Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G105000 Prunus persica HOM05D002400 ORTHO05D002568 3.7e-82 308.1 154 100.0
RcHm_v2.0_Chr3g0474091 Rosa chinensis HOM05D002400 ORTHO05D002568 8.9e-44 180.6 153 60.1
RcHm_v2.0_Chr3g0474171 Rosa chinensis HOM05D002400 ORTHO05D002568 7.5e-43 177.6 153 59.5
MD14G1026000 Malus domestica HOM05D002400 ORTHO05D002568 2.9e-42 175.6 146 62.3
FvH4_6g33960 Fragaria vesca HOM05D002400 ORTHO05D002568 3.5e-40 168.7 153 57.5
RcHm_v2.0_Chr3g0474111 Rosa chinensis HOM05D002400 ORTHO05D002568 2.8e-37 159.1 135 58.5
RcHm_v2.0_Chr3g0475381 Rosa chinensis HOM05D002400 ORTHO05D002568 3.1e-36 155.6 138 58.0
MD14G1026300 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-35 153.7 142 60.6
RcHm_v2.0_Chr3g0475391 Rosa chinensis HOM05D002400 ORTHO05D002568 5.8e-35 151.4 144 54.9
MD14G1024100 Malus domestica HOM05D002400 ORTHO05D002568 7.6e-35 151.0 150 52.7
MD14G1026600 Malus domestica HOM05D002400 ORTHO05D002568 2.2e-34 149.4 138 56.5
MD14G1026400 Malus domestica HOM05D002400 ORTHO05D002568 3.2e-33 145.6 142 58.5
RcHm_v2.0_Chr3g0474191 Rosa chinensis HOM05D002400 ORTHO05D002568 6.0e-32 141.4 138 56.5
FvH4_6g33920 Fragaria vesca HOM05D002400 ORTHO05D002568 3.0e-31 139.0 142 52.1
FAN14G5626 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.0e-31 139.0 142 52.1
Prupe.7G105900 Prunus persica HOM05D002400 ORTHO05D002568 1.1e-30 137.1 136 52.2
Prupe.7G108600 Prunus persica HOM05D002400 ORTHO05D002568 1.1e-30 137.1 133 53.4
Prupe.7G105500 Prunus persica HOM05D002400 ORTHO05D002568 1.5e-30 136.7 136 50.7
MD14G1025600 Malus domestica HOM05D002400 ORTHO05D002568 2.1e-29 132.9 139 49.6
RcHm_v2.0_Chr3g0474141 Rosa chinensis HOM05D002400 ORTHO05D002568 6.2e-29 131.3 178 44.9
RcHm_v2.0_Chr7g0217271 Rosa chinensis HOM05D002400 ORTHO05D002568 6.2e-29 131.3 126 51.6
RcHm_v2.0_Chr3g0474031 Rosa chinensis HOM05D002400 ORTHO05D002568 3.1e-28 129.0 133 50.4
RcHm_v2.0_Chr3g0474001 Rosa chinensis HOM05D002400 ORTHO05D002568 1.5e-27 126.7 133 49.6
FvH4_5g26410 Fragaria vesca HOM05D002400 ORTHO05D002568 3.4e-27 125.6 133 48.9
FAN18G2424 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.4e-27 125.6 133 48.9
FvH4_5g26390 Fragaria vesca HOM05D002400 ORTHO05D002568 4.4e-27 125.2 124 50.0
MD14G1026700 Malus domestica HOM05D002400 ORTHO05D002568 5.8e-27 124.8 171 41.5
MD14G1025200 Malus domestica HOM05D002400 ORTHO05D002568 9.9e-27 124.0 133 51.1
RcHm_v2.0_Chr3g0474021 Rosa chinensis HOM05D002400 ORTHO05D002568 1.3e-26 123.6 135 48.9
FvH4_6g19020 Fragaria vesca HOM05D002400 ORTHO05D002568 2.2e-26 122.9 129 50.4
FAN05G4425 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.9e-26 122.5 129 49.6
MD04G1058800 Malus domestica HOM05D002400 ORTHO05D002568 6.4e-26 121.3 127 51.2
FAN02G4410 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.4e-26 120.9 131 50.4
FAN14G4887 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.4e-26 120.9 144 48.6
MD00G1221800 Malus domestica HOM05D002400 ORTHO05D002568 8.4e-26 120.9 128 48.4
RcHm_v2.0_Chr3g0474161 Rosa chinensis HOM05D002400 ORTHO05D002568 2.4e-25 119.4 85 65.9
FvH4_6g18954 Fragaria vesca HOM05D002400 ORTHO05D002568 3.2e-25 119.0 129 50.4
FAN09G2665 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-24 117.1 129 48.8
FvH4_6g19030 Fragaria vesca HOM05D002400 ORTHO05D002568 3.5e-24 115.5 135 45.9
FAN05G4159 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.5e-24 115.5 144 45.1
FAN09G3427 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.5e-24 115.5 140 45.0
FvH4_6g19010 Fragaria vesca HOM05D002400 ORTHO05D002568 4.6e-24 115.2 129 48.8
RcHm_v2.0_Chr3g0473911 Rosa chinensis HOM05D002400 ORTHO05D002568 6.0e-24 114.8 144 45.1
RcHm_v2.0_Chr7g0205891 Rosa chinensis HOM05D002400 ORTHO05D002568 6.0e-24 114.8 131 47.3
FAN14G2794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.3e-23 112.8 141 44.0
MD12G1026500 Malus domestica HOM05D002400 ORTHO05D002568 2.3e-23 112.8 120 49.2
FvH4_6g18920 Fragaria vesca HOM05D002400 ORTHO05D002568 3.0e-23 112.5 144 44.4
Prupe.6G311500 Prunus persica HOM05D002400 ORTHO05D002568 3.0e-23 112.5 134 47.8
FvH4_5g20530 Fragaria vesca HOM05D002400 ORTHO05D002568 5.1e-23 111.7 132 47.7
FvH4_6g22710 Fragaria vesca HOM05D002400 ORTHO05D002568 6.6e-23 111.3 133 45.1
FAN18G4571 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.6e-23 111.3 132 47.0
RcHm_v2.0_Chr3g0473961 Rosa chinensis HOM05D002400 ORTHO05D002568 6.6e-23 111.3 148 43.9
FAN02G2515 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.7e-23 110.9 134 44.8
FAN05G0221 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.7e-23 110.9 141 42.6
FAN14G5260 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-22 110.5 141 43.3
RcHm_v2.0_Chr3g0474041 Rosa chinensis HOM05D002400 ORTHO05D002568 1.1e-22 110.5 134 48.5
FAN02G2106 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-22 110.2 129 46.5
FAN08G1360 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-22 110.2 141 45.4
FAN09G1471 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-22 110.2 129 48.1
FAN14G2096 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-22 109.8 134 45.5
Prupe.2G052100 Prunus persica HOM05D002400 ORTHO05D002568 1.9e-22 109.8 129 47.3
Prupe.7G104800 Prunus persica HOM05D002400 ORTHO05D002568 2.5e-22 109.4 135 48.9
FAN14G3084 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.3e-22 109.0 122 49.2
FAN18G1895 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.3e-22 109.0 124 49.2
MD14G1025300 Malus domestica HOM05D002400 ORTHO05D002568 5.6e-22 108.2 136 45.6
MD12G1202000 Malus domestica HOM05D002400 ORTHO05D002568 7.3e-22 107.8 132 47.0
RcHm_v2.0_Chr7g0205961 Rosa chinensis HOM05D002400 ORTHO05D002568 7.3e-22 107.8 141 44.7
FvH4_6g19040 Fragaria vesca HOM05D002400 ORTHO05D002568 9.6e-22 107.5 137 46.0
Prupe.7G106200 Prunus persica HOM05D002400 ORTHO05D002568 9.6e-22 107.5 112 50.0
MD12G1201900 Malus domestica HOM05D002400 ORTHO05D002568 1.3e-21 107.1 143 44.1
Prupe.7G106400 Prunus persica HOM05D002400 ORTHO05D002568 2.1e-21 106.3 140 46.4
FAN18G0377 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.6e-21 105.5 141 45.4
MD14G1025400 Malus domestica HOM05D002400 ORTHO05D002568 3.6e-21 105.5 136 45.6
FvH4_6g18950 Fragaria vesca HOM05D002400 ORTHO05D002568 4.0e-20 102.1 139 38.1
FvH4_5g32301 Fragaria vesca HOM05D002400 ORTHO05D002568 5.3e-20 101.7 142 43.7
MD12G1026800 Malus domestica HOM05D002400 ORTHO05D002568 5.3e-20 101.7 132 42.4
FAN18G0208 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.0e-20 100.9 149 42.3
RcHm_v2.0_Chr3g0458171 Rosa chinensis HOM05D002400 ORTHO05D002568 9.0e-20 100.9 139 42.4
FAN14G4031 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-19 100.5 97 50.5
FvH4_6g33902 Fragaria vesca HOM05D002400 ORTHO05D002568 1.5e-19 100.1 139 41.0
FAN06G0647 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-19 100.1 147 41.5
MD14G1025100 Malus domestica HOM05D002400 ORTHO05D002568 1.5e-19 100.1 126 43.7
FAN05G1596 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.6e-19 99.4 131 42.7
FAN02G3141 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.4e-19 99.0 135 42.2
vmacro12123 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 3.4e-19 99.0 137 38.7
FvH4_6g08300 Fragaria vesca HOM05D002400 ORTHO05D002568 4.4e-19 98.6 131 42.7
FAN14G3017 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.4e-19 98.6 131 42.7
FAN06G2837 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.6e-19 97.8 135 43.7
FAN09G1480 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.6e-19 97.8 131 42.7
MD14G1026200 Malus domestica HOM05D002400 ORTHO05D002568 7.6e-19 97.8 89 58.4
FvH4_6g19361 Fragaria vesca HOM05D002400 ORTHO05D002568 9.9e-19 97.4 142 41.5
FAN05G1326 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-18 97.1 139 37.4
Prupe.1G551800 Prunus persica HOM05D002400 ORTHO05D002568 1.3e-18 97.1 134 44.0
FAN08G0492 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.7e-18 96.7 99 51.5
MD14G1025800 Malus domestica HOM05D002400 ORTHO05D002568 2.2e-18 96.3 137 42.3
FvH4_7g12363 Fragaria vesca HOM05D002400 ORTHO05D002568 2.9e-18 95.9 117 46.2
FAN04G1411 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.9e-18 95.1 135 42.2
vmacro05682 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 4.9e-18 95.1 133 39.1
FvH4_6g18982 Fragaria vesca HOM05D002400 ORTHO05D002568 8.4e-18 94.4 143 43.4
FAN14G5714 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.4e-18 94.4 142 40.8
RcHm_v2.0_Chr1g0330111 Rosa chinensis HOM05D002400 ORTHO05D002568 1.9e-17 93.2 136 42.6
RcHm_v2.0_Chr5g0069001 Rosa chinensis HOM05D002400 ORTHO05D002568 2.4e-17 92.8 191 35.1
MD12G1217800 Malus domestica HOM05D002400 ORTHO05D002568 3.2e-17 92.4 143 39.2
MD14G1024900 Malus domestica HOM05D002400 ORTHO05D002568 5.4e-17 91.7 130 43.1
FvH4_6g18952 Fragaria vesca HOM05D002400 ORTHO05D002568 7.1e-17 91.3 132 38.6
RcHm_v2.0_Chr3g0474131 Rosa chinensis HOM05D002400 ORTHO05D002568 7.1e-17 91.3 80 58.8
FvH4_6g19051 Fragaria vesca HOM05D002400 ORTHO05D002568 9.3e-17 90.9 136 40.4
RcHm_v2.0_Chr5g0068981 Rosa chinensis HOM05D002400 ORTHO05D002568 1.2e-16 90.5 171 35.1
FAN14G5775 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-16 90.1 122 41.8
FAN18G0503 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-16 90.1 86 52.3
FvH4_1g23521 Fragaria vesca HOM05D002400 ORTHO05D002568 2.1e-16 89.7 136 37.5
MD12G1217700 Malus domestica HOM05D002400 ORTHO05D002568 2.1e-16 89.7 144 39.6
FAN06G5021 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.7e-16 89.4 109 45.9
Prupe.5G196300 Prunus persica HOM05D002400 ORTHO05D002568 2.7e-16 89.4 84 48.8
FvH4_6g05280 Fragaria vesca HOM05D002400 ORTHO05D002568 4.6e-16 88.6 146 40.4
FvH4_6g19370 Fragaria vesca HOM05D002400 ORTHO05D002568 4.6e-16 88.6 115 42.6
FAN14G3389 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.6e-16 88.6 146 40.4
FAN04G0043 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.9e-16 87.8 112 44.6
FAN05G1294 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.9e-16 87.8 106 43.4
MD14G1157200 Malus domestica HOM05D002400 ORTHO05D002568 1.0e-15 87.4 137 42.3
FvH4_7g04740 Fragaria vesca HOM05D002400 ORTHO05D002568 1.3e-15 87.0 129 41.9
FAN06G1414 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-15 87.0 129 41.9
FAN14G5637 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.7e-15 86.7 146 39.7
FAN03G0307 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.3e-15 86.3 133 39.8
Prupe.6G269600 Prunus persica HOM05D002400 ORTHO05D002568 2.3e-15 86.3 103 46.6
FvH4_6g18911 Fragaria vesca HOM05D002400 ORTHO05D002568 3.0e-15 85.9 136 36.8
MD04G1145900 Malus domestica HOM05D002400 ORTHO05D002568 3.0e-15 85.9 102 50.0
MD12G1025400 Malus domestica HOM05D002400 ORTHO05D002568 3.0e-15 85.9 133 39.8
MD04G1145400 Malus domestica HOM05D002400 ORTHO05D002568 3.9e-15 85.5 134 38.8
FAN05G2337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.1e-15 85.1 147 38.8
FAN05G2917 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.6e-15 84.7 149 35.6
RcHm_v2.0_Chr3g0481121 Rosa chinensis HOM05D002400 ORTHO05D002568 1.1e-14 84.0 137 38.7
FAN09G4054 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-14 83.6 118 43.2
FAN18G0337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.5e-14 82.8 148 37.8
FvH4_6g19090 Fragaria vesca HOM05D002400 ORTHO05D002568 3.3e-14 82.4 130 42.3
FAN08G3505 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.6e-14 81.6 115 43.5
MD04G1145500 Malus domestica HOM05D002400 ORTHO05D002568 5.6e-14 81.6 158 38.6
FvH4_5g29160 Fragaria vesca HOM05D002400 ORTHO05D002568 7.3e-14 81.3 148 37.8
FAN04G1392 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.6e-13 79.0 148 37.2
FAN06G4070 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.6e-13 79.0 129 40.3
FAN14G5794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.6e-13 79.0 81 53.1
vmacro12117 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 6.2e-13 78.2 80 51.2
FvH4_7g09171 Fragaria vesca HOM05D000003 ORTHO05D002568 8.1e-13 77.8 76 55.3
RcHm_v2.0_Chr3g0474181 Rosa chinensis HOM05D002400 ORTHO05D002568 1.1e-12 77.4 70 57.1
FAN04G2586 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-12 76.6 100 44.0
MD02G1269000 Malus domestica HOM05D002400 ORTHO05D002568 1.8e-12 76.6 80 53.8
Dinv05457 Davidia involucrata HOM05D002400 ORTHO05D002568 2.4e-12 76.3 142 36.6
FAN19G0352 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-12 75.9 149 33.6
FAN05G2957 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.9e-12 74.7 65 55.4
FAN09G3087 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.5e-11 72.0 98 38.8
COL.COLO4_29802 Corchorus olitorius HOM05D002400 ORTHO05D002568 5.8e-11 71.6 107 42.1
FvH4_6g18961 Fragaria vesca HOM05D002400 ORTHO05D002568 9.9e-11 70.9 100 39.0
FAN09G0521 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.9e-11 70.9 125 36.8
FAN05G0305 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.2e-10 69.7 104 39.4
Dinv02723 Davidia involucrata HOM05D002400 ORTHO05D002568 2.9e-10 69.3 141 35.5
FAN13G2944 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.9e-10 68.6 115 40.9
FAN26G2620 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-09 66.6 63 60.3
Cfa005421 Carpinus fangiana HOM05D002400 ORTHO05D002568 7.1e-09 64.7 139 33.1
FAN10G1459 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.3e-09 64.3 99 39.4
Haze_04775 Corylus avellana HOM05D002400 ORTHO05D002568 1.6e-08 63.5 140 33.6
FAN13G3133 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-08 63.5 79 41.8
Cfa005419 Carpinus fangiana HOM05D002400 ORTHO05D002568 2.1e-08 63.2 133 33.1
Haze_16779 Corylus avellana HOM05D002400 ORTHO05D002568 2.7e-08 62.8 148 32.4
QL02p059625 Quercus lobata HOM05D002400 ORTHO05D002568 2.7e-08 62.8 80 43.8
FAN08G1320 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.5e-08 62.4 87 44.8
vmacro05683 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 3.5e-08 62.4 144 31.9
FAN15G2585 Fragaria x ananassa HOM05D045789 ORTHO05D002568 6.0e-08 61.6 57 54.4
FAN15G2963 Fragaria x ananassa HOM05D045789 ORTHO05D002568 6.0e-08 61.6 57 54.4
Dinv02727 Davidia involucrata HOM05D002400 ORTHO05D002568 1.3e-07 60.5 149 31.5
Cfa005420 Carpinus fangiana HOM05D002400 ORTHO05D002568 1.1e-06 57.4 118 33.9
Dinv05456 Davidia involucrata HOM05D002400 ORTHO05D002568 1.1e-06 57.4 149 30.9
Haze_24215 Corylus avellana HOM05D002400 ORTHO05D002568 1.5e-06 57.0 138 30.4
Haze_24470 Corylus avellana HOM05D002400 ORTHO05D002568 1.9e-06 56.6 130 33.1
MD15G1012200 Malus domestica HOM05D002400 ORTHO05D002568 2.5e-06 56.2 108 38.9
Dinv28036 Davidia involucrata HOM05D002400 ORTHO05D002568 5.6e-06 55.1 126 33.3
FvH4_5g20611 Fragaria vesca HOM05D002400 ORTHO05D002568 5.6e-06 55.1 71 43.7
FAN04G3210 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.6e-06 54.3 83 41.0


User provided reference genes

Program Settings