Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G167900 Prunus persica HOM05D008224 ORTHO05D010083 8.6e-54 213.4 107 100.0
QL12p007153 Quercus lobata HOM05D008224 ORTHO05D010083 2.0e-26 122.5 106 65.1
QL06p032684 Quercus lobata HOM05D008224 ORTHO05D010083 2.6e-26 122.1 106 64.2
Haze_03767 Corylus avellana HOM05D008224 ORTHO05D010083 3.5e-23 111.7 90 67.8
Potri.005G114500 Populus trichocarpa HOM05D008224 ORTHO05D010083 6.7e-22 107.5 110 61.8
Atru.chr4.381 Acer truncatum HOM05D008224 ORTHO05D010083 4.3e-21 104.8 107 60.7
CiPaw.08G131800 Carya illinoinensis HOM05D008224 ORTHO05D010083 7.4e-21 104.0 97 62.9
Lalb_Chr09g0321801 Lupinus albus HOM05D008224 ORTHO05D010083 9.6e-21 103.6 103 62.1
Aqoxy5G01777 Aquilegia oxysepala HOM05D008224 ORTHO05D010083 1.6e-20 102.8 108 56.5
COL.COLO4_21914 Corchorus olitorius HOM05D008224 ORTHO05D010083 2.1e-20 102.4 106 65.1
Solyc02g083930.1 Solanum lycopersicum HOM05D008224 ORTHO05D010083 2.1e-20 102.4 101 57.4
Sopen02g028710 Solanum pennellii HOM05D008224 ORTHO05D010083 3.7e-20 101.7 101 57.4
PGSC0003DMG400003638 Solanum tuberosum HOM05D008224 ORTHO05D010083 4.8e-20 101.3 101 57.4
Thecc.01G019300 Theobroma cacao HOM05D008224 ORTHO05D010083 8.1e-20 100.5 101 64.4
Lj4P218T44 Lonicera japonica HOM05D008224 ORTHO05D010083 1.8e-19 99.4 112 55.4
Peaxi162Scf00083g00052 Petunia axillaris HOM05D008224 ORTHO05D010083 2.4e-19 99.0 100 55.0
Sabra05G0093700 Salix brachista HOM05D008224 ORTHO05D010083 6.9e-19 97.4 110 58.2
Gohir.A10G098400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 9.0e-19 97.1 104 60.6
Phvul.002G109500 Phaseolus vulgaris HOM05D008224 ORTHO05D010083 9.0e-19 97.1 87 60.9
CSS0002084 Camellia sinensis var. sinensis HOM05D008224 ORTHO05D010083 3.4e-18 95.1 124 50.8
Glyma.01G166900 Glycine max HOM05D008224 ORTHO05D010083 3.4e-18 95.1 91 62.6
Gorai.011G098500 Gossypium raimondii HOM05D008224 ORTHO05D010083 3.4e-18 95.1 104 58.7
Nitab4.5_0003271g0030 Nicotiana tabacum HOM05D008224 ORTHO05D010083 3.4e-18 95.1 97 51.5
TAR625G0799 Trochodendron aralioides HOM05D008224 ORTHO05D010083 3.4e-18 95.1 93 59.1
Manes.02G104200 Manihot esculenta HOM05D008224 ORTHO05D010083 4.5e-18 94.7 99 55.6
Medtr5g021840 Medicago truncatula HOM05D008224 ORTHO05D010083 4.5e-18 94.7 99 60.6
Psat2g155040 Pisum sativum HOM05D008224 ORTHO05D010083 4.5e-18 94.7 100 58.0
Nitab4.5_0006286g0060 Nicotiana tabacum HOM05D008224 ORTHO05D010083 5.8e-18 94.4 97 52.6
Gohir.D10G089800 Gossypium hirsutum HOM05D008224 ORTHO05D010083 9.9e-18 93.6 104 57.7
Glyma.11G076300 Glycine max HOM05D008224 ORTHO05D010083 1.7e-17 92.8 93 62.4
TAR381G1028 Trochodendron aralioides HOM05D008224 ORTHO05D010083 1.7e-17 92.8 104 57.7
FvH4_1g11880 Fragaria vesca HOM05D008224 ORTHO05D010083 4.9e-17 91.3 90 62.2
FAN19G0355 Fragaria x ananassa HOM05D008224 ORTHO05D010083 4.9e-17 91.3 90 62.2
Oeu064592.1 Olea europaea HOM05D008224 ORTHO05D010083 4.2e-16 88.2 100 51.0
Ciclev10027456m.g Citrus clementina HOM05D008224 ORTHO05D010083 5.5e-16 87.8 122 52.5
Gorai.003G009900 Gossypium raimondii HOM05D008224 ORTHO05D010083 7.1e-16 87.4 103 53.4
CARHR281490 Cardamine hirsuta HOM05D014245 ORTHO05D010083 4.6e-15 84.7 85 51.8
TPR.G18188 Trifolium pratense HOM05D008224 ORTHO05D010083 4.6e-15 84.7 82 59.8
Hma1.2p1_0258F.1_g104170 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 6.0e-15 84.3 79 63.3
Nn5g30159 Nelumbo nucifera HOM05D008224 ORTHO05D010083 6.0e-15 84.3 91 53.8
Gohir.D11G183450 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.8e-14 82.8 101 55.4
Thhalv10005172m.g Eutrema salsugineum HOM05D014245 ORTHO05D010083 5.1e-14 81.3 99 49.5
FAN26G2375 Fragaria x ananassa HOM05D011822 ORTHO05D010083 8.7e-14 80.5 78 62.8
Carub.0008s2826 Capsella rubella HOM05D014245 ORTHO05D010083 1.1e-13 80.1 98 51.0
Hma1.2p1_0956F.1_g241380 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 1.1e-13 80.1 87 58.6
Hma1.2p1_2239F.1_g317816 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 1.1e-13 80.1 87 58.6
Ca_25829_v3 Cicer arietinum L. HOM05D008224 ORTHO05D010083 1.5e-13 79.7 98 54.1
Gohir.A11G175668 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.9e-13 79.3 103 53.4
Nn1g05883 Nelumbo nucifera HOM05D008224 ORTHO05D010083 1.9e-13 79.3 91 51.6
Gorai.007G195300 Gossypium raimondii HOM05D008224 ORTHO05D010083 3.3e-13 78.6 107 53.3
AL8G45290 Arabidopsis lyrata HOM05D014245 ORTHO05D010083 4.3e-13 78.2 83 49.4
Actinidia28703 Actinidia chinensis HOM05D008224 ORTHO05D010083 2.8e-12 75.5 113 45.1
CsaV3_6G047070 Cucumis sativus L. HOM05D008224 ORTHO05D010083 8.2e-12 73.9 97 51.5
Sp2g30460 Schrenkiella parvula HOM05D014245 ORTHO05D010083 1.1e-11 73.6 94 47.9
ATR0627G002 Amborella trichopoda HOM05D008224 ORTHO05D010083 4.0e-11 71.6 91 50.5
MELO3C007900.2 Cucumis melo HOM05D008224 ORTHO05D010083 6.9e-11 70.9 97 50.5
Cc07_g10680 Coffea canephora HOM05D008224 ORTHO05D010083 1.5e-10 69.7 98 49.0
ATR0481G006 Amborella trichopoda HOM05D008224 ORTHO05D010083 1.3e-09 66.6 91 48.4
ClCG01G020280 Citrullus lanatus HOM05D008224 ORTHO05D010083 1.3e-09 66.6 97 46.4
Sed0025479 Sechium edule HOM05D008224 ORTHO05D010083 1.3e-09 66.6 76 59.2
Actinidia17446 Actinidia chinensis HOM05D008224 ORTHO05D010083 1.7e-09 66.2 93 49.5
A06p26690 Brassica napus HOM05D014245 ORTHO05D010083 1.7e-09 66.2 86 47.7
BcaB02g10776 Brassica carinata HOM05D014245 ORTHO05D010083 3.8e-09 65.1 83 45.8
ECA246G4291 Erigeron canadensis HOM05D008224 ORTHO05D010083 3.8e-09 65.1 121 40.5
DCAR_016610 Daucus carota HOM05D008224 ORTHO05D010083 4.9e-09 64.7 80 51.2
Gohir.A02G170400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.1e-08 63.5 71 52.1
Gohir.D03G009600 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.4e-08 63.2 71 52.1
Actinidia22982 Actinidia chinensis HOM05D002668 ORTHO05D003295 1.9e-08 62.8 68 52.9
Sc16g0002160 Simmondsia chinensis HOM05D008224 ORTHO05D010083 2.5e-08 62.4 105 40.0
Lsat_1_v5_gn_3_74461 Lactuca sativa HOM05D008224 ORTHO05D010083 1.2e-07 60.1 104 42.3
Rhsim10G0212800 Rhododendron simsii HOM05D008224 ORTHO05D010083 1.3e-06 56.6 87 40.2
EL10Ac6g15476 Beta vulgaris HOM05D008224 ORTHO05D010083 3.9e-06 55.1 90 42.2
Sed0001082 Sechium edule HOM05D008224 ORTHO05D010083 5.1e-06 54.7 95 43.2


User provided reference genes

Program Settings