Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 4.9e-117 424.5 215 100.0
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 6.5e-93 344.4 215 82.3
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 2.1e-83 312.8 216 76.4
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.6e-81 305.8 221 75.6
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 9.7e-81 303.9 220 76.8
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 4.5e-78 295.0 223 71.7
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 3.8e-77 292.0 217 70.0
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 3.2e-76 288.9 220 70.5
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 5.5e-76 288.1 215 70.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 2.1e-75 286.2 225 69.8
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 4.7e-75 285.0 219 69.4
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 5.2e-74 281.6 225 68.0
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 6.8e-74 281.2 217 70.0
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 6.8e-74 281.2 217 70.0
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.2e-73 280.4 225 68.4
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 1.5e-73 280.0 216 70.8
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.6e-73 279.3 214 74.3
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.6e-73 279.3 221 68.8
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 4.4e-73 278.5 225 67.6
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 5.7e-73 278.1 217 66.8
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.7e-72 276.6 219 71.7
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 2.2e-72 276.2 233 65.2
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 4.8e-72 275.0 223 65.9
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.4e-71 273.5 219 67.1
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 1.8e-71 273.1 228 65.8
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 2.4e-71 272.7 220 67.7
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 3.1e-71 272.3 221 70.1
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 7.0e-71 271.2 221 69.2
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 1.6e-70 270.0 241 66.0
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 2.7e-70 269.2 233 63.9
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 3.5e-70 268.9 223 67.7
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 7.7e-70 267.7 220 66.8
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.7e-69 266.5 222 64.4
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 5.0e-69 265.0 226 66.8
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 2.5e-68 262.7 217 65.0
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 2.5e-68 262.7 222 64.9
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 3.2e-68 262.3 236 62.3
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 4.2e-68 261.9 151 84.1
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 7.2e-68 261.2 216 65.7
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.2e-67 260.4 150 85.3
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 6.1e-67 258.1 218 65.1
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 6.1e-67 258.1 216 64.8
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 8.0e-67 257.7 223 63.2
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 8.0e-67 257.7 216 64.4
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 1.4e-66 256.9 217 65.9
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 4.0e-66 255.4 225 66.7
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.8e-66 254.6 211 66.4
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 8.8e-66 254.2 215 64.2
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.2e-65 253.8 227 62.6
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 3.4e-65 252.3 222 62.6
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 4.4e-65 251.9 225 62.2
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.3e-64 250.4 175 74.3
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 2.2e-64 249.6 209 63.6
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 2.8e-64 249.2 215 63.7
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 3.7e-64 248.8 218 62.8
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 3.7e-64 248.8 218 63.8
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.4e-63 246.1 216 63.9
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 7.0e-63 244.6 202 64.4
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 2.0e-62 243.0 197 65.5
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 4.5e-62 241.9 218 59.6
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 7.7e-62 241.1 219 62.1
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.0e-61 240.7 175 71.4
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 1.0e-61 240.7 219 61.6
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 1.0e-61 240.7 150 77.3
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.3e-61 240.4 215 59.5
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 1.7e-61 240.0 226 60.2
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 3.8e-61 238.8 227 63.0
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 8.6e-61 237.7 219 61.2
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 3.3e-60 235.7 151 76.8
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.6e-60 235.0 136 84.6
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.1e-59 233.0 216 60.6
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 2.1e-59 233.0 219 59.8
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 4.7e-59 231.9 221 59.3
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 6.1e-59 231.5 215 60.0
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.0e-58 230.7 149 73.8
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.4e-58 230.3 150 78.0
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.4e-58 230.3 192 67.2
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 2.3e-58 229.6 148 76.4
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 5.2e-58 228.4 191 63.4
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 8.9e-58 227.6 152 73.0
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 4.4e-57 225.3 217 57.1
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 5.7e-57 224.9 215 58.6
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 2.9e-56 222.6 158 70.9
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 5.4e-55 218.4 221 57.5
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.4e-55 218.4 211 58.8
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 7.0e-55 218.0 221 56.1
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 7.0e-55 218.0 221 56.1
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 7.0e-55 218.0 191 62.3
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 7.8e-54 214.5 203 61.1
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 3.9e-53 212.2 211 55.0
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 3.9e-53 212.2 128 78.9
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 4.3e-52 208.8 216 51.9
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 2.1e-51 206.5 218 56.4
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 2.8e-51 206.1 229 53.7
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 4.7e-51 205.3 217 54.4
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 6.2e-51 204.9 168 61.9
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 4.0e-50 202.2 154 62.3
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 2.6e-49 199.5 109 90.8
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 4.9e-48 195.3 234 52.6
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 6.4e-48 194.9 163 66.3
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 2.7e-46 189.5 109 84.4
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 1.3e-45 187.2 131 67.9
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 6.2e-43 178.3 110 81.8
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 4.4e-41 172.2 157 64.3
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 3.5e-38 162.5 180 54.4
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 8.6e-37 157.9 151 58.9
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 8.9e-34 147.9 166 51.8
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 3.8e-32 142.5 72 95.8
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.1e-31 141.0 151 53.0
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 5.4e-31 138.7 94 70.2
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 6.9e-26 121.7 146 41.1
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 6.0e-22 108.6 68 76.5
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 6.0e-22 108.6 68 76.5
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 3.8e-16 89.4 107 50.5
MD15G1239000 Malus domestica HOM05D006610 ORTHO05D245316 4.9e-16 89.0 86 55.8
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 8.4e-16 88.2 58 69.0
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 3.0e-13 79.7 49 77.6


User provided reference genes

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