Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 4.1e-46 187.6 87 100.0
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 1.6e-26 122.5 65 80.0
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 2.1e-26 122.1 65 83.1
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 2.1e-26 122.1 65 83.1
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 6.2e-26 120.6 65 78.5
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 1.1e-25 119.8 67 79.1
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.1e-25 119.8 67 79.1
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.1e-25 119.8 67 79.1
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.1e-25 119.8 67 79.1
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.1e-25 119.8 67 79.1
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 2.3e-25 118.6 67 79.1
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 3.1e-25 118.2 65 78.5
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 5.2e-25 117.5 65 75.4
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 8.9e-25 116.7 65 78.5
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 1.2e-24 116.3 65 78.5
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.2e-24 116.3 65 75.4
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.5e-24 115.9 65 76.9
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 2.0e-24 115.5 65 76.9
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.0e-24 115.5 65 78.5
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 2.0e-24 115.5 65 78.5
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 2.0e-24 115.5 65 78.5
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 2.6e-24 115.2 65 76.9
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 3.4e-24 114.8 65 75.4
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 4.4e-24 114.4 65 75.4
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 4.4e-24 114.4 65 73.8
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 5.8e-24 114.0 65 76.9
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 7.5e-24 113.6 65 76.9
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 9.9e-24 113.2 65 76.9
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 9.9e-24 113.2 65 76.9
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 9.9e-24 113.2 65 75.4
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 9.9e-24 113.2 65 76.9
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.3e-23 112.8 65 72.3
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 1.3e-23 112.8 65 76.9
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.3e-23 112.8 65 75.4
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.7e-23 112.5 65 73.8
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.7e-23 112.5 65 73.8
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 1.7e-23 112.5 65 73.8
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 2.2e-23 112.1 65 73.8
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 2.9e-23 111.7 65 75.4
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 3.7e-23 111.3 65 75.4
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.7e-23 111.3 65 72.3
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 3.7e-23 111.3 65 72.3
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 4.9e-23 110.9 65 72.3
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 6.4e-23 110.5 65 72.3
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 8.3e-23 110.2 65 73.8
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 1.1e-22 109.8 65 73.8
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 1.1e-22 109.8 65 73.8
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 1.9e-22 109.0 65 73.8
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 3.2e-22 108.2 65 72.3
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 5.4e-22 107.5 66 72.7
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 7.1e-22 107.1 65 70.8
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 9.2e-22 106.7 65 70.8
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 1.6e-21 105.9 65 72.3
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 1.6e-21 105.9 72 69.4
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 1.6e-21 105.9 65 73.8
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 1.6e-21 105.9 65 70.8
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 3.5e-21 104.8 77 63.6
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 7.8e-21 103.6 79 62.0
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 1.3e-20 102.8 63 71.4
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.3e-20 102.8 80 61.2
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.3e-20 102.8 63 71.4
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 2.3e-20 102.1 63 69.8
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 2.3e-20 102.1 65 69.2
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 5.1e-20 100.9 70 67.1
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 8.6e-20 100.1 70 68.6
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 8.6e-20 100.1 63 69.8
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 1.1e-19 99.8 65 69.2
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 3.3e-19 98.2 68 69.1
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 4.3e-19 97.8 63 69.8
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 7.3e-19 97.1 68 64.7
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 7.3e-19 97.1 65 69.2
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 9.5e-19 96.7 63 68.3
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 9.5e-19 96.7 63 68.3
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 9.5e-19 96.7 63 68.3
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 9.5e-19 96.7 63 68.3
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 9.5e-19 96.7 63 68.3
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 9.5e-19 96.7 63 68.3
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 68.3
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 1.2e-18 96.3 63 69.8
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 3.6e-18 94.7 63 66.7
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 3.6e-18 94.7 63 66.7
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 1.4e-17 92.8 66 65.2
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 9.9e-16 86.7 79 53.2
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 2.2e-15 85.5 74 58.1
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 2.9e-15 85.1 65 61.5
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 3.8e-15 84.7 64 60.9
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 3.5e-13 78.2 82 48.8
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 1.0e-12 76.6 63 58.7
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 6.6e-12 73.9 64 56.2
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 5.6e-11 70.9 45 64.4
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 9.6e-11 70.1 36 77.8
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 1.1e-09 66.6 34 76.5
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 1.4e-09 66.2 34 76.5
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 1.8e-09 65.9 34 76.5
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 2.4e-09 65.5 34 76.5
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 2.4e-09 65.5 64 46.9
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 1.5e-08 62.8 36 66.7
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 3.4e-08 61.6 34 67.6
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 3.4e-08 61.6 36 66.7
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 1.1e-06 56.6 34 70.6
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 1.1e-06 56.6 36 66.7
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 1.9e-06 55.8 37 64.9
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 7.1e-06 53.9 34 61.8


User provided reference genes

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