Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 2.9e-70 268.5 139 100.0
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 3.5e-31 138.7 144 61.1
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 1.6e-28 129.8 150 59.3
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.4e-26 122.1 135 59.3
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 9.9e-26 120.6 135 59.3
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 9.9e-26 120.6 135 59.3
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 2.9e-25 119.0 135 59.3
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.4e-24 115.9 133 59.4
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 3.2e-24 115.5 144 54.2
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 1.5e-21 106.7 123 55.3
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.5e-21 105.9 129 55.8
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 4.3e-21 105.1 149 46.3
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.3e-21 105.1 127 56.7
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 7.3e-21 104.4 127 56.7
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.6e-20 103.2 138 50.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 1.6e-20 103.2 143 52.4
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.8e-20 102.4 150 50.7
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 4.7e-20 101.7 141 53.2
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 4.7e-20 101.7 152 51.3
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 2.4e-19 99.4 144 47.9
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 3.1e-19 99.0 156 48.1
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 8.9e-19 97.4 144 46.5
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 8.9e-19 97.4 132 51.5
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 2.6e-18 95.9 143 49.7
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.4e-18 95.1 137 46.7
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 7.6e-18 94.4 144 46.5
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 7.6e-18 94.4 175 44.6
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 9.9e-18 94.0 142 47.2
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 1.7e-17 93.2 141 47.5
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 2.2e-17 92.8 142 46.5
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 3.8e-17 92.0 135 46.7
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 3.8e-17 92.0 142 47.9
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 3.8e-17 92.0 144 49.3
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.9e-16 89.7 143 49.0
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 3.2e-16 89.0 135 45.9
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 4.2e-16 88.6 134 46.3
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 1.6e-15 86.7 144 47.2
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.7e-15 85.9 141 48.2
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 3.5e-15 85.5 151 41.1
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 4.6e-15 85.1 153 47.1
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.6e-15 85.1 133 47.4
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 4.6e-15 85.1 141 43.3
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 6.0e-15 84.7 141 44.7
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.0e-14 84.0 146 45.9
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 1.7e-14 83.2 141 44.0
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 1.7e-14 83.2 142 44.4
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 2.3e-14 82.8 141 44.7
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 3.0e-14 82.4 138 44.9
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 3.9e-14 82.0 134 45.5
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 6.6e-14 81.3 145 45.5
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 1.5e-13 80.1 133 48.9
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 2.5e-13 79.3 134 44.8
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 3.3e-13 79.0 147 44.2
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 7.3e-13 77.8 144 44.4
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 9.6e-13 77.4 153 40.5
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 9.6e-13 77.4 147 42.9
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 1.3e-12 77.0 132 46.2
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 2.1e-12 76.3 142 42.3
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 3.6e-12 75.5 136 44.1
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 8.1e-12 74.3 141 46.1
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 8.1e-12 74.3 141 46.1
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 1.4e-11 73.6 129 45.7
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 3.1e-11 72.4 134 44.8
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 4.0e-11 72.0 135 41.5
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 5.3e-11 71.6 150 39.3
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 5.3e-11 71.6 137 40.1
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 6.9e-11 71.2 138 46.4
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 9.0e-11 70.9 132 45.5
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 1.2e-10 70.5 143 42.7
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 2.0e-10 69.7 134 47.0
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 4.4e-10 68.6 138 45.7
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 5.8e-10 68.2 133 45.9
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 7.6e-10 67.8 129 41.9
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 1.3e-09 67.0 134 45.5
Nitab4.5_0000235g0170 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.2e-09 66.2 77 55.8
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 4.9e-09 65.1 150 41.3
ATR0605G038 Amborella trichopoda HOM05D007735 ORTHO05D009638 8.4e-09 64.3 112 46.4
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 8.4e-09 64.3 123 38.2
arahy.Tifrunner.gnm1.ann1.Q37N58 Arachis hypogaea HOM05D007735 ORTHO05D009638 2.4e-08 62.8 152 40.1
arahy.Tifrunner.gnm1.ann1.S9U9HD Arachis hypogaea HOM05D007735 ORTHO05D009638 2.4e-08 62.8 152 40.1
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 3.2e-08 62.4 136 39.7
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 2.7e-07 59.3 116 42.2
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 3.5e-07 58.9 135 37.8
Nitab4.5_0004507g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.7e-06 56.6 141 33.3
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 2.3e-06 56.2 129 38.8
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 2.3e-06 56.2 129 38.8
HPP92_018900 Vanilla planifolia HOM05D026889 ORTHO05D009638 8.7e-06 54.3 121 38.8


User provided reference genes

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