Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 6.6e-159 564.7 467 100.0
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 1.8e-127 460.3 469 87.8
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 7.2e-121 438.3 472 85.2
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 5.1e-119 432.2 469 84.6
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 8.8e-119 431.4 469 82.5
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 4.8e-117 425.6 476 81.1
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 9.1e-116 421.4 404 79.5
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 1.2e-115 421.0 393 83.7
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.0e-115 420.2 403 80.6
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-113 414.5 403 80.4
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 1.9e-113 413.7 401 78.3
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 2.5e-113 413.3 405 79.8
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 4.2e-113 412.5 409 79.2
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 7.2e-113 411.8 414 75.1
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 7.2e-113 411.8 417 76.5
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 1.4e-111 407.5 386 80.6
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 6.7e-111 405.2 404 83.2
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 8.8e-111 404.8 387 78.6
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 5.7e-110 402.1 409 78.5
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 2.8e-109 399.8 408 72.8
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 8.2e-109 398.3 410 74.6
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 2.4e-108 396.7 421 77.4
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 9.1e-108 394.8 385 84.2
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 2.6e-107 393.3 365 80.8
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 7.7e-107 391.7 406 70.0
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 1.0e-106 391.3 412 73.5
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.3e-106 391.0 403 69.7
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.9e-106 389.8 411 80.5
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 2.5e-105 386.7 409 77.0
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 1.0e-103 381.3 398 74.6
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.0e-102 377.1 405 74.1
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 7.5e-102 375.2 409 75.6
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 1.7e-101 374.0 408 71.3
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 1.7e-101 374.0 415 73.3
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 4.8e-101 372.5 411 75.9
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 6.3e-101 372.1 413 72.9
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 1.8e-100 370.5 403 74.9
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 1.2e-99 367.9 407 73.7
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 5.9e-99 365.5 405 72.8
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.7e-99 365.2 411 68.6
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 1.7e-98 364.0 429 69.5
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 5.0e-98 362.5 416 60.6
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 6.5e-98 362.1 415 73.7
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.9e-97 360.5 411 72.5
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 2.5e-97 360.1 379 76.3
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 7.2e-97 358.6 414 71.7
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 1.6e-96 357.5 411 60.8
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 2.7e-96 356.7 405 69.4
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.1e-96 355.5 246 80.9
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 6.1e-96 355.5 246 80.9
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.8e-95 354.0 413 70.9
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 8.8e-95 351.7 411 76.2
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 7.5e-94 348.6 414 67.9
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 6.3e-93 345.5 415 68.2
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 4.1e-92 342.8 397 71.8
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 9.1e-92 341.7 208 91.8
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.2e-91 341.3 405 67.9
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 3.5e-91 339.7 418 61.0
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 5.9e-91 339.0 388 69.1
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.3e-90 337.8 411 72.5
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 2.3e-90 337.0 419 67.8
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.9e-89 334.0 413 66.1
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 3.3e-89 333.2 405 69.1
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 4.2e-89 332.8 409 69.7
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.2e-88 331.3 416 66.6
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 1.6e-88 330.9 408 67.6
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 1.6e-88 330.9 453 57.8
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 6.1e-88 328.9 409 67.5
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 6.1e-88 328.9 410 73.4
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 6.1e-88 328.9 409 66.0
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 4.0e-87 326.2 415 68.9
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 7.5e-86 322.0 421 67.9
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 3.5e-83 313.2 443 62.5
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.9e-81 307.4 431 67.1
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 3.3e-81 306.6 410 64.1
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 5.6e-81 305.8 404 72.5
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 2.0e-78 297.4 252 71.0
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 2.0e-78 297.4 423 52.7
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 4.4e-78 296.2 356 67.4
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 1.9e-76 290.8 390 65.1
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 6.0e-75 285.8 211 77.7
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 8.6e-74 282.0 258 63.2
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 4.0e-71 273.1 159 84.3
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 6.8e-71 272.3 159 84.3
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 6.8e-71 272.3 210 73.3
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.3e-69 268.1 230 70.4
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 4.1e-68 263.1 248 64.5
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 9.2e-68 261.9 159 79.9
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 3.5e-67 260.0 147 87.1
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 6.2e-64 249.2 159 78.0
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 8.9e-63 245.4 159 76.1
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 1.5e-62 244.6 217 69.1
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 5.8e-62 242.7 159 74.8
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 5.8e-62 242.7 159 74.8
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 5.8e-62 242.7 159 74.8
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 5.8e-62 242.7 159 74.8
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 7.6e-62 242.3 216 69.0
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 7.6e-62 242.3 267 59.9
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 2.9e-61 240.4 159 74.2
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 8.6e-58 228.8 366 66.9
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 2.1e-56 224.2 254 55.9
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 3.1e-55 220.3 159 70.4
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 7.6e-54 215.7 159 68.6
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 6.9e-47 192.6 158 62.7
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 6.9e-47 192.6 158 62.7
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.9e-44 184.5 160 61.2
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.9e-44 184.5 160 61.2
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 7.4e-41 172.6 152 61.2
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 6.2e-32 142.9 161 51.6
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 7.9e-27 125.9 161 47.2
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.5e-25 121.7 160 45.0
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 1.7e-21 108.2 157 44.6
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.9e-17 94.7 139 42.4
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 7.7e-14 82.8 56 73.2
Nitab4.5_0001038g0160 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.2e-11 75.5 91 72.5
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.1e-11 74.7 95 48.4
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 1.8e-10 71.6 110 38.2
Actinidia02775 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.8e-08 64.3 95 45.3
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 6.3e-08 63.2 241 53.1
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 2.4e-07 61.2 82 45.1
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 1.2e-06 58.9 101 36.6


User provided reference genes

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