Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G106200 Prunus persica HOM05D002400 ORTHO05D002568 1.3e-85 319.7 158 100.0
MD00G1221800 Malus domestica HOM05D002400 ORTHO05D002568 1.8e-28 129.8 112 60.7
MD12G1026500 Malus domestica HOM05D002400 ORTHO05D002568 5.4e-28 128.3 112 60.7
RcHm_v2.0_Chr3g0474021 Rosa chinensis HOM05D002400 ORTHO05D002568 6.6e-26 121.3 123 52.0
RcHm_v2.0_Chr3g0474001 Rosa chinensis HOM05D002400 ORTHO05D002568 1.9e-25 119.8 111 55.9
RcHm_v2.0_Chr3g0474171 Rosa chinensis HOM05D002400 ORTHO05D002568 1.2e-24 117.1 112 53.6
FvH4_6g19020 Fragaria vesca HOM05D002400 ORTHO05D002568 4.7e-24 115.2 112 53.6
FAN02G4410 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.7e-24 115.2 112 54.5
RcHm_v2.0_Chr3g0474091 Rosa chinensis HOM05D002400 ORTHO05D002568 6.2e-24 114.8 107 52.3
FAN05G4425 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.2e-23 111.7 111 52.3
MD14G1026600 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-22 110.5 112 50.0
RcHm_v2.0_Chr3g0474111 Rosa chinensis HOM05D002400 ORTHO05D002568 1.2e-22 110.5 113 51.3
FvH4_6g33960 Fragaria vesca HOM05D002400 ORTHO05D002568 4.4e-22 108.6 112 50.0
FAN02G2106 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.8e-22 107.5 119 48.7
FAN09G2665 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.8e-22 107.5 111 51.4
Prupe.7G108600 Prunus persica HOM05D002400 ORTHO05D002568 9.8e-22 107.5 108 53.7
RcHm_v2.0_Chr3g0474141 Rosa chinensis HOM05D002400 ORTHO05D002568 9.8e-22 107.5 80 62.5
RcHm_v2.0_Chr7g0217271 Rosa chinensis HOM05D002400 ORTHO05D002568 1.3e-21 107.1 111 48.6
Prupe.7G105000 Prunus persica HOM05D002400 ORTHO05D002568 2.9e-21 105.9 112 50.0
FAN09G1471 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.9e-21 105.1 112 51.8
FvH4_5g26410 Fragaria vesca HOM05D002400 ORTHO05D002568 1.4e-20 103.6 112 47.3
MD04G1058800 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-20 103.6 134 44.0
MD14G1025100 Malus domestica HOM05D002400 ORTHO05D002568 1.9e-20 103.2 112 52.7
FvH4_5g26390 Fragaria vesca HOM05D002400 ORTHO05D002568 2.4e-20 102.8 111 47.7
FvH4_6g19010 Fragaria vesca HOM05D002400 ORTHO05D002568 2.4e-20 102.8 111 51.4
FAN18G2424 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.2e-20 102.4 112 46.4
MD14G1024900 Malus domestica HOM05D002400 ORTHO05D002568 5.4e-20 101.7 112 54.5
MD14G1025600 Malus domestica HOM05D002400 ORTHO05D002568 7.0e-20 101.3 113 45.1
RcHm_v2.0_Chr3g0474191 Rosa chinensis HOM05D002400 ORTHO05D002568 7.0e-20 101.3 113 48.7
FvH4_6g18954 Fragaria vesca HOM05D002400 ORTHO05D002568 9.2e-20 100.9 114 49.1
FAN14G3084 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.2e-20 100.9 106 52.8
RcHm_v2.0_Chr7g0205891 Rosa chinensis HOM05D002400 ORTHO05D002568 9.2e-20 100.9 114 49.1
MD14G1025400 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-19 100.5 112 50.0
MD14G1025200 Malus domestica HOM05D002400 ORTHO05D002568 1.6e-19 100.1 113 46.0
MD14G1026300 Malus domestica HOM05D002400 ORTHO05D002568 1.6e-19 100.1 106 49.1
Prupe.7G105500 Prunus persica HOM05D002400 ORTHO05D002568 1.6e-19 100.1 114 49.1
RcHm_v2.0_Chr3g0474161 Rosa chinensis HOM05D002400 ORTHO05D002568 1.6e-19 100.1 77 59.7
Prupe.7G105900 Prunus persica HOM05D002400 ORTHO05D002568 3.5e-19 99.0 113 51.3
MD14G1025300 Malus domestica HOM05D002400 ORTHO05D002568 4.6e-19 98.6 112 49.1
MD14G1026400 Malus domestica HOM05D002400 ORTHO05D002568 6.0e-19 98.2 112 48.2
RcHm_v2.0_Chr3g0475381 Rosa chinensis HOM05D002400 ORTHO05D002568 7.8e-19 97.8 112 44.6
Prupe.2G052100 Prunus persica HOM05D002400 ORTHO05D002568 1.3e-18 97.1 112 49.1
RcHm_v2.0_Chr3g0474031 Rosa chinensis HOM05D002400 ORTHO05D002568 1.3e-18 97.1 113 48.7
RcHm_v2.0_Chr3g0475391 Rosa chinensis HOM05D002400 ORTHO05D002568 1.7e-18 96.7 99 48.5
MD14G1024100 Malus domestica HOM05D002400 ORTHO05D002568 2.3e-18 96.3 112 47.3
MD14G1026700 Malus domestica HOM05D002400 ORTHO05D002568 3.0e-18 95.9 142 42.3
MD12G1026800 Malus domestica HOM05D002400 ORTHO05D002568 3.9e-18 95.5 112 50.0
FvH4_6g18982 Fragaria vesca HOM05D002400 ORTHO05D002568 5.0e-18 95.1 116 50.0
FAN05G4159 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.0e-18 95.1 109 48.6
FAN18G1895 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.0e-18 95.1 97 54.6
Prupe.5G196300 Prunus persica HOM05D002400 ORTHO05D002568 8.6e-18 94.4 77 55.8
FvH4_6g18920 Fragaria vesca HOM05D002400 ORTHO05D002568 1.1e-17 94.0 109 47.7
FAN18G4571 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-17 94.0 115 48.7
FvH4_1g23521 Fragaria vesca HOM05D002400 ORTHO05D002568 1.5e-17 93.6 113 43.4
MD14G1026000 Malus domestica HOM05D002400 ORTHO05D002568 2.5e-17 92.8 102 48.0
RcHm_v2.0_Chr3g0473911 Rosa chinensis HOM05D002400 ORTHO05D002568 2.5e-17 92.8 112 46.4
Prupe.7G106400 Prunus persica HOM05D002400 ORTHO05D002568 3.3e-17 92.4 111 49.5
FvH4_5g20530 Fragaria vesca HOM05D002400 ORTHO05D002568 4.3e-17 92.0 115 48.7
FAN14G2096 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-16 90.5 110 50.9
RcHm_v2.0_Chr5g0069001 Rosa chinensis HOM05D002400 ORTHO05D002568 1.6e-16 90.1 75 57.3
FAN06G0647 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.8e-16 89.4 112 46.4
FvH4_6g19030 Fragaria vesca HOM05D002400 ORTHO05D002568 3.6e-16 89.0 113 48.7
RcHm_v2.0_Chr7g0205961 Rosa chinensis HOM05D002400 ORTHO05D002568 3.6e-16 89.0 114 43.9
FvH4_7g12363 Fragaria vesca HOM05D002400 ORTHO05D002568 8.1e-16 87.8 95 49.5
Prupe.6G269600 Prunus persica HOM05D002400 ORTHO05D002568 8.1e-16 87.8 103 50.5
FAN08G1360 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.3e-15 86.3 114 44.7
FAN06G2837 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-15 85.9 112 45.5
MD14G1026200 Malus domestica HOM05D002400 ORTHO05D002568 3.1e-15 85.9 77 54.5
FvH4_6g33920 Fragaria vesca HOM05D002400 ORTHO05D002568 5.2e-15 85.1 106 44.3
FAN06G5021 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.2e-15 85.1 122 41.8
FAN14G5626 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.2e-15 85.1 106 44.3
MD12G1202000 Malus domestica HOM05D002400 ORTHO05D002568 5.2e-15 85.1 115 42.6
Prupe.7G104800 Prunus persica HOM05D002400 ORTHO05D002568 6.8e-15 84.7 81 53.1
FAN18G0503 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.9e-15 84.3 76 52.6
FAN08G0492 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.4e-14 82.4 85 54.1
FAN14G2794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.4e-14 82.4 110 41.8
MD02G1269000 Malus domestica HOM05D002400 ORTHO05D002568 3.4e-14 82.4 80 53.8
FvH4_6g22710 Fragaria vesca HOM05D002400 ORTHO05D002568 4.4e-14 82.0 110 41.8
FAN18G0377 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.4e-14 82.0 114 43.0
FAN14G4887 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.8e-14 81.6 103 42.7
FvH4_6g19361 Fragaria vesca HOM05D002400 ORTHO05D002568 7.5e-14 81.3 135 39.3
FAN09G3427 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.5e-14 81.3 109 43.1
FvH4_6g33902 Fragaria vesca HOM05D002400 ORTHO05D002568 9.8e-14 80.9 103 41.7
RcHm_v2.0_Chr3g0474131 Rosa chinensis HOM05D002400 ORTHO05D002568 9.8e-14 80.9 83 49.4
FvH4_6g19090 Fragaria vesca HOM05D002400 ORTHO05D002568 1.3e-13 80.5 105 42.9
FAN14G5714 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-13 80.5 94 44.7
RcHm_v2.0_Chr3g0481121 Rosa chinensis HOM05D002400 ORTHO05D002568 1.3e-13 80.5 114 39.5
FvH4_6g18952 Fragaria vesca HOM05D002400 ORTHO05D002568 1.7e-13 80.1 111 40.5
FAN02G2515 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.2e-13 79.7 109 41.3
MD12G1217700 Malus domestica HOM05D002400 ORTHO05D002568 2.2e-13 79.7 116 43.1
FAN14G5260 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.9e-13 79.3 110 40.9
MD14G1025800 Malus domestica HOM05D002400 ORTHO05D002568 2.9e-13 79.3 106 41.5
RcHm_v2.0_Chr1g0330111 Rosa chinensis HOM05D002400 ORTHO05D002568 2.9e-13 79.3 79 54.4
RcHm_v2.0_Chr5g0068981 Rosa chinensis HOM05D002400 ORTHO05D002568 2.9e-13 79.3 77 45.5
FAN05G0221 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.7e-13 79.0 109 40.4
RcHm_v2.0_Chr3g0473961 Rosa chinensis HOM05D002400 ORTHO05D002568 4.9e-13 78.6 110 45.5
FAN08G3505 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-12 77.4 115 42.6
MD12G1201900 Malus domestica HOM05D002400 ORTHO05D002568 1.1e-12 77.4 115 42.6
MD04G1145900 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-12 77.0 81 51.9
MD14G1157200 Malus domestica HOM05D002400 ORTHO05D002568 1.9e-12 76.6 129 37.2
Prupe.6G311500 Prunus persica HOM05D002400 ORTHO05D002568 1.9e-12 76.6 113 40.7
FAN04G1411 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.2e-12 75.9 108 43.5
FAN14G5794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.2e-12 75.9 81 49.4
MD12G1025400 Malus domestica HOM05D002400 ORTHO05D002568 3.2e-12 75.9 115 38.3
FAN04G0043 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.1e-12 75.5 85 50.6
RcHm_v2.0_Chr3g0474041 Rosa chinensis HOM05D002400 ORTHO05D002568 7.1e-12 74.7 110 41.8
vmacro05682 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 9.2e-12 74.3 113 38.9
FAN18G0208 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-11 73.9 110 42.7
MD04G1145400 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-11 73.9 88 48.9
MD12G1217800 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-11 73.9 116 39.7
FAN04G2586 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-11 73.6 83 45.8
RcHm_v2.0_Chr3g0474181 Rosa chinensis HOM05D002400 ORTHO05D002568 2.7e-11 72.8 67 55.2
vmacro12123 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 2.7e-11 72.8 113 37.2
FvH4_6g05280 Fragaria vesca HOM05D002400 ORTHO05D002568 7.8e-11 71.2 96 42.7
FvH4_6g19040 Fragaria vesca HOM05D002400 ORTHO05D002568 7.8e-11 71.2 110 40.0
FAN14G3389 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.8e-11 71.2 96 42.7
FAN14G5637 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.8e-11 71.2 96 42.7
FAN14G5775 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.8e-11 71.2 116 41.4
FvH4_6g18950 Fragaria vesca HOM05D002400 ORTHO05D002568 1.0e-10 70.9 112 37.5
FAN05G2917 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.0e-10 70.9 125 39.2
FvH4_5g32301 Fragaria vesca HOM05D002400 ORTHO05D002568 1.3e-10 70.5 112 40.2
FvH4_6g19370 Fragaria vesca HOM05D002400 ORTHO05D002568 1.7e-10 70.1 116 40.5
FAN05G2337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.7e-10 70.1 96 41.7
FAN09G4054 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.0e-10 69.3 89 44.9
FvH4_7g04740 Fragaria vesca HOM05D002400 ORTHO05D002568 3.9e-10 68.9 97 42.3
FAN03G0307 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.9e-10 68.9 97 42.3
FAN06G1414 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.9e-10 68.9 97 42.3
FvH4_6g19051 Fragaria vesca HOM05D002400 ORTHO05D002568 8.6e-10 67.8 75 46.7
FvH4_7g09171 Fragaria vesca HOM05D000003 ORTHO05D002568 8.6e-10 67.8 84 42.9
FvH4_6g18911 Fragaria vesca HOM05D002400 ORTHO05D002568 1.1e-09 67.4 125 37.6
FAN09G1480 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-09 67.4 112 36.6
FvH4_6g08300 Fragaria vesca HOM05D002400 ORTHO05D002568 1.9e-09 66.6 111 33.3
FAN05G1596 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-09 66.6 112 32.1
FAN14G3017 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-09 66.6 111 33.3
FAN19G0352 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-09 66.6 78 39.7
QL02p059625 Quercus lobata HOM05D002400 ORTHO05D002568 1.9e-09 66.6 89 39.3
FvH4_6g18961 Fragaria vesca HOM05D002400 ORTHO05D002568 3.3e-09 65.9 76 43.4
FAN05G1326 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.3e-09 65.5 112 35.7
RcHm_v2.0_Chr3g0458171 Rosa chinensis HOM05D002400 ORTHO05D002568 5.6e-09 65.1 112 37.5
FAN02G3141 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.3e-09 64.7 111 32.4
FAN06G4070 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.5e-09 64.3 115 38.3
Manes.09G032300 Manihot esculenta HOM05D002400 ORTHO05D002568 9.5e-09 64.3 99 36.4
MD04G1145500 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-08 63.9 134 38.1
vmacro12117 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 1.2e-08 63.9 79 44.3
FAN18G0337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.1e-08 63.2 121 33.9
Prupe.1G551800 Prunus persica HOM05D002400 ORTHO05D002568 2.1e-08 63.2 113 36.3
vmacro05683 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 3.6e-08 62.4 142 33.1
Haze_24470 Corylus avellana HOM05D002400 ORTHO05D002568 4.7e-08 62.0 104 38.5
FAN05G2957 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.7e-08 62.0 114 36.8
FAN05G0305 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.2e-08 61.6 62 46.8
FAN05G1294 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.1e-08 61.2 92 33.7
FvH4_5g29160 Fragaria vesca HOM05D002400 ORTHO05D002568 1.1e-07 60.8 104 36.5
FAN10G1459 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-07 60.1 64 48.4
FAN26G2620 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-07 60.1 63 50.8
FAN09G0521 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-07 59.3 106 33.0
Cfa005419 Carpinus fangiana HOM05D002400 ORTHO05D002568 4.0e-07 58.9 104 36.5
FAN04G1392 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.2e-07 58.5 104 35.6
FAN04G3210 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.2e-07 58.5 64 51.6
FAN13G3133 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.8e-07 58.2 65 50.8
FAN08G3191 Fragaria x ananassa HOM05D002400 ORTHO05D045931 8.9e-07 57.8 50 54.0
FAN15G2585 Fragaria x ananassa HOM05D045789 ORTHO05D002568 8.9e-07 57.8 61 47.5
FAN15G2963 Fragaria x ananassa HOM05D045789 ORTHO05D002568 8.9e-07 57.8 61 47.5
FAN14G2111 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-06 57.4 40 60.0
Haze_04775 Corylus avellana HOM05D002400 ORTHO05D002568 1.5e-06 57.0 101 33.7
Haze_16779 Corylus avellana HOM05D002400 ORTHO05D002568 3.4e-06 55.8 102 35.3
FAN14G4031 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.6e-06 54.7 69 42.0


User provided reference genes

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