Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G144900 Prunus persica HOM05D008334 ORTHO05D010366 3.6e-49 198.0 104 100.0
Prupe.7G144800 Prunus persica HOM05D008334 ORTHO05D010366 4.2e-45 184.5 104 93.3
FAN28G2207 Fragaria x ananassa HOM05D008334 ORTHO05D010366 6.7e-19 97.4 113 55.8
RcHm_v2.0_Chr2g0103311 Rosa chinensis HOM05D008334 ORTHO05D010366 1.9e-18 95.9 111 56.8
FAN23G2256 Fragaria x ananassa HOM05D008334 ORTHO05D010366 5.7e-18 94.4 113 54.9
FAN19G2894 Fragaria x ananassa HOM05D008334 ORTHO05D010366 9.7e-18 93.6 114 53.5
FvH4_1g14560 Fragaria vesca HOM05D008334 ORTHO05D010366 1.6e-17 92.8 114 53.5
CiPaw.01G028200 Carya illinoinensis HOM05D008334 ORTHO05D010366 1.1e-13 80.1 109 48.6
Sabra05G0106400 Salix brachista HOM05D008334 ORTHO05D010366 2.1e-12 75.9 108 47.2
Potri.005G131000 Populus trichocarpa HOM05D008334 ORTHO05D010366 6.1e-12 74.3 108 46.3
Medtr5g018540 Medicago truncatula HOM05D008334 ORTHO05D010366 1.4e-11 73.2 108 41.7
Haze_15171 Corylus avellana HOM05D008334 ORTHO05D010366 5.1e-11 71.2 109 44.0
Manes.13G131800 Manihot esculenta HOM05D008334 ORTHO05D010366 8.8e-11 70.5 111 40.5
Peaxi162Scf00535g00717 Petunia axillaris HOM05D008334 ORTHO05D010366 8.8e-11 70.5 108 40.7
TPR.G29861 Trifolium pratense HOM05D008334 ORTHO05D010366 1.1e-10 70.1 110 41.8
Cfa004229 Carpinus fangiana HOM05D008334 ORTHO05D010366 2.0e-10 69.3 108 45.4
SGA_v2.0_scaffold15G07210 Striga asiatica HOM05D008334 ORTHO05D010366 3.3e-10 68.6 107 48.6
MELO3C007512.2 Cucumis melo HOM05D037312 ORTHO05D010366 4.3e-10 68.2 105 46.7
CsaV3_6G042740 Cucumis sativus L. HOM05D037312 ORTHO05D010366 5.7e-10 67.8 108 39.8
Glyma.11G060500 Glycine max HOM05D008334 ORTHO05D010366 7.4e-10 67.4 105 41.9
QL06p044185 Quercus lobata HOM05D008334 ORTHO05D010366 9.7e-10 67.0 107 41.1
Nitab4.5_0001014g0160 Nicotiana tabacum HOM05D008334 ORTHO05D010366 1.7e-09 66.2 108 40.7
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 2.2e-09 65.9 97 42.3
Cpa.g.sc15.75 Carica papaya HOM05D008334 ORTHO05D010366 2.8e-09 65.5 102 41.2
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 3.7e-09 65.1 84 42.9
Manes.12G094900 Manihot esculenta HOM05D008334 ORTHO05D010366 3.7e-09 65.1 107 37.4
DCAR_010943 Daucus carota HOM05D008334 ORTHO05D010366 8.2e-09 63.9 116 39.7
Ciclev10026829m.g Citrus clementina HOM05D008334 ORTHO05D010366 1.4e-08 63.2 115 42.6
Lj2g0004238 Lotus japonicus HOM05D008334 ORTHO05D010366 2.4e-08 62.4 86 40.7
Atru.chr3.467 Acer truncatum HOM05D008334 ORTHO05D010366 5.3e-08 61.2 116 40.5
ClCG01G016430 Citrullus lanatus HOM05D037312 ORTHO05D010366 5.3e-08 61.2 106 43.4
Duzib147G0108 Durio zibethinus HOM05D008334 ORTHO05D010366 5.3e-08 61.2 112 39.3
Potri.007G034700 Populus trichocarpa HOM05D008334 ORTHO05D010366 6.9e-08 60.8 108 38.9
Rhsim08G0109000 Rhododendron simsii HOM05D008334 ORTHO05D010366 9.1e-08 60.5 103 36.9
Dinv39913 Davidia involucrata HOM05D008334 ORTHO05D010366 1.2e-07 60.1 83 49.4
VMungo0251G2655 Vigna mungo HOM05D008334 ORTHO05D010366 1.2e-07 60.1 110 40.0
Atru.chr3.465 Acer truncatum HOM05D008334 ORTHO05D010366 2.0e-07 59.3 112 39.3
Thecc.01G046100 Theobroma cacao HOM05D008334 ORTHO05D010366 2.0e-07 59.3 107 35.5
COL.COLO4_22186 Corchorus olitorius HOM05D008334 ORTHO05D010366 2.6e-07 58.9 116 41.4
Eucgr.I01021 Eucalyptus grandis HOM05D008334 ORTHO05D010366 2.6e-07 58.9 112 38.4
Oeu032927.1 Olea europaea HOM05D008334 ORTHO05D010366 5.9e-07 57.8 105 37.1
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 7.7e-07 57.4 112 33.9
Glyma.01G182200 Glycine max HOM05D008334 ORTHO05D010366 1.3e-06 56.6 73 42.5
Phvul.002G023200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 1.7e-06 56.2 106 36.8
Migut.H00500 Erythranthe guttata HOM05D008334 ORTHO05D010366 2.2e-06 55.8 111 38.7
Psat0s4220g0080 Pisum sativum HOM05D008334 ORTHO05D010366 2.2e-06 55.8 111 37.8
PGSC0003DMG400010112 Solanum tuberosum HOM05D008334 ORTHO05D010366 3.8e-06 55.1 94 38.3
TAR628G0004 Trochodendron aralioides HOM05D008210 ORTHO05D010078 5.0e-06 54.7 67 46.3
Nitab4.5_0000108g0210 Nicotiana tabacum HOM05D008334 ORTHO05D010366 8.5e-06 53.9 84 42.9


User provided reference genes

Program Settings