Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 1.3e-82 309.7 156 100.0
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 1.5e-62 243.0 156 79.5
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 4.3e-62 241.5 156 78.2
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 1.7e-58 229.6 148 79.7
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 2.9e-58 228.8 148 78.4
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 4.9e-58 228.0 152 78.9
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 2.4e-57 225.7 152 77.0
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 7.4e-54 214.2 150 70.0
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 2.8e-53 212.2 152 70.4
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 2.4e-52 209.1 148 71.6
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 5.3e-52 208.0 150 71.3
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 5.3e-52 208.0 148 68.9
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 9.0e-52 207.2 150 70.0
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 1.2e-51 206.8 149 73.2
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 2.6e-51 205.7 151 70.2
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 4.5e-51 204.9 150 71.3
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 2.4e-49 199.1 151 69.5
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 3.2e-49 198.7 151 71.5
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 5.5e-49 198.0 149 68.5
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 1.6e-48 196.4 150 70.7
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 2.1e-48 196.1 148 68.2
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.7e-48 195.7 149 66.4
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 4.6e-48 194.9 148 68.2
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.3e-47 193.4 149 65.8
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.3e-47 192.6 149 65.1
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 3.0e-47 192.2 149 65.1
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 3.0e-47 192.2 142 67.6
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 3.9e-47 191.8 148 67.6
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 8.7e-47 190.7 148 65.5
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 1.1e-46 190.3 149 70.5
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 1.5e-46 189.9 149 69.8
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 1.5e-46 189.9 149 69.8
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 4.3e-46 188.3 152 65.8
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 7.4e-46 187.6 142 66.2
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 7.4e-46 187.6 142 66.2
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 1.6e-45 186.4 98 94.9
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 3.7e-45 185.3 148 64.9
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 4.8e-45 184.9 148 67.6
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 6.2e-45 184.5 148 65.5
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.4e-44 183.3 158 62.7
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 1.8e-44 183.0 148 66.2
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 5.3e-44 181.4 145 66.9
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 5.3e-44 181.4 148 64.9
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.5e-43 179.9 119 73.1
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 1.5e-43 179.9 148 64.2
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 2.6e-43 179.1 156 59.0
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 3.4e-43 178.7 153 64.7
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 3.4e-43 178.7 144 66.7
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 2.9e-42 175.6 151 62.9
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.9e-41 172.9 108 77.8
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 2.1e-40 169.5 138 65.9
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 2.7e-40 169.1 150 60.0
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 7.9e-40 167.5 107 73.8
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 1.0e-39 167.2 150 62.0
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 1.8e-39 166.4 149 61.1
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 3.0e-39 165.6 150 62.0
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 3.9e-39 165.2 147 61.9
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 8.7e-39 164.1 145 60.0
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 5.7e-38 161.4 144 63.2
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 5.7e-38 161.4 148 59.5
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 1.6e-37 159.8 146 61.6
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 1.6e-37 159.8 148 58.8
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 4.8e-37 158.3 158 57.0
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 4.8e-37 158.3 118 65.3
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 2.4e-36 156.0 145 60.0
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.5e-35 153.3 124 65.3
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 2.0e-35 152.9 146 60.3
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 2.6e-35 152.5 145 59.3
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 2.6e-35 152.5 145 60.7
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 2.6e-35 152.5 145 60.7
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 2.6e-35 152.5 156 55.1
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 3.4e-35 152.1 145 60.0
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 1.0e-34 150.6 144 61.8
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 1.3e-34 150.2 149 57.0
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 1.7e-34 149.8 138 60.9
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 2.9e-34 149.1 145 57.9
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 3.8e-34 148.7 149 53.7
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 3.8e-34 148.7 146 60.3
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 3.8e-34 148.7 146 59.6
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 1.4e-33 146.7 146 59.6
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 1.4e-33 146.7 146 60.3
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 3.2e-33 145.6 149 57.7
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 4.2e-33 145.2 149 57.0
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 4.2e-33 145.2 149 57.0
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 5.5e-33 144.8 149 54.4
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 9.4e-33 144.1 146 56.8
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 1.2e-32 143.7 145 55.2
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 1.2e-32 143.7 148 56.8
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 1.2e-32 143.7 139 57.6
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 3.6e-32 142.1 145 54.5
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 3.6e-32 142.1 152 54.6
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 4.6e-32 141.7 136 58.8
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 4.6e-32 141.7 148 56.8
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 1.0e-31 140.6 141 56.0
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 3.0e-31 139.0 145 55.2
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 5.1e-31 138.3 143 55.2
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 5.1e-31 138.3 115 60.9
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 3.3e-30 135.6 151 55.0
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 6.3e-29 131.3 145 54.5
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.4e-28 130.2 125 57.6
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 1.8e-28 129.8 140 51.4
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 2.4e-28 129.4 136 54.4
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 3.1e-28 129.0 152 53.9
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 3.1e-28 129.0 104 61.5
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.3e-26 123.6 115 54.8
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.7e-26 123.2 144 50.0
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 2.2e-26 122.9 80 78.8
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 2.2e-26 122.9 80 78.8
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 2.2e-26 122.9 131 49.6
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 1.9e-25 119.8 83 74.7
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 2.7e-24 115.9 145 46.9
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.4e-23 113.6 141 47.5
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 2.3e-23 112.8 146 50.0
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 1.5e-22 110.2 151 50.3
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 2.0e-19 99.8 102 54.9
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 5.0e-18 95.1 102 53.9
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 6.5e-18 94.7 137 46.0
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 1.4e-17 93.6 102 52.9
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 1.4e-17 93.6 102 52.9
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 1.2e-16 90.5 110 51.8
Nn1g08859 Nelumbo nucifera HOM05D006043 ORTHO05D007309 6.1e-16 88.2 63 69.8
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.3e-13 80.5 70 55.7
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 1.6e-11 73.6 96 49.0
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 1.2e-08 63.9 146 34.9
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 5.2e-07 58.5 118 41.5


User provided reference genes

Program Settings