07G011150 Gossypium hirsutum HOM05D007811 ORTHO05D009888 2.5e-189 666.4 702 52.1
Gorai.001G011700 Gossypium raimondii HOM05D007811 ORTHO05D009888 1.3e-188 664.1 702 52.0
Potri.006G144600 Populus trichocarpa HOM05D007811 ORTHO05D009888 1.1e-187 661.0 701 52.6
Gohir.A07G011000 Gossypium hirsutum HOM05D007811 ORTHO05D009888 5.3e-187 658.7 704 52.0
Duzib168G1142 Durio zibethinus HOM05D007811 ORTHO05D009888 1.5e-186 657.1 703 51.2
Sabra06G0113100 Salix brachista HOM05D007811 ORTHO05D009888 2.1e-183 646.7 697 51.5
Sabra06G0114400 Salix brachista HOM05D007811 ORTHO05D009888 2.1e-183 646.7 697 51.5
COL.COLO4_18202 Corchorus olitorius HOM05D007811 ORTHO05D009888 6.0e-183 645.2 707 49.9
CANSAT56G0268 Cannabis sativa HOM05D007811 ORTHO05D009888 1.0e-182 644.4 697 51.9
GSVIVG01015202001 Vitis vinifera HOM05D007811 ORTHO05D009888 1.8e-182 643.7 706 50.8
CiPaw.03G216500 Carya illinoinensis HOM05D007811 ORTHO05D009888 8.7e-182 641.3 635 53.4
Manes.03G033600 Manihot esculenta HOM05D007811 ORTHO05D009888 2.1e-175 620.2 695 50.4
Dinv42318 Davidia involucrata HOM05D007811 ORTHO05D009888 4.6e-175 619.0 566 55.3
Atru.chr7.1587 Acer truncatum HOM05D007811 ORTHO05D009888 1.1e-173 614.4 639 52.3
Hma1.2p1_0798F.1_g219820 Hydrangea macrophylla HOM05D007811 ORTHO05D009888 8.2e-172 608.2 698 49.1
Thecc.09G089600 Theobroma cacao HOM05D007811 ORTHO05D009888 1.3e-166 590.9 576 53.1
Hma1.2p1_2664F.1_g326430 Hydrangea macrophylla HOM05D007811 ORTHO05D009888 1.1e-165 587.8 666 49.7
CANSAT56G0922 Cannabis sativa HOM05D007811 ORTHO05D009888 1.3e-164 584.3 697 48.6
PGSC0003DMG400009724 Solanum tuberosum HOM05D007811 ORTHO05D009888 4.4e-157 559.3 694 44.4
DCAR_032238 Daucus carota HOM05D007811 ORTHO05D009888 5.7e-157 558.9 704 45.7
Sopen07g018370 Solanum pennellii HOM05D007811 ORTHO05D009888 7.7e-154 548.5 695 43.9
Solyc07g038100.3 Solanum lycopersicum HOM05D007811 ORTHO05D009888 2.3e-150 537.0 696 43.5
PGR102G3061 Punica granatum HOM05D007811 ORTHO05D009888 2.4e-147 526.9 713 45.3
Nitab4.5_0004978g0030 Nicotiana tabacum HOM05D007811 ORTHO05D009888 4.5e-146 522.7 695 43.3
Nitab4.5_0005634g0040 Nicotiana tabacum HOM05D007811 ORTHO05D009888 9.4e-144 515.0 695 43.0
THA.LOC104817755 Tarenaya hassleriana HOM05D007811 ORTHO05D009888 2.1e-143 513.8 713 44.0
Sc18g0001990 Simmondsia chinensis HOM05D007811 ORTHO05D009888 3.7e-140 503.1 711 43.7
Aqoxy7G04046 Aquilegia oxysepala HOM05D007811 ORTHO05D009888 8.2e-140 501.9 704 43.3
HanXRQChr12g0354871 Helianthus annuus HOM05D007811 ORTHO05D009888 4.7e-135 486.1 700 40.3
SalBow6G0727 Salvia bowleyana HOM05D007811 ORTHO05D009888 1.4e-134 484.6 701 41.8
Thhalv10006501m.g Eutrema salsugineum HOM05D007811 ORTHO05D009888 1.4e-131 474.6 693 41.3
MSTRG.19514 Avicennia marina HOM05D007811 ORTHO05D009888 1.8e-131 474.2 728 40.0
SGA_v2.0_scaffold10G05228 Striga asiatica HOM05D007811 ORTHO05D009888 5.4e-131 472.6 707 38.6
AT3G60310 Arabidopsis thaliana HOM05D007811 ORTHO05D009888 5.9e-130 469.2 692 42.2
Lsat_1_v5_gn_5_142361 Lactuca sativa HOM05D007811 ORTHO05D009888 8.6e-129 465.3 698 40.1
BcaB02g08177 Brassica carinata HOM05D007811 ORTHO05D009888 2.5e-128 463.8 694 40.3
Carub.0005s2705 Capsella rubella HOM05D007811 ORTHO05D009888 9.5e-128 461.8 631 42.9
Peaxi162Scf01121g00111 Petunia axillaris HOM05D007811 ORTHO05D009888 2.1e-127 460.7 694 39.3
AL5G42530 Arabidopsis lyrata HOM05D007811 ORTHO05D009888 8.9e-126 455.3 697 40.6
BcaC02g10146 Brassica carinata HOM05D007811 ORTHO05D009888 3.4e-125 453.4 697 40.6
BolC4t24783H Brassica oleracea HOM05D007811 ORTHO05D009888 3.4e-125 453.4 697 40.9
CARHR170630 Cardamine hirsuta HOM05D007811 ORTHO05D009888 3.7e-124 449.9 709 40.2
C04p32330 Brassica napus HOM05D007811 ORTHO05D009888 1.4e-123 448.0 697 40.5
BraA04t15894Z Brassica rapa HOM05D007811 ORTHO05D009888 7.0e-123 445.7 696 40.9
PSO210G1027 Papaver somniferum HOM05D007811 ORTHO05D009888 2.3e-121 440.7 704 39.5
A04p01700 Brassica napus HOM05D007811 ORTHO05D009888 1.6e-119 434.5 728 38.9
PSO210G6552 Papaver somniferum HOM05D007811 ORTHO05D009888 1.0e-118 431.8 702 39.6
ECA234G0321 Erigeron canadensis HOM05D007811 ORTHO05D009888 1.5e-117 427.9 700 37.7
Nn6g35473 Nelumbo nucifera HOM05D007811 ORTHO05D009888 1.1e-115 421.8 709 38.4
Cpa.g.sc93.35 Carica papaya HOM05D007811 ORTHO05D009888 3.1e-110 403.7 432 47.9
Migut.J00617 Erythranthe guttata HOM05D007811 ORTHO05D009888 7.0e-107 392.5 575 39.5
HPP92_003971 Vanilla planifolia HOM05D007811 ORTHO05D009888 2.6e-101 374.0 666 36.3
Cc00_g27490 Coffea canephora HOM05D007811 ORTHO05D009888 7.6e-93 345.9 389 49.6
Oeu042653.6 Olea europaea HOM05D007811 ORTHO05D009888 2.4e-91 340.9 701 35.0
ATR0749G017 Amborella trichopoda HOM05D007811 ORTHO05D009888 2.3e-89 334.3 766 34.6
Eucgr.C03899 Eucalyptus grandis HOM05D007811 ORTHO05D009888 5.2e-86 323.2 434 41.5
Zm00001eb376990 Zea mays HOM05D007811 ORTHO05D009888 6.6e-81 306.2 719 32.8
MBI01_g21120_MAGBIO Magnolia biondii HOM05D007811 ORTHO05D009888 2.3e-73 281.2 461 39.3
Cpa.g.sc93.36 Carica papaya HOM05D007811 ORTHO05D009888 3.1e-70 270.8 270 56.3
DCAR_028591 Daucus carota HOM05D007811 ORTHO05D009888 5.3e-62 243.4 544 33.1
SEGI_03446 Sequoiadendron giganteum HOM05D007811 ORTHO05D009888 7.7e-53 213.0 485 32.0
Cfa003090 Carpinus fangiana HOM05D007811 ORTHO05D009888 6.1e-42 176.8 153 57.5
CDE04G1243 Ceratophyllum demersum HOM05D000793 ORTHO05D000783 1.4e-35 155.6 405 30.6
CAN.G720.2 Capsicum annuum HOM05D007811 ORTHO05D009888 3.2e-35 154.5 204 36.8
Haze_25909 Corylus avellana HOM05D007811 ORTHO05D009888 1.5e-27 129.0 148 47.3
SEGI_10589 Sequoiadendron giganteum HOM05D007811 ORTHO05D009888 5.7e-24 117.1 239 33.1
Mapoly0096s0065 Marchantia polymorpha HOM05D007811 ORTHO05D009888 1.4e-22 112.5 255 31.0
CAN.G720.1 Capsicum annuum HOM05D007811 ORTHO05D009888 9.1e-22 109.8 119 47.1
AagrBONN_evm.TU.Sc2ySwM_344.5247 Anthoceros agrestis HOM05D007811 ORTHO05D009888 1.3e-12 79.3 252 29.0
TAR626G1045 Trochodendron aralioides HOM05D000238 ORTHO05D011431 3.7e-07 61.2 54 50.0


User provided reference genes

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