Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 2.1e-109 399.1 200 100.0
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 7.9e-69 264.2 185 74.1
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 6.7e-68 261.2 200 70.5
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.2e-64 250.4 199 68.3
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 2.8e-58 229.2 196 64.3
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 3.1e-57 225.7 183 66.1
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 5.3e-57 224.9 191 64.9
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 2.7e-56 222.6 142 77.5
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 5.9e-56 221.5 202 61.4
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.3e-55 220.3 181 64.6
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.7e-55 219.9 178 64.6
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.7e-55 219.9 192 62.5
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.5e-54 216.9 178 65.2
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 2.5e-54 216.1 148 71.6
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 5.5e-54 214.9 153 74.5
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.2e-53 213.8 203 59.6
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.6e-53 213.4 203 59.6
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 2.7e-53 212.6 203 59.1
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 6.1e-53 211.5 188 62.2
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 6.1e-53 211.5 139 74.8
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 6.1e-53 211.5 183 62.3
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 6.1e-53 211.5 177 64.4
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 8.0e-53 211.1 147 73.5
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 8.0e-53 211.1 151 71.5
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.4e-52 210.3 133 77.4
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.4e-52 210.3 153 69.3
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 2.3e-52 209.5 136 75.7
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 3.4e-51 205.7 153 66.7
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 5.7e-51 204.9 173 65.3
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 5.7e-51 204.9 173 65.3
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.3e-50 203.8 148 70.9
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.3e-50 203.8 179 59.8
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 1.7e-50 203.4 173 61.8
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.2e-50 203.0 185 60.0
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 2.8e-50 202.6 182 62.1
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 4.8e-50 201.8 177 61.0
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 2.4e-49 199.5 181 60.8
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 5.4e-49 198.4 138 73.2
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 9.1e-49 197.6 183 61.2
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.6e-48 196.8 184 59.8
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 2.0e-48 196.4 199 56.8
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 2.7e-48 196.1 114 83.3
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 3.5e-48 195.7 122 77.0
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 5.9e-48 194.9 139 72.7
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 7.7e-48 194.5 201 53.2
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 1.7e-47 193.4 139 69.8
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 1.7e-47 193.4 187 58.3
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.7e-47 193.4 179 62.6
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 2.3e-47 193.0 202 55.9
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 2.9e-47 192.6 175 59.4
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 1.1e-46 190.7 140 65.7
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.9e-46 189.9 147 66.7
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 2.5e-46 189.5 131 67.9
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 1.2e-45 187.2 114 80.7
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 2.1e-45 186.4 187 56.7
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 2.8e-45 186.0 140 62.9
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 4.7e-45 185.3 136 67.6
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 3.0e-44 182.6 204 53.9
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.0e-44 182.6 122 70.5
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 6.8e-44 181.4 137 65.7
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 6.8e-44 181.4 188 56.4
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 8.9e-44 181.0 193 56.0
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 1.5e-43 180.3 130 71.5
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 2.6e-43 179.5 182 58.2
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 2.6e-43 179.5 184 56.5
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 2.6e-43 179.5 184 56.5
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 3.4e-43 179.1 122 72.1
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.2e-42 176.4 172 55.8
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.7e-42 175.6 121 71.1
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 4.9e-42 175.3 125 68.8
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 4.9e-42 175.3 125 68.8
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 8.3e-42 174.5 125 68.8
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 1.1e-41 174.1 124 69.4
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 1.1e-41 174.1 124 69.4
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 1.8e-41 173.3 122 72.1
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 2.4e-41 172.9 125 68.8
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 3.1e-41 172.6 124 70.2
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 4.1e-41 172.2 124 67.7
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 1.2e-40 170.6 124 69.4
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 1.2e-40 170.6 124 71.8
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.0e-39 167.5 123 67.5
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 1.0e-39 167.5 121 69.4
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.0e-39 167.5 193 53.4
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 2.9e-39 166.0 152 56.6
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 3.8e-39 165.6 138 63.8
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 8.6e-39 164.5 123 69.9
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 3.3e-38 162.5 182 52.2
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 2.3e-36 156.4 183 53.6
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 2.3e-36 156.4 183 53.6
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 1.2e-35 154.1 188 50.0
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 1.5e-35 153.7 127 63.0
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 7.5e-35 151.4 195 50.3
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 9.8e-35 151.0 137 56.2
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 5.0e-31 138.7 132 53.0
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 1.1e-30 137.5 81 84.0
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 3.3e-30 136.0 81 82.7
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 6.2e-29 131.7 118 55.9
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 8.0e-29 131.3 129 52.7
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 4.0e-28 129.0 80 81.2
MD14G1029800 Malus domestica HOM05D007282 ORTHO05D009214 3.2e-25 119.4 110 62.7
MD12G1029500 Malus domestica HOM05D007282 ORTHO05D009214 3.9e-23 112.5 97 68.0
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 4.3e-22 109.0 94 59.6
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.2e-21 107.5 94 58.5
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 7.5e-19 98.2 80 62.5
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 9.9e-11 71.2 53 66.0
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 3.2e-09 66.2 52 63.5
PRCOL_00001877 Prasinoderma coloniale HOM05D007282 ORTHO05D009214 1.1e-06 57.8 128 32.0
PRCOL_00005178 Prasinoderma coloniale HOM05D007282 ORTHO05D049198 2.5e-06 56.6 153 29.4


User provided reference genes

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