Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 1.6e-291 1005.4 505 100.0
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 2.5e-244 848.6 515 83.5
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 1.3e-216 756.5 528 75.4
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 3.5e-206 721.8 522 72.8
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 7.8e-206 720.7 522 72.6
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 7.3e-204 714.1 535 70.8
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 3.8e-200 701.8 525 71.0
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 8.4e-200 700.7 515 70.7
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 6.9e-194 681.0 551 65.5
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 9.0e-194 680.6 513 68.2
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 1.1e-188 663.7 524 67.6
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 4.5e-185 651.7 522 66.3
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 5.8e-185 651.4 515 65.6
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 6.5e-184 647.9 516 66.5
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 1.3e-181 640.2 521 63.9
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 3.9e-181 638.6 516 64.9
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.5e-180 636.7 515 64.7
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 1.9e-180 636.3 517 65.0
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 4.3e-180 635.2 515 64.3
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 4.8e-179 631.7 511 64.2
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.4e-178 630.2 520 64.6
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 9.0e-178 627.5 518 65.4
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.7e-176 623.2 520 64.0
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 3.8e-176 622.1 520 64.0
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 3.2e-175 619.0 543 61.1
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 5.5e-175 618.2 522 62.1
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.2e-174 617.1 515 63.3
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.8e-173 613.2 515 61.2
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 3.0e-173 612.5 516 62.0
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 1.1e-172 610.5 549 60.7
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 5.9e-169 598.2 515 61.4
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 8.5e-168 594.3 512 60.2
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 8.5e-168 594.3 493 62.5
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 1.4e-167 593.6 531 60.5
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 9.1e-162 574.3 512 59.8
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 6.5e-160 568.2 535 58.3
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 6.5e-160 568.2 504 57.7
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 8.5e-160 567.8 519 60.3
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 8.5e-160 567.8 522 57.7
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 5.5e-159 565.1 517 59.2
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 5.5e-159 565.1 519 59.7
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 1.0e-157 560.8 585 52.8
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 3.0e-157 559.3 515 59.8
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 8.8e-157 557.8 517 58.4
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 2.6e-156 556.2 520 58.1
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 5.7e-156 555.1 524 58.0
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 6.3e-155 551.6 469 62.5
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.1e-154 550.8 521 58.9
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 3.1e-154 549.3 515 58.4
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 5.3e-154 548.5 516 56.2
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 1.6e-153 547.0 520 57.3
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 5.9e-153 545.0 517 56.5
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 8.5e-152 541.2 471 59.2
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 1.9e-151 540.0 518 56.4
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 2.7e-150 536.2 515 56.7
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 4.7e-150 535.4 514 57.0
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 4.7e-150 535.4 550 56.4
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 6.1e-150 535.0 509 57.6
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 1.0e-149 534.3 427 63.2
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 3.0e-149 532.7 514 55.8
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 5.7e-148 528.5 522 55.4
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 9.7e-148 527.7 498 57.2
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 2.2e-147 526.6 516 54.8
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 2.8e-147 526.2 514 57.4
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 2.8e-147 526.2 516 55.8
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 8.2e-147 524.6 512 56.6
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 4.1e-146 522.3 517 55.9
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 9.1e-146 521.2 533 53.1
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 7.7e-145 518.1 482 57.9
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 1.1e-143 514.2 449 59.2
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 5.5e-143 511.9 476 57.6
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 1.6e-142 510.4 505 55.2
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 5.2e-141 505.4 457 57.5
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 3.4e-140 502.7 515 54.0
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 2.8e-139 499.6 548 52.6
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 6.3e-139 498.4 511 54.2
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 1.8e-138 496.9 503 54.7
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 3.1e-138 496.1 526 51.7
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 5.4e-138 495.4 517 53.4
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 7.7e-137 491.5 436 59.6
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 8.5e-136 488.0 422 60.9
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 2.5e-135 486.5 467 56.5
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 1.8e-133 480.3 466 56.4
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 4.1e-130 469.2 497 53.7
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 7.0e-130 468.4 467 55.7
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 1.2e-129 467.6 422 58.3
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 4.3e-127 459.1 394 59.4
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 3.4e-124 449.5 536 47.0
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 1.1e-122 444.5 440 56.1
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 3.5e-121 439.5 536 47.6
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 2.3e-120 436.8 531 48.2
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.9e-119 433.7 364 60.2
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 7.3e-119 431.8 517 48.7
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 2.0e-116 423.7 462 52.4
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 7.0e-114 415.2 517 47.0
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 9.2e-114 414.8 381 55.9
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 5.1e-104 382.5 432 49.3
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 2.2e-75 287.3 442 38.2
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 2.9e-75 287.0 446 39.9
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 2.4e-74 283.9 283 56.9
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 4.2e-74 283.1 347 48.7
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 3.1e-69 266.9 441 38.8
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 4.5e-68 263.1 468 38.5
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.6e-49 201.4 110 87.3
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 2.1e-41 174.5 318 35.5
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 6.5e-35 152.9 93 76.3
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 7.5e-31 139.4 507 27.2
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 2.7e-28 131.0 421 27.1
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 1.9e-26 124.8 359 32.3
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.7e-23 113.2 107 55.1
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.7e-23 113.2 107 55.1
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.7e-22 111.7 129 47.3
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.7e-22 111.7 129 47.3
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 4.1e-21 107.1 557 23.5
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 2.3e-16 91.3 98 49.0
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 5.2e-08 63.5 96 41.7
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 5.7e-07 60.1 48 58.3


User provided reference genes

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