Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 4.7e-103 377.9 192 100.0
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 3.9e-89 331.6 191 84.8
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 1.6e-87 326.2 193 85.5
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 2.4e-86 322.4 193 83.4
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 2.4e-86 322.4 192 82.3
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 1.5e-85 319.7 193 79.8
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 4.5e-85 318.2 214 75.7
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 9.9e-85 317.0 184 84.2
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 2.2e-84 315.8 192 81.2
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 1.1e-83 313.5 193 79.8
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 1.4e-83 313.2 191 82.2
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 4.2e-83 311.6 182 84.6
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 9.3e-83 310.5 193 80.3
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 2.7e-82 308.9 192 77.6
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 3.5e-82 308.5 189 80.4
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 4.6e-82 308.1 193 77.7
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 7.9e-82 307.4 193 80.8
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.0e-81 307.0 189 81.5
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 1.3e-81 306.6 193 78.8
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 1.8e-81 306.2 193 78.2
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 6.7e-81 304.3 192 76.6
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 1.5e-80 303.1 191 78.0
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 1.5e-80 303.1 193 78.8
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 1.5e-80 303.1 193 76.7
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 1.5e-80 303.1 192 77.6
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 5.6e-80 301.2 193 79.8
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 1.6e-79 299.7 192 75.5
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 2.8e-79 298.9 189 78.3
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 2.8e-79 298.9 189 75.7
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 2.8e-79 298.9 235 66.0
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 4.8e-79 298.1 192 74.5
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 8.1e-79 297.4 193 77.7
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 1.1e-78 297.0 193 77.2
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 1.8e-78 296.2 191 74.9
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 3.1e-78 295.4 190 76.3
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 1.2e-77 293.5 193 77.2
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 2.0e-77 292.7 191 75.4
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 2.6e-77 292.4 191 73.8
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 3.4e-77 292.0 193 74.6
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 3.4e-77 292.0 191 73.8
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 7.6e-77 290.8 190 78.4
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 8.4e-76 287.3 191 73.8
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 1.1e-75 287.0 189 75.7
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 1.9e-75 286.2 177 81.9
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 2.1e-74 282.7 193 73.1
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 2.1e-74 282.7 193 68.9
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 2.1e-74 282.7 192 69.3
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 3.5e-74 282.0 185 73.5
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 4.6e-74 281.6 191 71.2
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 4.6e-74 281.6 190 71.6
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 6.0e-74 281.2 189 74.1
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 1.0e-73 280.4 185 73.0
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 1.0e-73 280.4 185 74.1
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 1.0e-73 280.4 193 74.1
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.3e-73 280.0 193 68.4
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 1.8e-73 279.6 185 74.1
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 8.7e-73 277.3 193 74.6
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.5e-72 276.6 193 67.4
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 4.3e-72 275.0 193 69.9
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 5.6e-72 274.6 230 67.0
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 1.6e-71 273.1 189 67.7
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 2.1e-71 272.7 186 72.6
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 3.1e-70 268.9 169 76.3
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 5.3e-70 268.1 189 65.1
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 5.3e-70 268.1 177 73.4
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 6.9e-70 267.7 193 68.9
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 2.0e-69 266.2 164 81.1
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 2.0e-69 266.2 164 81.1
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 2.9e-68 262.3 154 84.4
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 1.4e-67 260.0 175 71.4
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 3.5e-66 255.4 191 62.8
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 4.6e-66 255.0 153 83.0
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 7.9e-66 254.2 171 72.5
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 1.0e-65 253.8 160 80.0
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 4.8e-63 245.0 198 63.1
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 3.1e-62 242.3 154 73.4
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 4.5e-61 238.4 169 68.6
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 1.1e-59 233.8 138 84.1
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 1.9e-59 233.0 138 84.1
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 1.2e-50 203.8 125 79.2
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 3.6e-50 202.2 207 55.1
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 6.7e-49 198.0 120 79.2
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.7e-47 192.2 153 69.3
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.8e-44 182.2 117 80.3
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 2.5e-43 179.5 118 70.3
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 2.3e-41 172.9 213 46.5
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 1.9e-35 153.3 103 72.8
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 1.6e-34 150.2 90 85.6
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 2.7e-34 149.4 133 56.4
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 1.2e-32 144.1 107 70.1
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 7.0e-30 134.8 77 85.7
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 3.5e-29 132.5 79 79.7
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 4.5e-29 132.1 139 56.8
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 7.7e-29 131.3 189 42.9
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 1.9e-27 126.7 76 82.9
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 2.7e-26 122.9 70 84.3
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 2.8e-23 112.8 184 38.0
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 8.3e-23 111.3 184 39.1
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 9.1e-22 107.8 193 36.8
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 9.1e-22 107.8 184 38.0
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 2.9e-20 102.8 130 38.5
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 2.8e-18 96.3 173 39.3
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 6.1e-18 95.1 60 76.7
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 3.0e-17 92.8 129 45.0
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 1.5e-16 90.5 73 61.6
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 4.4e-16 89.0 60 75.0
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 1.7e-15 87.0 169 35.5
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 3.7e-15 85.9 56 69.6
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 2.3e-09 66.6 63 54.0
arahy.Tifrunner.gnm1.ann1.BGC890 Arachis hypogaea HOM05D006972 ORTHO05D008519 1.2e-08 64.3 61 50.8
RcHm_v2.0_Chr5g0015211 Rosa chinensis HOM05D006972 ORTHO05D008519 4.4e-08 62.4 33 84.8
AagrBONN_evm.TU.Sc2ySwM_228.4669 Anthoceros agrestis HOM05D006972 ORTHO05D008519 4.1e-06 55.8 67 37.3


User provided reference genes

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