Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G209400 Prunus persica HOM05D006545 ORTHO05D007985 6.8e-73 277.3 149 100.0
RcHm_v2.0_Chr2g0093401 Rosa chinensis HOM05D006545 ORTHO05D007985 8.7e-28 127.5 77 90.9
MD02G1079700 Malus domestica HOM05D006545 ORTHO05D007985 3.6e-26 122.1 95 76.8
FvH4_1g07510 Fragaria vesca HOM05D006545 ORTHO05D007985 4.7e-26 121.7 77 85.7
FAN19G0384 Fragaria x ananassa HOM05D006545 ORTHO05D007985 4.7e-26 121.7 77 85.7
FAN23G2021 Fragaria x ananassa HOM05D006545 ORTHO05D007985 4.7e-26 121.7 77 85.7
FAN26G0590 Fragaria x ananassa HOM05D006545 ORTHO05D007985 4.7e-26 121.7 77 85.7
Cfa003081 Carpinus fangiana HOM05D000085 ORTHO05D001460 3.1e-25 119.0 80 80.0
GSVIVG01015199001 Vitis vinifera HOM05D006545 ORTHO05D007985 3.1e-25 119.0 87 78.2
PGR102G1056 Punica granatum HOM05D006545 ORTHO05D007985 5.2e-25 118.2 77 84.4
CANSAT56G1499 Cannabis sativa HOM05D006545 ORTHO05D007985 9.0e-25 117.5 77 83.1
CANSAT56G4473 Cannabis sativa HOM05D006545 ORTHO05D007985 9.0e-25 117.5 77 83.1
QL02p062521 Quercus lobata HOM05D006545 ORTHO05D007985 9.0e-25 117.5 76 82.9
ClCG03G015590 Citrullus lanatus HOM05D006545 ORTHO05D007985 1.2e-24 117.1 85 72.9
CiPaw.04G149100 Carya illinoinensis HOM05D006545 ORTHO05D007985 1.5e-24 116.7 77 83.1
Lsat_1_v5_gn_7_37040 Lactuca sativa HOM05D006545 ORTHO05D007985 1.5e-24 116.7 89 73.0
CsaV3_1G040450 Cucumis sativus L. HOM05D006545 ORTHO05D007985 2.0e-24 116.3 77 79.2
Manes.16G101800 Manihot esculenta HOM05D006545 ORTHO05D007985 2.6e-24 115.9 77 81.8
CiPaw.03G215100 Carya illinoinensis HOM05D006545 ORTHO05D007985 3.4e-24 115.5 77 83.1
Ciclev10010087m.g Citrus clementina HOM05D006545 ORTHO05D007985 4.4e-24 115.2 77 83.1
Sopen12g003790 Solanum pennellii HOM05D006545 ORTHO05D007985 4.4e-24 115.2 78 82.1
DCAR_028856 Daucus carota HOM05D006545 ORTHO05D007985 5.8e-24 114.8 77 83.1
DCAR_032235 Daucus carota HOM05D006545 ORTHO05D007985 5.8e-24 114.8 77 83.1
MELO3C015473.2 Cucumis melo HOM05D006545 ORTHO05D007985 7.6e-24 114.4 76 78.9
TAR383G1000 Trochodendron aralioides HOM05D006545 ORTHO05D007985 7.6e-24 114.4 78 80.8
Eucgr.C00895 Eucalyptus grandis HOM05D006545 ORTHO05D007985 9.9e-24 114.0 79 75.9
Glyma.13G104200 Glycine max HOM05D006545 ORTHO05D007985 9.9e-24 114.0 77 81.8
Glyma.17G054900 Glycine max HOM05D006545 ORTHO05D007985 9.9e-24 114.0 77 81.8
Lj4g0002489 Lotus japonicus HOM05D006545 ORTHO05D007985 9.9e-24 114.0 77 81.8
Solyc12g008860.3 Solanum lycopersicum HOM05D006545 ORTHO05D007985 9.9e-24 114.0 88 76.1
PGSC0003DMG400000279 Solanum tuberosum HOM05D006545 ORTHO05D007985 9.9e-24 114.0 78 82.1
ECA240G1755 Erigeron canadensis HOM05D006545 ORTHO05D007985 1.3e-23 113.6 76 78.9
Os06g0567000 Oryza sativa ssp. japonica HOM05D006545 ORTHO05D007985 1.3e-23 113.6 77 79.2
vmacro06292 Vaccinium macrocarpon HOM05D006545 ORTHO05D007985 1.3e-23 113.6 74 85.1
Atru.chr7.1592 Acer truncatum HOM05D006545 ORTHO05D007985 2.2e-23 112.8 77 81.8
Migut.L01494 Erythranthe guttata HOM05D006545 ORTHO05D007985 2.9e-23 112.5 78 78.2
MD15G1207400 Malus domestica HOM05D006545 ORTHO05D007985 2.9e-23 112.5 77 75.3
Nitab4.5_0000540g0270 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.9e-23 112.5 74 83.8
HanXRQChr12g0363181 Helianthus annuus HOM05D006545 ORTHO05D007985 3.8e-23 112.1 78 78.2
Dinv42321 Davidia involucrata HOM05D006545 ORTHO05D007985 4.9e-23 111.7 79 81.0
Nitab4.5_0008523g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 4.9e-23 111.7 74 85.1
MSTRG.10562 Avicennia marina HOM05D006545 ORTHO05D007985 6.4e-23 111.3 95 71.6
Phvul.003G136800 Phaseolus vulgaris HOM05D006545 ORTHO05D007985 6.4e-23 111.3 77 77.9
TWI34G0024 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 6.4e-23 111.3 77 80.5
Zm00001eb383910 Zea mays HOM05D006545 ORTHO05D007985 8.4e-23 110.9 77 77.9
CDE06G0764 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 1.1e-22 110.5 78 78.2
CDE07G1614 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 1.1e-22 110.5 78 78.2
THA.LOC104820022 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 1.1e-22 110.5 77 81.8
TWI63G0169 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 1.1e-22 110.5 77 80.5
Actinidia29903 Actinidia chinensis HOM05D000085 ORTHO05D001460 1.4e-22 110.2 96 70.8
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 1.9e-22 109.8 82 76.8
Gohir.A13G193400 Gossypium hirsutum HOM05D006545 ORTHO05D007985 2.4e-22 109.4 79 77.2
Potri.004G215200 Populus trichocarpa HOM05D006545 ORTHO05D007985 2.4e-22 109.4 72 83.3
THA.LOC104814622 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 2.4e-22 109.4 77 79.2
Aqoxy7G01208 Aquilegia oxysepala HOM05D006545 ORTHO05D007985 3.2e-22 109.0 74 79.7
Dinv36770 Davidia involucrata HOM05D006545 ORTHO05D007985 3.2e-22 109.0 79 79.7
Duzib150G0099 Durio zibethinus HOM05D006545 ORTHO05D007985 3.2e-22 109.0 79 79.7
PSO210G2413 Papaver somniferum HOM05D006545 ORTHO05D007985 4.2e-22 108.6 74 82.4
unitig_85.g27258 Utricularia gibba HOM05D006545 ORTHO05D007985 4.2e-22 108.6 78 76.9
Nn8g38862 Nelumbo nucifera HOM05D006545 ORTHO05D007985 5.4e-22 108.2 84 75.0
Zm00001eb277360 Zea mays HOM05D006545 ORTHO05D007985 5.4e-22 108.2 76 76.3
PSO210G4511 Papaver somniferum HOM05D006545 ORTHO05D007985 7.1e-22 107.8 74 81.1
Sed0026852 Sechium edule HOM05D006545 ORTHO05D007985 7.1e-22 107.8 77 72.7
Cc06_g11430 Coffea canephora HOM05D006545 ORTHO05D007985 9.3e-22 107.5 98 65.3
Duzib168G1224 Durio zibethinus HOM05D006545 ORTHO05D007985 9.3e-22 107.5 79 78.5
Gohir.D13G199200 Gossypium hirsutum HOM05D006545 ORTHO05D007985 9.3e-22 107.5 79 75.9
Thhalv10026717m.g Eutrema salsugineum HOM05D006545 ORTHO05D007985 1.2e-21 107.1 77 77.9
Manes.03G034000 Manihot esculenta HOM05D006545 ORTHO05D007985 1.2e-21 107.1 77 77.9
Psat4g015120 Pisum sativum HOM05D006545 ORTHO05D007985 1.6e-21 106.7 77 80.5
Potri.006G146800 Populus trichocarpa HOM05D006545 ORTHO05D007985 1.6e-21 106.7 72 80.6
Sabra06G0115900 Salix brachista HOM05D006545 ORTHO05D007985 2.7e-21 105.9 72 80.6
Sc18g0002090 Simmondsia chinensis HOM05D000085 ORTHO05D001460 2.7e-21 105.9 113 59.3
Aa31LG2G20830 Aethionema arabicum HOM05D006545 ORTHO05D007985 3.5e-21 105.5 77 76.6
Gohir.A05G030100 Gossypium hirsutum HOM05D006545 ORTHO05D007985 3.5e-21 105.5 79 77.2
Gohir.D05G031500 Gossypium hirsutum HOM05D006545 ORTHO05D007985 3.5e-21 105.5 79 77.2
Gorai.009G031700 Gossypium raimondii HOM05D006545 ORTHO05D007985 3.5e-21 105.5 79 77.2
Sp7g27510 Schrenkiella parvula HOM05D006545 ORTHO05D007985 3.5e-21 105.5 77 77.9
Thecc.09G088900 Theobroma cacao HOM05D006545 ORTHO05D007985 3.5e-21 105.5 79 77.2
Actinidia19138 Actinidia chinensis HOM05D006545 ORTHO05D007985 4.6e-21 105.1 78 76.9
AL7G22570 Arabidopsis lyrata HOM05D006545 ORTHO05D007985 4.6e-21 105.1 77 77.9
Carub.0007s1077 Capsella rubella HOM05D006545 ORTHO05D007985 4.6e-21 105.1 77 77.9
Gorai.013G227700 Gossypium raimondii HOM05D006545 ORTHO05D007985 4.6e-21 105.1 79 74.7
arahy.Tifrunner.gnm1.ann1.CH1R66 Arachis hypogaea HOM05D006545 ORTHO05D007985 7.8e-21 104.4 77 75.3
arahy.Tifrunner.gnm1.ann1.S1CX09 Arachis hypogaea HOM05D006545 ORTHO05D007985 7.8e-21 104.4 77 75.3
EL10Ac8g19212 Beta vulgaris HOM05D006545 ORTHO05D007985 7.8e-21 104.4 113 57.5
Medtr4g126270 Medicago truncatula HOM05D000085 ORTHO05D001460 7.8e-21 104.4 77 76.6
AT4G29735 Arabidopsis thaliana HOM05D006545 ORTHO05D007985 1.0e-20 104.0 77 76.6
CARHR237610 Cardamine hirsuta HOM05D006545 ORTHO05D007985 1.0e-20 104.0 77 76.6
unitig_699.g19296 Utricularia gibba HOM05D006545 ORTHO05D007985 1.7e-20 103.2 78 73.1
arahy.Tifrunner.gnm1.ann1.MQ59WG Arachis hypogaea HOM05D000085 ORTHO05D001460 2.3e-20 102.8 76 76.3
BcaNung00485 Brassica carinata HOM05D006545 ORTHO05D007985 2.3e-20 102.8 77 75.3
Ah.09g228260 Amaranthus hybridus HOM05D006545 ORTHO05D007985 3.0e-20 102.4 79 74.7
ATR0749G052 Amborella trichopoda HOM05D006545 ORTHO05D007985 3.0e-20 102.4 79 70.9
A03p59030 Brassica napus HOM05D006545 ORTHO05D007985 3.9e-20 102.1 76 76.3
Lalb_Chr13g0299701 Lupinus albus HOM05D006545 ORTHO05D007985 3.9e-20 102.1 77 74.0
PSO832G3375 Papaver somniferum HOM05D006545 ORTHO05D007985 3.9e-20 102.1 78 69.2
A01p08390 Brassica napus HOM05D000125 ORTHO05D000120 6.6e-20 101.3 77 75.3
BraA01t00787Z Brassica rapa HOM05D000125 ORTHO05D000120 6.6e-20 101.3 77 75.3
PSO063G6244 Papaver somniferum HOM05D006545 ORTHO05D007985 6.6e-20 101.3 78 69.2
MBI04_g31162_MAGBIO Magnolia biondii HOM05D006545 ORTHO05D007985 8.7e-20 100.9 78 70.5
AUR62033964 Chenopodium quinoa HOM05D006545 ORTHO05D007985 1.5e-19 100.1 78 73.1
Lalb_Chr07g0180851 Lupinus albus HOM05D006545 ORTHO05D007985 1.9e-19 99.8 77 74.0
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 1.9e-19 99.8 86 68.6
C03p89150 Brassica napus HOM05D006545 ORTHO05D007985 3.3e-19 99.0 74 75.7
Nitab4.5_0006552g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 3.3e-19 99.0 77 74.0
BcaC09g51752 Brassica carinata HOM05D006545 ORTHO05D007985 4.3e-19 98.6 77 74.0
AUR62029070 Chenopodium quinoa HOM05D006545 ORTHO05D007985 5.6e-19 98.2 78 71.8
BcaC01g01182 Brassica carinata HOM05D006545 ORTHO05D007985 9.6e-19 97.4 74 74.3
Nitab4.5_0004526g0070 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.1e-18 96.3 63 85.7
FAN26G2289 Fragaria x ananassa HOM05D006545 ORTHO05D007985 2.8e-18 95.9 63 79.4
C07p57080 Brassica napus HOM05D006545 ORTHO05D007985 9.0e-17 90.9 63 81.0
BraA03t14963Z Brassica rapa HOM05D006545 ORTHO05D007985 1.2e-16 90.5 98 60.2
SalBow5G5008 Salvia bowleyana HOM05D006545 ORTHO05D007985 4.5e-16 88.6 62 77.4
HPP92_008778 Vanilla planifolia HOM05D006545 ORTHO05D007985 4.5e-16 88.6 61 73.8
Mapoly0003s0235 Marchantia polymorpha HOM05D006545 ORTHO05D007985 9.9e-16 87.4 78 62.8
C01p09720 Brassica napus HOM05D006545 ORTHO05D007985 2.2e-15 86.3 99 57.6
BolC7t46179H Brassica oleracea HOM05D006545 ORTHO05D007985 3.8e-15 85.5 102 55.9
COL.COLO4_18197 Corchorus olitorius HOM05D002302 ORTHO05D002728 6.4e-15 84.7 67 71.6
Pp3c11_23220 Physcomitrium patens HOM05D006545 ORTHO05D007985 6.4e-15 84.7 73 65.8
TAR624G0377 Trochodendron aralioides HOM05D002302 ORTHO05D002728 6.4e-15 84.7 83 62.7
BcaC09g52224 Brassica carinata HOM05D006545 ORTHO05D007985 8.4e-15 84.3 63 76.2
HanXRQChr12g0377121 Helianthus annuus HOM05D006545 ORTHO05D007985 8.4e-15 84.3 56 80.4
Nitab4.5_0004223g0010 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.6e-13 80.1 62 71.0
SMO361G0088 Selaginella moellendorffii HOM05D006545 ORTHO05D007985 1.0e-12 77.4 72 56.9
C01p09580 Brassica napus HOM05D000125 ORTHO05D007985 1.1e-11 73.9 63 71.4
Nitab4.5_0000095g0160 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.1e-10 69.7 73 57.5
C01p09620 Brassica napus HOM05D006545 ORTHO05D007985 2.8e-10 69.3 96 53.1
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 2.4e-09 66.2 81 55.6
A08p19550 Brassica napus HOM05D006545 ORTHO05D007985 3.1e-09 65.9 46 78.3
Lj7C676T8 Lonicera japonica HOM05D006545 ORTHO05D007985 4.5e-08 62.0 37 89.2
Actinidia25251 Actinidia chinensis HOM05D006545 ORTHO05D007985 7.1e-06 54.7 49 71.4
BcaB03g12615 Brassica carinata HOM05D006545 ORTHO05D007985 7.1e-06 54.7 47 61.7


User provided reference genes

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