Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 1.6e-56 223.0 162 100.0
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 2.0e-41 172.9 163 85.3
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 2.7e-35 152.5 163 79.1
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 2.6e-30 136.0 157 75.8
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.2e-27 127.1 157 71.3
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.7e-27 125.9 157 73.2
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 8.0e-27 124.4 157 70.1
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.3e-26 122.9 163 68.1
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 7.5e-25 117.9 139 71.9
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.2e-24 116.3 139 71.9
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 3.5e-22 109.0 156 64.7
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 3.8e-21 105.5 156 60.3
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 1.5e-20 103.6 131 70.2
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 2.5e-20 102.8 153 63.4
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 4.2e-20 102.1 163 67.5
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 5.5e-20 101.7 150 66.7
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 7.2e-20 101.3 142 61.3
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 4.7e-19 98.6 157 63.1
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 6.1e-19 98.2 147 66.7
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 2.3e-18 96.3 154 64.3
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 5.2e-18 95.1 152 63.8
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 6.8e-18 94.7 128 68.8
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 2.6e-17 92.8 156 67.3
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 5.7e-17 91.7 147 66.0
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 2.8e-16 89.4 154 63.6
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 2.8e-16 89.4 154 63.6
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 2.8e-16 89.4 124 67.7
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 3.7e-16 89.0 104 78.8
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 4.8e-16 88.6 151 64.9
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 6.3e-16 88.2 163 61.3
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 8.3e-16 87.8 155 62.6
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 8.3e-16 87.8 143 65.7
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 1.1e-15 87.4 149 56.4
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.1e-15 87.4 154 54.5
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 1.1e-15 87.4 161 60.2
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 1.1e-15 87.4 161 61.5
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 1.1e-15 87.4 124 65.3
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 2.4e-15 86.3 153 60.8
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 4.1e-15 85.5 154 63.0
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 7.0e-15 84.7 121 61.2
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 9.1e-15 84.3 141 61.7
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 2.0e-14 83.2 146 65.1
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 4.5e-14 82.0 138 60.1
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 4.5e-14 82.0 151 56.3
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 5.9e-14 81.6 139 66.9
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 5.9e-14 81.6 154 53.9
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 1.3e-13 80.5 166 62.0
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.7e-13 80.1 160 61.2
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.7e-13 80.1 139 64.7
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.2e-13 79.7 155 60.0
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 2.2e-13 79.7 155 63.9
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 2.9e-13 79.3 161 58.4
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 2.9e-13 79.3 132 65.2
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 3.8e-13 79.0 147 61.9
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 3.8e-13 79.0 150 57.3
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 3.8e-13 79.0 150 57.3
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 5.0e-13 78.6 160 60.6
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 5.0e-13 78.6 158 60.1
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 6.5e-13 78.2 143 62.2
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 6.5e-13 78.2 143 62.2
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 1.1e-12 77.4 202 51.5
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 1.1e-12 77.4 163 55.2
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 1.9e-12 76.6 144 62.5
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 1.9e-12 76.6 147 49.0
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 1.9e-12 76.6 160 59.4
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.9e-12 76.6 150 54.0
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 2.5e-12 76.3 144 61.8
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 2.5e-12 76.3 153 60.8
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 3.2e-12 75.9 144 59.7
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 3.2e-12 75.9 162 59.3
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 3.2e-12 75.9 144 61.8
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 3.2e-12 75.9 162 49.4
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 4.2e-12 75.5 150 47.3
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 5.5e-12 75.1 152 55.9
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 5.5e-12 75.1 123 59.3
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 7.2e-12 74.7 165 55.8
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 9.5e-12 74.3 148 59.5
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 1.6e-11 73.6 143 62.2
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 1.6e-11 73.6 144 61.8
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 1.6e-11 73.6 144 61.8
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 2.7e-11 72.8 153 56.2
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 3.6e-11 72.4 128 50.8
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 4.7e-11 72.0 144 61.1
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 6.1e-11 71.6 146 62.3
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 1.0e-10 70.9 157 38.9
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 1.4e-10 70.5 103 68.0
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 1.8e-10 70.1 126 63.5
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 1.8e-10 70.1 137 57.7
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 1.8e-10 70.1 126 59.5
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 2.3e-10 69.7 142 62.0
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 3.0e-10 69.3 122 63.9
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 3.0e-10 69.3 169 53.8
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 4.0e-10 68.9 149 56.4
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 2.8e-08 62.8 156 50.6
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 1.8e-07 60.1 167 48.5
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 1.6e-06 57.0 101 56.4
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 2.0e-06 56.6 160 42.5
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 4.5e-06 55.5 166 51.8


User provided reference genes

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