Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 6.8e-93 344.0 171 100.0
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 5.4e-58 228.0 172 72.1
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 1.2e-57 226.9 173 71.1
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 3.5e-57 225.3 176 66.5
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.3e-56 223.4 173 69.4
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.1e-55 220.3 173 68.2
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.4e-53 213.4 173 68.2
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 4.0e-53 211.8 173 63.6
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.1e-50 203.8 172 63.4
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 1.2e-49 200.3 174 62.1
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 5.1e-48 194.9 174 61.5
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 1.1e-47 193.7 172 59.3
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 1.1e-47 193.7 170 61.2
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 7.3e-47 191.0 174 59.2
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 2.8e-46 189.1 165 60.6
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 4.7e-46 188.3 172 59.3
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 8.1e-46 187.6 172 56.4
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.2e-44 183.7 176 58.5
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 4.4e-44 181.8 174 55.2
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.6e-44 181.0 172 58.1
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 9.9e-44 180.6 142 68.3
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.3e-43 180.3 172 58.1
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.3e-43 180.3 172 57.6
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.2e-43 179.5 174 59.2
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.1e-42 177.2 177 58.2
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 1.2e-41 173.7 177 51.4
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 6.0e-41 171.4 175 51.4
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.7e-40 169.9 168 56.5
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 5.1e-40 168.3 176 50.0
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 1.9e-39 166.4 172 55.2
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 3.6e-38 162.2 162 54.9
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 1.4e-37 160.2 164 53.0
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.4e-37 159.5 180 50.0
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.4e-37 159.5 179 50.3
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 4.0e-37 158.7 159 56.0
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 4.4e-36 155.2 173 50.9
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 2.2e-35 152.9 172 50.0
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 8.4e-35 151.0 172 50.0
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.1e-34 150.6 129 61.2
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 5.4e-34 148.3 179 52.0
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 9.3e-34 147.5 171 51.5
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 9.3e-34 147.5 201 47.3
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 2.1e-33 146.4 174 50.0
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 2.7e-33 146.0 171 50.3
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 4.6e-33 145.2 174 48.9
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 5.1e-32 141.7 174 48.9
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 1.1e-31 140.6 169 49.7
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 1.5e-31 140.2 138 56.5
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 4.8e-30 135.2 163 46.0
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 1.8e-29 133.3 120 56.7
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 2.0e-28 129.8 166 47.6
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 2.0e-28 129.8 161 45.3
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.6e-28 129.4 171 43.9
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 2.6e-28 129.4 166 45.8
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 2.9e-27 125.9 124 54.0
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.4e-26 123.6 161 44.1
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 1.9e-26 123.2 161 44.7
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 3.2e-26 122.5 161 45.3
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 5.4e-26 121.7 160 44.4
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.2e-25 120.6 105 64.8
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.5e-25 119.0 148 44.6
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 4.6e-25 118.6 159 43.4
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 4.6e-25 118.6 162 43.8
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 1.0e-24 117.5 149 48.3
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 8.7e-24 114.4 122 50.0
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 1.6e-22 110.2 145 46.2
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.8e-22 109.4 136 50.0
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 8.1e-22 107.8 145 45.5
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 8.1e-22 107.8 176 42.0
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 8.1e-22 107.8 121 49.6
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 1.1e-21 107.5 145 46.2
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.7e-19 100.1 135 46.7
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 4.9e-19 98.6 170 41.2
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 1.4e-18 97.1 120 46.7
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 3.2e-18 95.9 80 53.8
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 4.2e-18 95.5 135 44.4
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 1.6e-17 93.6 143 42.7
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 1.3e-16 90.5 107 45.8
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 2.5e-15 86.3 125 40.0
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 2.1e-14 83.2 91 51.6
Medtr8g078730 Medicago truncatula HOM05D007898 ORTHO05D010010 3.3e-07 59.3 144 34.0


User provided reference genes

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