Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 5.6e-68 260.8 128 100.0
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 3.9e-61 238.0 128 89.1
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 1.9e-60 235.7 128 89.8
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 6.2e-59 230.7 128 82.8
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 8.4e-56 220.3 129 84.5
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.4e-55 219.5 128 83.6
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.9e-55 219.2 128 80.5
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 5.5e-55 217.6 129 79.1
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 5.5e-55 217.6 128 79.7
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 5.5e-55 217.6 128 79.7
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 7.1e-55 217.2 128 78.9
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 9.3e-55 216.9 128 78.1
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.2e-54 216.5 128 82.8
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.2e-54 216.5 128 82.8
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 2.1e-54 215.7 128 79.7
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 5.1e-53 211.1 128 78.9
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 1.5e-52 209.5 128 79.7
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 5.7e-52 207.6 128 76.6
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 7.4e-52 207.2 133 75.2
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 1.3e-51 206.5 128 75.0
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 2.8e-51 205.3 129 79.1
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 2.8e-51 205.3 128 77.3
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.8e-51 205.3 125 77.6
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 2.8e-51 205.3 129 76.7
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 3.7e-51 204.9 123 76.4
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 1.4e-50 203.0 121 79.3
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 2.4e-50 202.2 130 73.8
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 2.4e-50 202.2 128 75.8
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 3.1e-50 201.8 124 78.2
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 4.1e-50 201.4 131 77.1
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 4.1e-50 201.4 124 77.4
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 5.3e-50 201.1 130 75.4
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 6.9e-50 200.7 128 71.1
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 6.9e-50 200.7 128 75.0
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.5e-49 199.5 122 73.8
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.5e-49 199.5 122 73.8
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.5e-49 199.5 122 73.8
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 2.0e-49 199.1 121 75.2
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 2.0e-49 199.1 145 67.6
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 2.6e-49 198.7 128 71.9
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 2.6e-49 198.7 128 71.9
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 3.4e-49 198.4 122 74.6
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 4.5e-49 198.0 121 74.4
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 1.3e-48 196.4 122 71.3
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 1.3e-48 196.4 121 73.6
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 1.3e-48 196.4 121 72.7
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 1.7e-48 196.1 130 72.3
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 2.9e-48 195.3 121 71.9
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 2.9e-48 195.3 128 73.4
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 3.8e-48 194.9 128 73.4
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 3.8e-48 194.9 122 76.2
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 6.5e-48 194.1 128 70.3
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 6.5e-48 194.1 130 71.5
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 1.1e-47 193.4 128 71.9
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 1.1e-47 193.4 121 74.4
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 1.9e-47 192.6 127 72.4
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 2.5e-47 192.2 128 71.9
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 3.2e-47 191.8 128 74.2
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 4.2e-47 191.4 134 70.9
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 5.5e-47 191.0 124 71.8
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 9.3e-47 190.3 136 70.6
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 9.3e-47 190.3 126 68.3
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 1.2e-46 189.9 122 73.8
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 2.1e-46 189.1 120 72.5
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 2.7e-46 188.7 130 70.8
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 3.5e-46 188.3 130 68.5
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 3.5e-46 188.3 116 76.7
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 6.1e-46 187.6 172 59.9
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 7.9e-46 187.2 128 71.9
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.0e-45 186.8 128 71.9
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 1.3e-45 186.4 126 69.0
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 1.3e-45 186.4 130 68.5
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 1.3e-45 186.4 128 68.0
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 2.3e-45 185.7 125 69.6
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.3e-45 185.7 126 72.2
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 3.0e-45 185.3 122 73.8
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 5.1e-45 184.5 129 69.8
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 8.7e-45 183.7 128 70.3
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 1.1e-44 183.3 124 66.1
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 3.3e-44 181.8 144 64.6
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 4.3e-44 181.4 129 66.7
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 1.3e-43 179.9 105 80.0
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 3.7e-43 178.3 118 69.5
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 5.3e-42 174.5 108 75.0
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 9.0e-42 173.7 118 67.8
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 2.9e-40 168.7 112 71.4
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 8.5e-40 167.2 115 67.0
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.1e-39 166.8 129 58.9
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 5.1e-37 157.9 105 69.5
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 2.0e-36 156.0 105 68.6
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 3.3e-36 155.2 128 64.8
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.8e-34 149.4 105 66.7
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 2.6e-33 145.6 122 53.3
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 3.4e-33 145.2 113 57.5
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 5.9e-33 144.4 104 61.5
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 1.7e-32 142.9 90 78.9
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 2.9e-32 142.1 99 63.6
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 2.9e-32 142.1 122 51.6
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 3.0e-29 132.1 96 66.7
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 5.1e-29 131.3 77 80.5
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 4.4e-28 128.3 90 65.6
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 5.7e-28 127.9 129 46.5
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.7e-27 126.3 128 45.3
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 2.8e-27 125.6 105 52.4
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 4.8e-27 124.8 127 48.0
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 1.8e-26 122.9 87 66.7
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 1.8e-26 122.9 131 48.9
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.2e-25 120.2 79 68.4
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 5.9e-25 117.9 116 48.3
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 1.0e-24 117.1 105 52.4
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 2.1e-22 109.4 131 50.4
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 1.1e-20 103.6 65 69.2
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 2.0e-20 102.8 130 48.5
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 7.7e-17 90.9 63 60.3
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 6.5e-16 87.8 63 66.7
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 3.7e-11 72.0 58 63.8
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 4.8e-11 71.6 43 72.1
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 4.1e-10 68.6 45 71.1
MD15G1372000 Malus domestica HOM05D006897 ORTHO05D248129 5.4e-10 68.2 45 66.7
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 1.6e-09 66.6 39 71.8


User provided reference genes

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