Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G186500 Prunus persica HOM05D003539 ORTHO05D004111 3.6e-97 358.2 177 100.0
Prupe.7G186400 Prunus persica HOM05D003539 ORTHO05D004111 4.2e-45 185.3 174 62.1
MD02G1108900 Malus domestica HOM05D003539 ORTHO05D004111 6.9e-32 141.4 160 54.4
FAN23G2523 Fragaria x ananassa HOM05D003539 ORTHO05D004111 9.3e-29 131.0 103 70.9
FAN28G2151 Fragaria x ananassa HOM05D003539 ORTHO05D004111 9.3e-29 131.0 103 70.9
FAN19G1026 Fragaria x ananassa HOM05D003539 ORTHO05D004111 2.1e-28 129.8 103 69.9
FvH4_1g10010 Fragaria vesca HOM05D003539 ORTHO05D004111 2.7e-28 129.4 103 69.9
FAN26G1725 Fragaria x ananassa HOM05D003539 ORTHO05D004111 1.8e-27 126.7 103 68.0
RcHm_v2.0_Chr2g0096801 Rosa chinensis HOM05D003539 ORTHO05D004111 2.3e-27 126.3 102 68.6
Dinv40214 Davidia involucrata HOM05D003539 ORTHO05D004111 2.7e-20 102.8 179 41.3
CSS0035723 Camellia sinensis var. sinensis HOM05D003539 ORTHO05D004111 1.9e-18 96.7 104 51.9
Nn5g28137 Nelumbo nucifera HOM05D003539 ORTHO05D004111 7.4e-18 94.7 101 49.5
Atru.chr3.55 Acer truncatum HOM05D003539 ORTHO05D004111 4.8e-17 92.0 104 51.0
vmacro18474 Vaccinium macrocarpon HOM05D003539 ORTHO05D004111 4.8e-17 92.0 190 37.9
Actinidia28753 Actinidia chinensis HOM05D003539 ORTHO05D004111 8.2e-17 91.3 183 39.3
Hma1.2p1_0085F.1_g044410 Hydrangea macrophylla HOM05D003539 ORTHO05D004111 8.2e-17 91.3 181 39.8
Thecc.01G002200 Theobroma cacao HOM05D003539 ORTHO05D004111 1.1e-16 90.9 106 46.2
Manes.01G157300 Manihot esculenta HOM05D003539 ORTHO05D004111 1.8e-16 90.1 102 49.0
Manes.11G091200 Manihot esculenta HOM05D003539 ORTHO05D004111 3.1e-16 89.4 104 48.1
Eucgr.J02557 Eucalyptus grandis HOM05D003539 ORTHO05D004111 4.1e-16 89.0 107 49.5
TWI79G1391 Tripterygium wilfordii HOM05D003539 ORTHO05D004111 1.2e-15 87.4 103 50.5
MSTRG.20424 Avicennia marina HOM05D003539 ORTHO05D004111 1.5e-15 87.0 103 48.5
Dinv28297 Davidia involucrata HOM05D003539 ORTHO05D004111 2.0e-15 86.7 103 48.5
Rhsim08G0026200 Rhododendron simsii HOM05D003539 ORTHO05D004111 7.6e-15 84.7 184 36.4
Sabra05G0080900 Salix brachista HOM05D003539 ORTHO05D004111 1.0e-14 84.3 102 48.0
TAR381G1444 Trochodendron aralioides HOM05D003539 ORTHO05D004111 3.8e-14 82.4 103 47.6
AUR62000583 Chenopodium quinoa HOM05D003539 ORTHO05D004111 5.0e-14 82.0 100 51.0
CANSAT35G0647 Cannabis sativa HOM05D003539 ORTHO05D004111 6.5e-14 81.6 178 37.1
AUR62006940 Chenopodium quinoa HOM05D003539 ORTHO05D004111 8.4e-14 81.3 101 49.5
Potri.005G098500 Populus trichocarpa HOM05D003539 ORTHO05D004111 8.4e-14 81.3 102 47.1
SalBow7G0297 Salvia bowleyana HOM05D003539 ORTHO05D004111 1.1e-13 80.9 103 46.6
Gohir.D03G066500 Gossypium hirsutum HOM05D003539 ORTHO05D004111 1.9e-13 80.1 107 43.0
Gorai.003G064600 Gossypium raimondii HOM05D003539 ORTHO05D004111 1.9e-13 80.1 107 43.0
Oeu063413.2 Olea europaea HOM05D003539 ORTHO05D004111 1.9e-13 80.1 103 44.7
Duzib147G0916 Durio zibethinus HOM05D003539 ORTHO05D004111 3.2e-13 79.3 106 44.3
Gohir.A02G120000 Gossypium hirsutum HOM05D003539 ORTHO05D004111 4.2e-13 79.0 107 42.1
SGA_v2.0_scaffold36G14401 Striga asiatica HOM05D003539 ORTHO05D004111 9.3e-13 77.8 102 44.1
Ciclev10010647m.g Citrus clementina HOM05D003539 ORTHO05D004111 1.6e-12 77.0 91 50.5
Glyma.09G196200 Glycine max HOM05D003539 ORTHO05D004111 2.1e-12 76.6 177 35.0
Glyma.16G112800 Glycine max HOM05D003539 ORTHO05D004111 4.6e-12 75.5 181 36.5
SGA_v2.0_scaffold172G38971 Striga asiatica HOM05D003539 ORTHO05D004111 6.1e-12 75.1 107 42.1
GSVIVG01026448001 Vitis vinifera HOM05D003539 ORTHO05D004111 6.1e-12 75.1 178 36.0
ClCG02G000270 Citrullus lanatus HOM05D003539 ORTHO05D004111 1.0e-11 74.3 105 43.8
CDE07G0217 Ceratophyllum demersum HOM05D003539 ORTHO05D004111 1.8e-11 73.6 97 42.3
ClCG05G001500 Citrullus lanatus HOM05D003539 ORTHO05D004111 1.8e-11 73.6 104 44.2
AL4G30740 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 2.3e-11 73.2 167 37.1
Oeu010807.1 Olea europaea HOM05D003539 ORTHO05D004111 2.3e-11 73.2 104 46.2
Migut.A00468 Erythranthe guttata HOM05D003539 ORTHO05D004111 3.0e-11 72.8 102 41.2
Sc06g0005250 Simmondsia chinensis HOM05D003539 ORTHO05D004111 3.0e-11 72.8 110 46.4
Sed0003470 Sechium edule HOM05D003539 ORTHO05D004111 3.9e-11 72.4 185 35.1
Cc07_g12170 Coffea canephora HOM05D003539 ORTHO05D004111 5.1e-11 72.0 112 39.3
EL10Ac4g09711 Beta vulgaris HOM05D003539 ORTHO05D004111 6.7e-11 71.6 103 46.6
TAR376G1176 Trochodendron aralioides HOM05D003539 ORTHO05D004111 8.7e-11 71.2 101 44.6
Carub.0004s1644 Capsella rubella HOM05D003539 ORTHO05D004111 1.9e-10 70.1 99 43.4
Ah.06g188300 Amaranthus hybridus HOM05D003539 ORTHO05D004111 4.3e-10 68.9 102 43.1
PGR044G1248 Punica granatum HOM05D003539 ORTHO05D004111 4.3e-10 68.9 103 44.7
Lsat_1_v5_gn_5_30740 Lactuca sativa HOM05D003539 ORTHO05D004111 7.4e-10 68.2 99 42.4
Hund21770 Selenicereus undatus HOM05D003539 ORTHO05D004111 1.3e-09 67.4 102 42.2
Hund28202 Selenicereus undatus HOM05D003539 ORTHO05D004111 1.3e-09 67.4 102 41.2
Hund28214 Selenicereus undatus HOM05D003539 ORTHO05D004111 1.3e-09 67.4 102 41.2
Actinidia20762 Actinidia chinensis HOM05D003539 ORTHO05D004111 3.7e-09 65.9 103 48.5
Aqoxy3G00418 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 3.1e-08 62.8 182 33.5
Phvul.010G020100 Phaseolus vulgaris HOM05D003539 ORTHO05D004111 3.1e-08 62.8 183 34.4
Lj4g0013403 Lotus japonicus HOM05D003539 ORTHO05D004111 4.1e-08 62.4 102 43.1
Nitab4.5_0000588g0180 Nicotiana tabacum HOM05D003539 ORTHO05D004111 4.1e-08 62.4 102 41.2
Thhalv10016395m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 5.3e-08 62.0 168 32.7
Aa31LG10G6570 Aethionema arabicum HOM05D003539 ORTHO05D004111 6.9e-08 61.6 168 31.5
Aqoxy6G01535 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 9.0e-08 61.2 184 33.7
Haze_03640 Corylus avellana HOM05D003539 ORTHO05D004111 9.0e-08 61.2 99 37.4
ECA233G1070 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-08 61.2 181 30.4
VMungo1309G1473 Vigna mungo HOM05D003539 ORTHO05D004111 9.0e-08 61.2 183 33.9
Cfa007110 Carpinus fangiana HOM05D003539 ORTHO05D004111 1.2e-07 60.8 99 37.4
Peaxi162Scf00677g00114 Petunia axillaris HOM05D003539 ORTHO05D004111 1.5e-07 60.5 97 41.2
Ca_21575_v3 Cicer arietinum L. HOM05D003539 ORTHO05D004111 2.6e-07 59.7 162 33.3
HanXRQChr16g0510861 Helianthus annuus HOM05D003539 ORTHO05D004111 3.4e-07 59.3 99 40.4
Sc09g0001980 Simmondsia chinensis HOM05D003539 ORTHO05D004111 3.4e-07 59.3 102 41.2
Peaxi162Scf00344g01722 Petunia axillaris HOM05D003539 ORTHO05D004111 4.5e-07 58.9 104 39.4
Zm00001eb226160 Zea mays HOM05D003539 ORTHO05D004111 4.5e-07 58.9 104 37.5
Lalb_Chr09g0334501 Lupinus albus HOM05D003539 ORTHO05D004111 7.7e-07 58.2 174 35.1
TPR.G29658 Trifolium pratense HOM05D003539 ORTHO05D004111 7.7e-07 58.2 163 38.0
Nitab4.5_0000855g0080 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.0e-06 57.8 102 39.2
AT2G34750 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 1.7e-06 57.0 168 33.9
DCAR_007550 Daucus carota HOM05D003539 ORTHO05D004111 2.2e-06 56.6 106 41.5
Sp4g17040 Schrenkiella parvula HOM05D003539 ORTHO05D004111 2.2e-06 56.6 166 31.9
QL06p053198 Quercus lobata HOM05D003539 ORTHO05D004111 2.9e-06 56.2 98 35.7
PSO017G0405 Papaver somniferum HOM05D003539 ORTHO05D004111 5.0e-06 55.5 96 38.5
Lalb_Chr05g0229501 Lupinus albus HOM05D003539 ORTHO05D004111 8.5e-06 54.7 155 32.9


User provided reference genes

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