Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G128300 Prunus persica HOM05D004402 ORTHO05D005314 1.3e-301 1038.9 512 100.0
FvH4_6g16530 Fragaria vesca HOM05D004402 ORTHO05D005314 1.8e-258 895.6 512 86.1
RcHm_v2.0_Chr3g0470441 Rosa chinensis HOM05D004402 ORTHO05D005314 1.7e-256 889.0 512 86.3
MD12G1109700 Malus domestica HOM05D004402 ORTHO05D005314 2.4e-250 868.6 479 89.4
MD04G1091700 Malus domestica HOM05D004402 ORTHO05D005314 1.0e-245 853.2 474 87.6
FAN09G4748 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.6e-241 838.6 512 82.2
Cfa017631 Carpinus fangiana HOM05D004402 ORTHO05D005314 4.5e-241 837.8 509 80.6
FAN14G0478 Fragaria x ananassa HOM05D004402 ORTHO05D005314 5.8e-241 837.4 512 82.0
Dinv35795 Davidia involucrata HOM05D004402 ORTHO05D005314 6.4e-240 833.9 513 80.3
Duzib093G2129 Durio zibethinus HOM05D004402 ORTHO05D005314 6.4e-240 833.9 509 80.9
Ciclev10011527m.g Citrus clementina HOM05D004402 ORTHO05D005314 1.8e-237 825.9 508 79.9
CiPaw.10G128900 Carya illinoinensis HOM05D004402 ORTHO05D005314 8.7e-237 823.5 509 80.0
GSVIVG01033653001 Vitis vinifera HOM05D004402 ORTHO05D005314 7.4e-236 820.5 514 78.6
Atru.chr8.1786 Acer truncatum HOM05D004402 ORTHO05D005314 1.6e-235 819.3 507 78.5
Thecc.05G068900 Theobroma cacao HOM05D004402 ORTHO05D005314 3.7e-235 818.1 509 79.2
QL07p043056 Quercus lobata HOM05D004402 ORTHO05D005314 6.2e-235 817.4 509 79.0
CANSAT80G1177 Cannabis sativa HOM05D004402 ORTHO05D005314 5.3e-234 814.3 512 77.5
CSS0044786 Camellia sinensis var. sinensis HOM05D004402 ORTHO05D005314 3.4e-233 811.6 513 78.4
Gorai.009G414300 Gossypium raimondii HOM05D004402 ORTHO05D005314 5.8e-233 810.8 509 77.8
Sabra06G0097300 Salix brachista HOM05D004402 ORTHO05D005314 1.0e-232 810.1 509 79.6
COL.COLO4_09330 Corchorus olitorius HOM05D004402 ORTHO05D005314 6.5e-232 807.4 507 79.7
Glyma.19G184800 Glycine max HOM05D004402 ORTHO05D005314 1.1e-231 806.6 509 77.0
Lj1g0000599 Lotus japonicus HOM05D004402 ORTHO05D005314 1.4e-231 806.2 509 76.6
Potri.006G123000 Populus trichocarpa HOM05D004402 ORTHO05D005314 4.2e-231 804.7 509 79.4
Gohir.D04G110200 Gossypium hirsutum HOM05D004402 ORTHO05D005314 9.3e-231 803.5 509 77.2
Lalb_Chr20g0112571 Lupinus albus HOM05D004402 ORTHO05D005314 2.3e-229 798.9 509 76.8
Phvul.001G179700 Phaseolus vulgaris HOM05D004402 ORTHO05D005314 2.3e-229 798.9 509 75.8
TAR633G1938 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.1e-228 796.6 513 77.2
Glyma.03G184200 Glycine max HOM05D004402 ORTHO05D005314 1.9e-228 795.8 507 75.9
FAN05G1679 Fragaria x ananassa HOM05D004402 ORTHO05D005314 7.4e-228 793.9 512 78.9
FAN05G2520 Fragaria x ananassa HOM05D004402 ORTHO05D005314 9.6e-228 793.5 512 78.9
Ca_08910_v3 Cicer arietinum L. HOM05D004402 ORTHO05D005314 2.4e-226 788.9 508 76.2
Lalb_Chr25g0288951 Lupinus albus HOM05D004402 ORTHO05D005314 3.1e-226 788.5 508 75.6
Nn6g35264 Nelumbo nucifera HOM05D004402 ORTHO05D005314 3.1e-226 788.5 513 76.8
FAN02G2572 Fragaria x ananassa HOM05D004402 ORTHO05D005314 4.1e-226 788.1 538 76.4
THA.LOC104823232 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 3.4e-225 785.0 508 77.2
CsaV3_3G036050 Cucumis sativus L. HOM05D004402 ORTHO05D005314 2.2e-224 782.3 509 73.5
Sc20g0005590 Simmondsia chinensis HOM05D004402 ORTHO05D005314 2.2e-224 782.3 513 73.5
ClCG10G020050 Citrullus lanatus HOM05D004402 ORTHO05D005314 2.9e-224 781.9 509 74.1
TAR636G0918 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.9e-224 781.9 490 78.2
PGR004G2373 Punica granatum HOM05D004402 ORTHO05D005314 1.4e-223 779.6 512 76.0
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea HOM05D004402 ORTHO05D005314 1.9e-223 779.2 547 70.9
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea HOM05D004402 ORTHO05D005314 2.5e-223 778.9 547 70.7
Nitab4.5_0000578g0080 Nicotiana tabacum HOM05D004402 ORTHO05D005314 5.5e-223 777.7 512 74.4
vmacro01673 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 5.5e-223 777.7 547 71.8
Medtr7g102180 Medicago truncatula HOM05D004402 ORTHO05D005314 2.1e-222 775.8 508 75.2
Oeu041487.1 Olea europaea HOM05D004402 ORTHO05D005314 6.1e-222 774.2 513 75.2
Manes.12G084800 Manihot esculenta HOM05D004402 ORTHO05D005314 2.3e-221 772.3 510 75.5
COL.COLO4_26944 Corchorus olitorius HOM05D004402 ORTHO05D005314 3.0e-221 771.9 477 79.5
TWI74G0242 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 3.0e-221 771.9 509 76.2
Cc06_g04350 Coffea canephora HOM05D004402 ORTHO05D005314 6.7e-221 770.8 513 73.7
Sed0020729 Sechium edule HOM05D004402 ORTHO05D005314 8.7e-221 770.4 509 73.5
Peaxi162Scf00311g01314 Petunia axillaris HOM05D004402 ORTHO05D005314 1.9e-220 769.2 511 74.8
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 4.3e-220 768.1 507 75.1
Sopen09g003130 Solanum pennellii HOM05D004402 ORTHO05D005314 4.3e-220 768.1 512 73.6
Sopen10g033410 Solanum pennellii HOM05D004402 ORTHO05D005314 4.3e-220 768.1 511 74.4
CAN.G488.15 Capsicum annuum HOM05D004402 ORTHO05D005314 6.3e-219 764.2 511 74.2
BolC2t06097H Brassica oleracea HOM05D004402 ORTHO05D005314 8.2e-219 763.8 509 74.5
Solyc09g008310.3 Solanum lycopersicum HOM05D004402 ORTHO05D005314 1.4e-218 763.1 512 73.0
PSO801G0054 Papaver somniferum HOM05D004402 ORTHO05D005314 4.1e-218 761.5 513 72.9
Lj2C120T4 Lonicera japonica HOM05D004402 ORTHO05D005314 6.9e-218 760.8 515 74.6
BcaB01g05839 Brassica carinata HOM05D004402 ORTHO05D005314 1.5e-217 759.6 508 75.2
C02p01070 Brassica napus HOM05D004402 ORTHO05D005314 1.5e-217 759.6 509 74.1
BraA10t45293Z Brassica rapa HOM05D004402 ORTHO05D005314 1.5e-217 759.6 508 74.4
BolC3t12705H Brassica oleracea HOM05D004402 ORTHO05D005314 4.5e-217 758.1 508 75.2
A10p32580 Brassica napus HOM05D004402 ORTHO05D005314 7.7e-217 757.3 508 74.0
THA.LOC104826918 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 7.7e-217 757.3 500 75.8
C09p73380 Brassica napus HOM05D004402 ORTHO05D005314 2.2e-216 755.7 509 74.3
Thhalv10013303m.g Eutrema salsugineum HOM05D004402 ORTHO05D005314 2.9e-216 755.4 516 73.4
PSO339G5499 Papaver somniferum HOM05D004402 ORTHO05D005314 3.8e-216 755.0 514 72.6
TWI77G0706 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 3.8e-216 755.0 508 73.4
BcaB01g05821 Brassica carinata HOM05D004402 ORTHO05D005314 6.5e-216 754.2 508 74.0
BcaC06g32061 Brassica carinata HOM05D004402 ORTHO05D005314 8.5e-216 753.8 509 74.3
C03p01510 Brassica napus HOM05D004402 ORTHO05D005314 8.5e-216 753.8 508 74.8
BolC9t60074H Brassica oleracea HOM05D004402 ORTHO05D005314 8.5e-216 753.8 509 74.3
BraA02t04760Z Brassica rapa HOM05D004402 ORTHO05D005314 2.5e-215 752.3 511 73.4
AT5G03430 Arabidopsis thaliana HOM05D004402 ORTHO05D005314 9.4e-215 750.4 508 73.8
HanXRQChr14g0454821 Helianthus annuus HOM05D004402 ORTHO05D005314 9.4e-215 750.4 507 73.2
Sp6g39310 Schrenkiella parvula HOM05D004402 ORTHO05D005314 1.6e-214 749.6 508 73.8
vmacro07301 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 2.1e-214 749.2 600 65.7
MSTRG.10328 Avicennia marina HOM05D004402 ORTHO05D005314 2.7e-214 748.8 512 73.0
BcaC06g32058 Brassica carinata HOM05D004402 ORTHO05D005314 2.7e-214 748.8 508 73.2
AL6G12780 Arabidopsis lyrata HOM05D004402 ORTHO05D005314 4.6e-214 748.0 508 73.8
Eucgr.K02925 Eucalyptus grandis HOM05D004402 ORTHO05D005314 4.6e-214 748.0 509 72.5
Carub.0006s0224 Capsella rubella HOM05D004402 ORTHO05D005314 7.9e-214 747.3 508 73.6
CARHR209910 Cardamine hirsuta HOM05D004402 ORTHO05D005314 1.0e-213 746.9 508 73.6
A03p01170 Brassica napus HOM05D004402 ORTHO05D005314 2.3e-213 745.7 508 73.6
DCAR_015004 Daucus carota HOM05D004402 ORTHO05D005314 1.7e-211 739.6 520 71.9
MBI17_g34762_MAGBIO Magnolia biondii HOM05D004402 ORTHO05D005314 4.8e-211 738.0 530 69.6
Solyc10g083960.2 Solanum lycopersicum HOM05D004402 ORTHO05D005314 4.8e-211 738.0 511 72.4
Nn2g13812 Nelumbo nucifera HOM05D004402 ORTHO05D005314 1.4e-210 736.5 514 72.8
Migut.L01711 Erythranthe guttata HOM05D004402 ORTHO05D005314 1.8e-210 736.1 508 72.8
SalBow2G1223 Salvia bowleyana HOM05D004402 ORTHO05D005314 6.9e-210 734.2 501 72.9
SalBow3G3127 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.5e-209 733.0 501 72.9
DCAR_017670 Daucus carota HOM05D004402 ORTHO05D005314 2.0e-209 732.6 508 72.2
Dinv37323 Davidia involucrata HOM05D004402 ORTHO05D005314 4.5e-209 731.5 452 80.3
ATR0910G004 Amborella trichopoda HOM05D004402 ORTHO05D005314 7.7e-209 730.7 518 69.9
MELO3C009365.2 Cucumis melo HOM05D004402 ORTHO05D005314 5.0e-208 728.0 509 70.1
BraA03t09499Z Brassica rapa HOM05D004402 ORTHO05D005314 7.2e-207 724.2 490 74.3
AUR62026916 Chenopodium quinoa HOM05D004402 ORTHO05D005314 7.9e-206 720.7 511 68.7
ECA238G0572 Erigeron canadensis HOM05D004402 ORTHO05D005314 4.4e-204 714.9 507 69.6
VMungo1383G0058 Vigna mungo HOM05D004402 ORTHO05D005314 5.7e-204 714.5 460 75.4
Rhsim03G0090600 Rhododendron simsii HOM05D004402 ORTHO05D005314 3.1e-202 708.8 566 65.7
CDE10G0806 Ceratophyllum demersum HOM05D004402 ORTHO05D005314 1.6e-201 706.4 516 68.4
EL10Ac7g16646 Beta vulgaris HOM05D004402 ORTHO05D005314 2.5e-199 699.1 587 61.5
Peaxi162Scf00722g00015 Petunia axillaris HOM05D004402 ORTHO05D005314 8.0e-198 694.1 512 68.6
HPP92_025807 Vanilla planifolia HOM05D004402 ORTHO05D005314 1.4e-197 693.3 512 67.6
Psat3g041880 Pisum sativum HOM05D004402 ORTHO05D005314 8.8e-197 690.6 450 76.9
Nitab4.5_0000063g0160 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.5e-196 689.9 510 69.6
SGA_v2.0_scaffold75G24834 Striga asiatica HOM05D004402 ORTHO05D005314 1.7e-195 686.4 513 69.4
Zm00001eb333440 Zea mays HOM05D004402 ORTHO05D005314 2.2e-195 686.0 512 66.8
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 1.1e-194 683.7 500 68.6
Lsat_1_v5_gn_1_51600 Lactuca sativa HOM05D004402 ORTHO05D005314 1.4e-194 683.3 503 67.8
ECA248G3038 Erigeron canadensis HOM05D004402 ORTHO05D005314 1.8e-194 682.9 504 67.1
AUR62042064 Chenopodium quinoa HOM05D004402 ORTHO05D005314 2.4e-194 682.6 511 66.3
Oeu005028.1 Olea europaea HOM05D004402 ORTHO05D005314 9.1e-194 680.6 530 66.0
Ah.08g211550 Amaranthus hybridus HOM05D004402 ORTHO05D005314 5.9e-193 677.9 512 66.0
BcaC03g13007 Brassica carinata HOM05D004402 ORTHO05D005314 1.0e-192 677.2 452 74.1
Actinidia28911 Actinidia chinensis HOM05D004402 ORTHO05D005314 2.2e-192 676.0 471 72.6
Nitab4.5_0000814g0100 Nicotiana tabacum HOM05D004402 ORTHO05D005314 3.8e-192 675.2 512 69.1
Nitab4.5_0010955g0010 Nicotiana tabacum HOM05D004402 ORTHO05D005314 3.8e-192 675.2 526 66.0
unitig_60.g25815 Utricularia gibba HOM05D004402 ORTHO05D005314 8.3e-179 630.9 513 64.1
Migut.J00646 Erythranthe guttata HOM05D004402 ORTHO05D005314 1.5e-172 610.1 403 74.2
CAN.G900.21 Capsicum annuum HOM05D004402 ORTHO05D005314 7.5e-172 607.8 402 73.9
Haze_20522 Corylus avellana HOM05D004402 ORTHO05D005314 4.0e-165 585.5 493 63.5
Hund20335 Selenicereus undatus HOM05D004402 ORTHO05D005314 1.6e-161 573.5 663 49.9
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis HOM05D004402 ORTHO05D005314 8.6e-160 567.8 537 55.3
Mapoly0054s0056 Marchantia polymorpha HOM05D004402 ORTHO05D005314 6.8e-157 558.1 550 54.0
SHI12325 Sapria himalayana HOM05D004402 ORTHO05D005314 6.2e-150 535.0 453 61.8
SMO146G0130 Selaginella moellendorffii HOM05D004402 ORTHO05D005314 1.1e-149 534.3 417 64.0
TPR.G32815 Trifolium pratense HOM05D004402 ORTHO05D005314 6.2e-134 481.9 339 71.4
SGA_v2.0_scaffold224G42938 Striga asiatica HOM05D004402 ORTHO05D005314 1.0e-128 464.5 447 56.4
PGSC0003DMG401028184 Solanum tuberosum HOM05D004402 ORTHO05D005314 9.3e-122 441.4 273 77.3
Gohir.A04G071600 Gossypium hirsutum HOM05D004402 ORTHO05D005314 4.6e-121 439.1 271 80.1
Aqoxy3G01670 Aquilegia oxysepala HOM05D004402 ORTHO05D005314 5.7e-111 405.6 279 71.0
SEGI_14784 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 5.3e-93 345.9 243 70.8
Zm00001eb128460 Zea mays HOM05D004402 ORTHO05D005314 7.4e-87 325.5 244 66.4
Gohir.A04G071700 Gossypium hirsutum HOM05D004402 ORTHO05D005314 9.7e-87 325.1 213 74.2
Zm00001eb127890 Zea mays HOM05D004402 ORTHO05D005314 8.0e-81 305.4 261 59.8
HanXRQChr07g0194721 Helianthus annuus HOM05D004402 ORTHO05D005314 5.9e-76 289.3 504 40.1
Hma1.2p1_0828F.1_g225130 Hydrangea macrophylla HOM05D004402 ORTHO05D005314 1.0e-75 288.5 218 68.3
Cre13.g592500 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D005314 4.0e-64 250.0 511 33.5
PRCOL_00001257 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 5.6e-58 229.6 393 36.9
Os01g0259600 Oryza sativa ssp. japonica HOM05D004402 ORTHO05D005314 1.7e-46 191.4 138 68.8
TAR636G0130 Trochodendron aralioides HOM05D004402 ORTHO05D005314 3.9e-43 180.3 121 72.7
TAR636G0069 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.5e-42 178.3 189 51.3
VMungo1383G2351 Vigna mungo HOM05D004402 ORTHO05D005314 2.1e-41 174.5 106 80.2
PRCOL_00006213 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 3.3e-34 150.6 184 42.9
PGSC0003DMG400003892 Solanum tuberosum HOM05D004402 ORTHO05D005314 1.2e-31 142.1 112 61.6
SalBow3G0082 Salvia bowleyana HOM05D004402 ORTHO05D005314 2.4e-29 134.4 245 38.4
SalBow3G2408 Salvia bowleyana HOM05D004402 ORTHO05D005314 7.1e-29 132.9 245 38.0
TPR.G11110 Trifolium pratense HOM05D004402 ORTHO05D005314 1.1e-26 125.6 68 83.8
SalBow3G1023 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.2e-23 115.5 64 85.9
Cfa022272 Carpinus fangiana HOM05D004402 ORTHO05D005314 7.3e-18 96.3 166 30.1
HanXRQChr13g0396631 Helianthus annuus HOM05D004402 ORTHO05D005314 4.9e-14 83.6 73 63.0
CBR_g4033 Chara braunii HOM05D004402 ORTHO05D005314 1.1e-13 82.4 113 46.0
CAN.G900.20 Capsicum annuum HOM05D004402 ORTHO05D005314 4.2e-13 80.5 61 67.2
Cre01.g026650 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D007141 6.0e-12 76.6 240 27.1
Lsat_1_v5_gn_6_17200 Lactuca sativa HOM05D004402 ORTHO05D005314 1.6e-09 68.6 87 44.8
Cfa025539 Carpinus fangiana HOM05D003439 ORTHO05D004062 6.9e-08 63.2 98 32.7
ECA233G2956 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 62.4 105 42.9
TAR636G1582 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.6e-07 61.2 36 77.8
SEGI_37303 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 1.3e-06 58.9 76 43.4
CBR_g4032 Chara braunii HOM05D004402 ORTHO05D043925 2.2e-06 58.2 36 72.2


User provided reference genes

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