Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G169600 Prunus persica HOM05D006469 ORTHO05D008034 6.0e-97 357.5 175 100.0
FvH4_1g11701 Fragaria vesca HOM05D006469 ORTHO05D008034 1.4e-74 283.1 168 82.7
RcHm_v2.0_Chr2g0099281 Rosa chinensis HOM05D006469 ORTHO05D008034 1.8e-72 276.2 169 81.7
MD02G1130100 Malus domestica HOM05D006469 ORTHO05D008034 1.1e-71 273.5 161 83.9
FAN19G1692 Fragaria x ananassa HOM05D006469 ORTHO05D008034 2.6e-71 272.3 164 81.7
FAN26G2561 Fragaria x ananassa HOM05D006469 ORTHO05D008034 4.7e-65 251.5 152 79.6
Dinv33650 Davidia involucrata HOM05D006469 ORTHO05D008034 8.8e-64 247.3 182 69.2
FAN23G0491 Fragaria x ananassa HOM05D000153 ORTHO05D000118 8.8e-64 247.3 140 82.1
Ciclev10026134m.g Citrus clementina HOM05D006469 ORTHO05D008034 1.1e-63 246.9 168 72.0
Haze_03751 Corylus avellana HOM05D006469 ORTHO05D008034 9.7e-63 243.8 181 65.7
Psat4g100640 Pisum sativum HOM05D006469 ORTHO05D008034 9.7e-63 243.8 178 66.3
Lalb_Chr05g0229831 Lupinus albus HOM05D006469 ORTHO05D008034 2.8e-62 242.3 173 68.8
QL06p050760 Quercus lobata HOM05D006469 ORTHO05D008034 3.7e-62 241.9 187 66.3
GSVIVG01018765001 Vitis vinifera HOM05D006469 ORTHO05D008034 3.7e-62 241.9 168 69.0
Medtr8g075480 Medicago truncatula HOM05D006469 ORTHO05D008034 8.2e-62 240.7 180 65.6
Lj4g0017154 Lotus japonicus HOM05D006469 ORTHO05D008034 1.1e-61 240.4 179 65.9
QL06p050655 Quercus lobata HOM05D006469 ORTHO05D008034 3.1e-61 238.8 187 65.8
TPR.G24083 Trifolium pratense HOM05D006469 ORTHO05D008034 3.1e-61 238.8 179 64.8
Lj4A220G94 Lonicera japonica HOM05D006469 ORTHO05D008034 9.1e-61 237.3 170 68.8
Manes.02G105600 Manihot esculenta HOM05D006469 ORTHO05D008034 1.2e-60 236.9 164 68.3
VMungo0251G1912 Vigna mungo HOM05D006469 ORTHO05D008034 2.6e-60 235.7 177 65.0
Thecc.01G016800 Theobroma cacao HOM05D006469 ORTHO05D008034 3.5e-60 235.3 164 67.1
Cpa.g.sc6.265 Carica papaya HOM05D006469 ORTHO05D008034 4.5e-60 235.0 163 72.4
Glyma.02G047300 Glycine max HOM05D006469 ORTHO05D008034 5.9e-60 234.6 167 68.9
Gohir.A02G171200 Gossypium hirsutum HOM05D006469 ORTHO05D008034 7.7e-60 234.2 173 64.2
Gorai.003G009100 Gossypium raimondii HOM05D006469 ORTHO05D008034 1.7e-59 233.0 174 64.9
Thhalv10025786m.g Eutrema salsugineum HOM05D006469 ORTHO05D008034 2.2e-59 232.6 159 71.7
Phvul.003G263600 Phaseolus vulgaris HOM05D006469 ORTHO05D008034 2.2e-59 232.6 178 64.6
Potri.007G057000 Populus trichocarpa HOM05D006469 ORTHO05D008034 2.2e-59 232.6 172 67.4
Gohir.D03G008900 Gossypium hirsutum HOM05D006469 ORTHO05D008034 2.9e-59 232.3 174 64.9
Sp7g33770 Schrenkiella parvula HOM05D006469 ORTHO05D008034 3.8e-59 231.9 164 70.1
Sabra07G0048900 Salix brachista HOM05D006469 ORTHO05D008034 6.5e-59 231.1 172 67.4
CiPaw.07G059900 Carya illinoinensis HOM05D006469 ORTHO05D008034 8.5e-59 230.7 189 60.8
AT4G35987 Arabidopsis thaliana HOM05D006469 ORTHO05D008034 1.5e-58 229.9 165 69.1
arahy.Tifrunner.gnm1.ann1.DLPQ3A Arachis hypogaea HOM05D006469 ORTHO05D008034 1.5e-58 229.9 177 66.1
BolC1t00288H Brassica oleracea HOM05D006469 ORTHO05D008034 7.2e-58 227.6 165 66.1
C01p03020 Brassica napus HOM05D006469 ORTHO05D008034 9.4e-58 227.3 165 66.1
BcaNung00773 Brassica carinata HOM05D006469 ORTHO05D008034 1.2e-57 226.9 167 65.3
Carub.0007s0423 Capsella rubella HOM05D006469 ORTHO05D008034 1.2e-57 226.9 161 69.6
Sc07g0001050 Simmondsia chinensis HOM05D006469 ORTHO05D008034 1.6e-57 226.5 165 66.7
arahy.Tifrunner.gnm1.ann1.S7P5W6 Arachis hypogaea HOM05D006469 ORTHO05D008034 2.1e-57 226.1 177 65.5
MELO3C007914.2 Cucumis melo HOM05D006469 ORTHO05D008034 2.1e-57 226.1 175 64.6
BraA01t00258Z Brassica rapa HOM05D006469 ORTHO05D008034 3.6e-57 225.3 167 65.9
A01p02720 Brassica napus HOM05D006469 ORTHO05D008034 1.0e-56 223.8 167 65.3
CsaV3_6G047220 Cucumis sativus L. HOM05D006469 ORTHO05D008034 1.0e-56 223.8 175 64.0
Atru.chr3.815 Acer truncatum HOM05D006469 ORTHO05D008034 1.4e-56 223.4 170 68.8
Migut.L00672 Erythranthe guttata HOM05D006469 ORTHO05D008034 6.8e-56 221.1 174 60.3
CARHR244380 Cardamine hirsuta HOM05D006469 ORTHO05D008034 1.2e-55 220.3 164 65.9
CAN.G1817.1 Capsicum annuum HOM05D006469 ORTHO05D008034 1.5e-55 219.9 181 58.0
SalBow5G1778 Salvia bowleyana HOM05D006469 ORTHO05D008034 5.7e-55 218.0 167 64.7
Aa31LG6G12960 Aethionema arabicum HOM05D006469 ORTHO05D008034 7.5e-55 217.6 169 65.7
TAR376G0066 Trochodendron aralioides HOM05D006469 ORTHO05D008034 1.3e-54 216.9 186 61.3
Eucgr.I02338 Eucalyptus grandis HOM05D006469 ORTHO05D008034 2.8e-54 215.7 178 64.0
Hund14051 Selenicereus undatus HOM05D006469 ORTHO05D008034 8.3e-54 214.2 184 58.7
CANSAT25G3534 Cannabis sativa HOM05D006469 ORTHO05D008034 1.1e-53 213.8 181 61.9
CANSAT25G3476 Cannabis sativa HOM05D006469 ORTHO05D008034 1.8e-53 213.0 182 62.6
Lsat_1_v5_gn_2_76041 Lactuca sativa HOM05D006469 ORTHO05D008034 1.8e-53 213.0 181 62.4
Migut.L00699 Erythranthe guttata HOM05D006469 ORTHO05D008034 3.1e-53 212.2 175 58.9
PGR102G1692 Punica granatum HOM05D006469 ORTHO05D008034 3.1e-53 212.2 180 60.0
QL11p035074 Quercus lobata HOM05D006469 ORTHO05D008034 3.1e-53 212.2 243 50.6
PGSC0003DMG402022530 Solanum tuberosum HOM05D006469 ORTHO05D008034 3.1e-53 212.2 168 61.9
Sopen03g006220 Solanum pennellii HOM05D006469 ORTHO05D008034 4.1e-53 211.8 168 61.3
MSTRG.3610 Avicennia marina HOM05D006469 ORTHO05D008034 1.6e-52 209.9 173 60.7
Cfa006983 Carpinus fangiana HOM05D006469 ORTHO05D008034 4.5e-52 208.4 166 62.0
TWI73G0981 Tripterygium wilfordii HOM05D006469 ORTHO05D008034 4.5e-52 208.4 164 64.0
Solyc03g033470.3 Solanum lycopersicum HOM05D006469 ORTHO05D008034 5.9e-52 208.0 168 60.1
PSO170G4882 Papaver somniferum HOM05D006469 ORTHO05D008034 5.0e-51 204.9 175 60.0
Ah.03g148920 Amaranthus hybridus HOM05D006469 ORTHO05D008034 8.5e-51 204.1 159 62.9
AUR62029479 Chenopodium quinoa HOM05D006469 ORTHO05D008034 1.9e-50 203.0 172 62.8
Cc07_g10870 Coffea canephora HOM05D006469 ORTHO05D008034 3.2e-50 202.2 176 59.1
Nn6g32040 Nelumbo nucifera HOM05D006469 ORTHO05D008034 3.2e-50 202.2 187 55.1
HanXRQChr04g0119941 Helianthus annuus HOM05D006469 ORTHO05D008034 6.1e-49 198.0 178 59.6
EL10Ac6g15486 Beta vulgaris HOM05D006469 ORTHO05D008034 1.4e-48 196.8 172 62.8
Actinidia17434 Actinidia chinensis HOM05D006469 ORTHO05D008034 5.2e-48 194.9 172 58.1
unitig_46.g18721 Utricularia gibba HOM05D006469 ORTHO05D008034 2.0e-47 193.0 170 57.1
PSO700G0153 Papaver somniferum HOM05D006469 ORTHO05D008034 7.5e-47 191.0 143 64.3
Os03g0243800 Oryza sativa ssp. japonica HOM05D006469 ORTHO05D008034 7.0e-45 184.5 184 51.6
Nitab4.5_0003548g0050 Nicotiana tabacum HOM05D006469 ORTHO05D008034 1.2e-44 183.7 139 63.3
Oeu005141.2 Olea europaea HOM05D006469 ORTHO05D008034 4.5e-44 181.8 181 55.2
Zm00001eb398850 Zea mays HOM05D006469 ORTHO05D008034 6.6e-43 177.9 178 52.2
BcaC03g14989 Brassica carinata HOM05D006469 ORTHO05D008034 8.6e-43 177.6 165 57.6
Aqoxy5G01802 Aquilegia oxysepala HOM05D006469 ORTHO05D008034 2.5e-42 176.0 173 53.2
Hma1.2p1_0258F.1_g104050 Hydrangea macrophylla HOM05D006469 ORTHO05D008034 9.5e-42 174.1 107 77.6
ATR0810G135 Amborella trichopoda HOM05D006469 ORTHO05D008034 1.0e-40 170.6 182 49.5
ECA238G1797 Erigeron canadensis HOM05D006469 ORTHO05D008034 1.8e-40 169.9 194 49.5
Nitab4.5_0000864g0140 Nicotiana tabacum HOM05D006469 ORTHO05D008034 2.3e-40 169.5 183 51.9
CSS0000310 Camellia sinensis var. sinensis HOM05D006469 ORTHO05D008034 5.2e-40 168.3 163 58.9
C09p44210 Brassica napus HOM05D006469 ORTHO05D008034 8.9e-40 167.5 171 55.6
CDE02G4243 Ceratophyllum demersum HOM05D006469 ORTHO05D008034 1.2e-39 167.2 169 48.5
SGA_v2.0_scaffold45G17085 Striga asiatica HOM05D006469 ORTHO05D008034 2.6e-39 166.0 258 36.4
CSS0021178 Camellia sinensis var. sinensis HOM05D006469 ORTHO05D008034 2.2e-38 162.9 163 57.1
BcaC04g20386 Brassica carinata HOM05D006469 ORTHO05D008034 2.4e-37 159.5 161 55.3
BcaC04g20390 Brassica carinata HOM05D006469 ORTHO05D008034 2.4e-37 159.5 161 55.3
BolC9t57293H Brassica oleracea HOM05D006469 ORTHO05D008034 2.4e-37 159.5 161 55.3
ClCG01G020380 Citrullus lanatus HOM05D000348 ORTHO05D000244 2.7e-36 156.0 201 47.8
Mapoly0087s0053 Marchantia polymorpha HOM05D006469 ORTHO05D008034 2.3e-35 152.9 174 45.4
AUR62003357 Chenopodium quinoa HOM05D006469 ORTHO05D008034 2.9e-35 152.5 86 82.6
MBI05_g33508_MAGBIO Magnolia biondii HOM05D006469 ORTHO05D008034 5.6e-34 148.3 88 77.3
THA.LOC104807502 Tarenaya hassleriana HOM05D006469 ORTHO05D008034 7.3e-34 147.9 93 75.3
Pp3c16_25190 Physcomitrium patens HOM05D006469 ORTHO05D008034 9.5e-34 147.5 169 45.6
Sed0020941 Sechium edule HOM05D006469 ORTHO05D008034 6.2e-33 144.8 84 81.0
Nitab4.5_0008011g0040 Nicotiana tabacum HOM05D006469 ORTHO05D008034 3.1e-32 142.5 182 44.0
Actinidia22967 Actinidia chinensis HOM05D006469 ORTHO05D008034 5.8e-31 138.3 153 49.7
Peaxi162Scf00328g00828 Petunia axillaris HOM05D006469 ORTHO05D008034 1.4e-29 133.7 238 39.1
Sabra05G0092400 Salix brachista HOM05D006469 ORTHO05D008034 1.4e-29 133.7 149 49.7
BolC2t08600H Brassica oleracea HOM05D006469 ORTHO05D008034 6.8e-24 114.8 137 46.7
Hma1.2p1_0258F.1_g104040 Hydrangea macrophylla HOM05D006469 ORTHO05D008034 2.6e-23 112.8 60 86.7
Ca_22385_v3 Cicer arietinum L. HOM05D006469 ORTHO05D008034 1.7e-22 110.2 62 83.9
DCAR_021507 Daucus carota HOM05D006469 ORTHO05D008034 1.9e-21 106.7 115 49.6
Duzib147G1015 Durio zibethinus HOM05D006469 ORTHO05D008034 3.6e-17 92.4 87 50.6
SMO361G0665 Selaginella moellendorffii HOM05D006469 ORTHO05D008034 4.7e-17 92.0 58 65.5
Manes.01G147000 Manihot esculenta HOM05D006469 ORTHO05D008034 8.1e-17 91.3 148 44.6
COL.COLO4_22441 Corchorus olitorius HOM05D006469 ORTHO05D008034 1.5e-15 87.0 73 56.2
Nitab4.5_0000438g0170 Nicotiana tabacum HOM05D006469 ORTHO05D008034 4.9e-14 82.0 70 60.0
C02p25250 Brassica napus HOM05D006469 ORTHO05D008034 5.8e-07 58.5 57 50.9
HPP92_022639 Vanilla planifolia HOM05D006469 ORTHO05D008034 7.6e-07 58.2 80 38.8


User provided reference genes

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