Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G106800 Prunus persica HOM05D002652 ORTHO05D002739 1.1e-69 266.5 132 100.0
FAN17G3082 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.2e-12 77.0 90 44.4
FAN12G4037 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.6e-12 76.6 84 47.6
Carub.0007s2911 Capsella rubella HOM05D002652 ORTHO05D002739 6.5e-11 71.2 83 45.8
RcHm_v2.0_Chr4g0395571 Rosa chinensis HOM05D002652 ORTHO05D002739 1.5e-10 70.1 84 44.0
CARHR219080 Cardamine hirsuta HOM05D002652 ORTHO05D002739 2.5e-10 69.3 83 47.0
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 2.5e-10 69.3 88 39.8
PGR044G1935 Punica granatum HOM05D002652 ORTHO05D002739 4.7e-09 65.1 85 41.2
THA.LOC104821630 Tarenaya hassleriana HOM05D002652 ORTHO05D002739 6.1e-09 64.7 83 42.2
BcaC04g21865 Brassica carinata HOM05D002652 ORTHO05D002739 8.0e-09 64.3 83 41.0
C09p26400 Brassica napus HOM05D002652 ORTHO05D002739 8.0e-09 64.3 83 41.0
BolC9t55542H Brassica oleracea HOM05D002652 ORTHO05D002739 8.0e-09 64.3 83 41.0
BcaB07g30971 Brassica carinata HOM05D002652 ORTHO05D002739 1.0e-08 63.9 83 41.0
Aa31LG7G1660 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.8e-08 63.2 83 43.4
Aa31LG7G1670 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.8e-08 63.2 83 43.4
Potri.019G029000 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.8e-08 63.2 88 38.6
Aa31LG9G4240 Aethionema arabicum HOM05D002652 ORTHO05D002739 3.0e-08 62.4 83 43.4
A09p20860 Brassica napus HOM05D002652 ORTHO05D002739 3.0e-08 62.4 83 39.8
BraA09t37688Z Brassica rapa HOM05D002652 ORTHO05D002739 3.0e-08 62.4 83 39.8
Haze_11422 Corylus avellana HOM05D001324 ORTHO05D001220 3.0e-08 62.4 82 42.7
PGR044G0093 Punica granatum HOM05D002652 ORTHO05D002739 3.0e-08 62.4 85 38.8
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 4.0e-08 62.0 82 42.7
Cfa014794 Carpinus fangiana HOM05D002652 ORTHO05D002739 5.2e-08 61.6 87 39.1
Aa31LG7G1750 Aethionema arabicum HOM05D002652 ORTHO05D002739 6.7e-08 61.2 83 42.2
CiPaw.08G106800 Carya illinoinensis HOM05D002652 ORTHO05D002739 6.7e-08 61.2 89 39.3
FAN10G1323 Fragaria x ananassa HOM05D002652 ORTHO05D002739 6.7e-08 61.2 83 44.6
FAN10G2095 Fragaria x ananassa HOM05D002652 ORTHO05D002739 6.7e-08 61.2 83 44.6
Rhsim02G0047000 Rhododendron simsii HOM05D002652 ORTHO05D002739 6.7e-08 61.2 86 36.0
RcHm_v2.0_Chr4g0395751 Rosa chinensis HOM05D002652 ORTHO05D002739 6.7e-08 61.2 85 37.6
Sabra19G0035200 Salix brachista HOM05D002652 ORTHO05D002739 6.7e-08 61.2 88 39.8
Sabra19G0035400 Salix brachista HOM05D002652 ORTHO05D002739 6.7e-08 61.2 88 39.8
FAN12G2993 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.2e-07 60.5 83 44.6
CiPaw.08G106400 Carya illinoinensis HOM05D002652 ORTHO05D002739 2.6e-07 59.3 88 38.6
COL.COLO4_15901 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.6e-07 59.3 89 34.8
FvH4_4g04760 Fragaria vesca HOM05D002652 ORTHO05D045822 2.6e-07 59.3 85 40.0
QL08p018841 Quercus lobata HOM05D002652 ORTHO05D002739 3.3e-07 58.9 83 41.0
RcHm_v2.0_Chr4g0395461 Rosa chinensis HOM05D002652 ORTHO05D002739 3.3e-07 58.9 80 38.8
Actinidia11376 Actinidia chinensis HOM05D002652 ORTHO05D002739 4.4e-07 58.5 85 40.0
Aa31LG7G1800 Aethionema arabicum HOM05D002652 ORTHO05D002739 4.4e-07 58.5 87 39.1
CiPaw.08G106600 Carya illinoinensis HOM05D002652 ORTHO05D002739 4.4e-07 58.5 88 37.5
COL.COLO4_15902 Corchorus olitorius HOM05D002652 ORTHO05D002739 5.7e-07 58.2 89 38.2
FvH4_4g04740 Fragaria vesca HOM05D002652 ORTHO05D002739 5.7e-07 58.2 82 43.9
FvH4_4g04860 Fragaria vesca HOM05D002652 ORTHO05D002739 5.7e-07 58.2 84 39.3
Potri.019G027440 Populus trichocarpa HOM05D002652 ORTHO05D002739 5.7e-07 58.2 88 37.5
QL06p021327 Quercus lobata HOM05D002652 ORTHO05D002739 5.7e-07 58.2 83 41.0
Sabra19G0038900 Salix brachista HOM05D002652 ORTHO05D002739 5.7e-07 58.2 88 42.0
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 5.7e-07 58.2 82 41.5
vmacro15484 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 5.7e-07 58.2 89 37.1
MSTRG.4180 Avicennia marina HOM05D002652 ORTHO05D002739 7.5e-07 57.8 79 40.5
MSTRG.4181 Avicennia marina HOM05D002652 ORTHO05D002739 7.5e-07 57.8 79 39.2
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 7.5e-07 57.8 86 38.4
Haze_11472 Corylus avellana HOM05D002652 ORTHO05D002739 9.7e-07 57.4 84 39.3
COL.COLO4_15909 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.3e-06 57.0 88 35.2
Sabra11G0121600 Salix brachista HOM05D002652 ORTHO05D002739 1.3e-06 57.0 88 37.5
Haze_25448 Corylus avellana HOM05D002652 ORTHO05D002739 1.7e-06 56.6 85 40.0
QL06p021274 Quercus lobata HOM05D002652 ORTHO05D002739 1.7e-06 56.6 83 36.1
TAR636G2313 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.7e-06 56.6 79 38.0
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.2e-06 56.2 89 38.2
RhsimUnG0058100 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.2e-06 56.2 89 36.0
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.8e-06 55.8 88 38.6
Hma1.2p1_0042F.1_g025730 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 2.8e-06 55.8 88 35.2
Nn1g09048 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.8e-06 55.8 103 34.0
Aa31LG9G4210 Aethionema arabicum HOM05D002652 ORTHO05D002739 3.7e-06 55.5 80 33.8
Aqoxy7G00431 Aquilegia oxysepala HOM05D002652 ORTHO05D002739 3.7e-06 55.5 81 35.8
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 3.7e-06 55.5 86 38.4
Migut.N00305 Erythranthe guttata HOM05D002652 ORTHO05D002739 4.8e-06 55.1 80 40.0
FvH4_4g04980 Fragaria vesca HOM05D002652 ORTHO05D002739 4.8e-06 55.1 85 36.5
Potri.019G026780 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.8e-06 55.1 88 37.5
MSTRG.4182 Avicennia marina HOM05D002652 ORTHO05D002739 6.3e-06 54.7 80 41.2


User provided reference genes

Program Settings