Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G112700 Prunus persica HOM05D008297 ORTHO05D010093 6.8e-84 313.9 155 100.0
MD12G1023800 Malus domestica HOM05D008297 ORTHO05D010093 1.7e-47 193.0 148 69.6
FAN02G0390 Fragaria x ananassa HOM05D008297 ORTHO05D010093 9.6e-38 160.6 141 59.6
FvH4_6g18470 Fragaria vesca HOM05D008297 ORTHO05D010093 8.1e-37 157.5 141 58.9
FAN14G3031 Fragaria x ananassa HOM05D008297 ORTHO05D010093 1.8e-36 156.4 141 58.2
FAN09G3035 Fragaria x ananassa HOM05D008297 ORTHO05D010093 4.0e-36 155.2 141 58.2
FAN05G0841 Fragaria x ananassa HOM05D008297 ORTHO05D010093 9.0e-36 154.1 141 58.2
FAN05G0196 Fragaria x ananassa HOM05D008297 ORTHO05D010093 4.5e-35 151.8 141 57.4
MD14G1021000 Malus domestica HOM05D008297 ORTHO05D010093 1.4e-33 146.7 114 68.4
RcHm_v2.0_Chr3g0473001 Rosa chinensis HOM05D008297 ORTHO05D010093 1.4e-25 120.2 83 72.3
CiPaw.10G008500 Carya illinoinensis HOM05D008297 ORTHO05D010093 6.0e-24 114.8 123 54.5
Cfa016593 Carpinus fangiana HOM05D008297 ORTHO05D010093 7.4e-22 107.8 113 53.1
CiPaw.09G012800 Carya illinoinensis HOM05D008297 ORTHO05D010093 2.8e-21 105.9 122 52.5
Haze_19594 Corylus avellana HOM05D008297 ORTHO05D010093 4.8e-21 105.1 113 53.1
CANSAT80G2610 Cannabis sativa HOM05D008297 ORTHO05D010093 2.4e-20 102.8 122 53.3
QL07p039287 Quercus lobata HOM05D008297 ORTHO05D010093 1.2e-19 100.5 102 57.8
Dinv31675 Davidia involucrata HOM05D008297 ORTHO05D010093 5.8e-19 98.2 113 49.6
PGR004G2620 Punica granatum HOM05D008297 ORTHO05D010093 1.3e-18 97.1 106 50.0
Thecc.05G087300 Theobroma cacao HOM05D008297 ORTHO05D010093 1.3e-18 97.1 117 48.7
Glyma.10G071300 Glycine max HOM05D008297 ORTHO05D010093 4.2e-17 92.0 97 51.5
Medtr1g060240 Medicago truncatula HOM05D008297 ORTHO05D010093 4.2e-17 92.0 102 49.0
Ciclev10013717m.g Citrus clementina HOM05D008297 ORTHO05D010093 3.5e-16 89.0 89 53.9
Duzib093G1918 Durio zibethinus HOM05D008297 ORTHO05D010093 4.6e-16 88.6 96 46.9
Lj5g0010223 Lotus japonicus HOM05D008297 ORTHO05D010093 1.0e-15 87.4 86 53.5
Oeu056894.1 Olea europaea HOM05D008297 ORTHO05D010093 1.3e-15 87.0 58 63.8
COL.COLO4_29766 Corchorus olitorius HOM05D008297 ORTHO05D010093 6.7e-15 84.7 86 50.0
Cpa.g.sc5.36 Carica papaya HOM05D008297 ORTHO05D010093 8.7e-15 84.3 59 64.4
Lalb_Chr06g0173271 Lupinus albus HOM05D008297 ORTHO05D010093 1.9e-14 83.2 97 43.3
TPR.G24588 Trifolium pratense HOM05D008297 ORTHO05D010093 1.9e-14 83.2 102 45.1
Potri.004G142600 Populus trichocarpa HOM05D008297 ORTHO05D010093 2.5e-14 82.8 65 60.0
Manes.08G024300 Manihot esculenta HOM05D008297 ORTHO05D010093 4.3e-14 82.0 56 66.1
Rhsim04G0131800 Rhododendron simsii HOM05D008297 ORTHO05D010093 4.3e-14 82.0 84 51.2
Gohir.D01G196400 Gossypium hirsutum HOM05D008297 ORTHO05D010093 1.3e-13 80.5 58 62.1
Gorai.002G240600 Gossypium raimondii HOM05D008297 ORTHO05D010093 1.3e-13 80.5 58 62.1
TWI74G0146 Tripterygium wilfordii HOM05D008297 ORTHO05D010093 1.6e-13 80.1 98 46.9
Gohir.A01G207000 Gossypium hirsutum HOM05D008297 ORTHO05D010093 2.2e-13 79.7 58 62.1
VMungo0720G0603 Vigna mungo HOM05D008297 ORTHO05D010093 2.8e-13 79.3 96 45.8
MSTRG.19253 Avicennia marina HOM05D008297 ORTHO05D010093 3.7e-13 79.0 58 62.1
Manes.09G056350 Manihot esculenta HOM05D008297 ORTHO05D010093 3.7e-13 79.0 54 68.5
AUR62033499 Chenopodium quinoa HOM05D008297 ORTHO05D010093 6.3e-13 78.2 92 43.5
AUR62028547 Chenopodium quinoa HOM05D008297 ORTHO05D010093 8.2e-13 77.8 92 43.5
Phvul.007G229200 Phaseolus vulgaris HOM05D008297 ORTHO05D010093 1.8e-12 76.6 96 46.9
Ah.15g090940 Amaranthus hybridus HOM05D008297 ORTHO05D010093 2.4e-12 76.3 61 55.7
MSTRG.5838 Avicennia marina HOM05D008297 ORTHO05D010093 5.3e-12 75.1 55 61.8
ECA233G2556 Erigeron canadensis HOM05D000444 ORTHO05D000489 1.5e-11 73.6 54 61.1
Eucgr.A01506 Eucalyptus grandis HOM05D008297 ORTHO05D010093 5.9e-11 71.6 109 38.5
EL10Ac7g16932 Beta vulgaris HOM05D008297 ORTHO05D010093 7.7e-11 71.2 57 54.4
Nn5g28531 Nelumbo nucifera HOM05D008297 ORTHO05D010093 1.3e-10 70.5 77 49.4
Psat6g014040 Pisum sativum HOM05D008297 ORTHO05D010093 1.7e-10 70.1 76 48.7
Actinidia31275 Actinidia chinensis HOM05D008297 ORTHO05D010093 2.2e-10 69.7 123 38.2
MBI17_g01565_MAGBIO Magnolia biondii HOM05D008297 ORTHO05D010093 2.2e-10 69.7 54 57.4
Nn6g34936 Nelumbo nucifera HOM05D008297 ORTHO05D010093 2.2e-10 69.7 71 54.9
Migut.J01050 Erythranthe guttata HOM05D008297 ORTHO05D010093 3.8e-10 68.9 56 60.7
Aqoxy6G02838 Aquilegia oxysepala HOM05D008297 ORTHO05D010093 1.1e-09 67.4 70 48.6
Lsat_1_v5_gn_6_24180 Lactuca sativa HOM05D008297 ORTHO05D010093 1.9e-09 66.6 87 43.7
ClCG10G019060 Citrullus lanatus HOM05D008297 ORTHO05D010093 9.4e-09 64.3 62 51.6
Thhalv10017448m.g Eutrema salsugineum HOM05D012350 ORTHO05D010093 1.2e-08 63.9 65 52.3
AL4G32400 Arabidopsis lyrata HOM05D012350 ORTHO05D010093 1.6e-08 63.5 65 50.8
CiPaw.10G008800 Carya illinoinensis HOM05D008297 ORTHO05D010093 1.6e-08 63.5 68 51.5
MELO3C009464.2 Cucumis melo HOM05D008297 ORTHO05D010093 2.1e-08 63.2 99 45.5
TAR633G2623 Trochodendron aralioides HOM05D008297 ORTHO05D010093 2.7e-08 62.8 77 48.1
Sed0021862 Sechium edule HOM05D008297 ORTHO05D010093 6.1e-08 61.6 96 43.8
Carub.0004s1804 Capsella rubella HOM05D012350 ORTHO05D010093 7.9e-08 61.2 60 51.7
CsaV3_3G037180 Cucumis sativus L. HOM05D008297 ORTHO05D010093 7.9e-08 61.2 58 55.2
arahy.Tifrunner.gnm1.ann1.MHCF32 Arachis hypogaea HOM05D057207 ORTHO05D010093 5.1e-07 58.5 116 37.9
arahy.Tifrunner.gnm1.ann1.SCUD5X Arachis hypogaea HOM05D057207 ORTHO05D010093 5.1e-07 58.5 116 37.9
AT2G36295 Arabidopsis thaliana HOM05D012350 ORTHO05D010093 3.3e-06 55.8 65 47.7
BcaB06g28926 Brassica carinata HOM05D012350 ORTHO05D010093 4.3e-06 55.5 66 50.0
Sp4g18510 Schrenkiella parvula HOM05D012350 ORTHO05D010093 5.7e-06 55.1 64 48.4
Aa31LG5G21420 Aethionema arabicum HOM05D012350 ORTHO05D010093 7.4e-06 54.7 54 57.4
BcaC02g07617 Brassica carinata HOM05D012350 ORTHO05D010093 7.4e-06 54.7 56 53.6
C04p65290 Brassica napus HOM05D012350 ORTHO05D010093 7.4e-06 54.7 56 53.6
BraA04t18271Z Brassica rapa HOM05D012350 ORTHO05D010093 7.4e-06 54.7 56 53.6


User provided reference genes

Program Settings