Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G097300 Prunus persica HOM05D007532 ORTHO05D009483 4.2e-81 304.7 158 100.0
MD14G1037100 Malus domestica HOM05D007532 ORTHO05D009483 6.5e-50 201.1 158 72.8
Prupe.2G218900 Prunus persica HOM05D007532 ORTHO05D009483 5.0e-42 174.9 158 68.4
FvH4_6g20110 Fragaria vesca HOM05D007532 ORTHO05D009483 2.3e-26 122.9 199 48.2
FAN14G5580 Fragaria x ananassa HOM05D007532 ORTHO05D009483 2.3e-26 122.9 199 48.2
RcHm_v2.0_Chr3g0475571 Rosa chinensis HOM05D007532 ORTHO05D009483 3.0e-26 122.5 199 47.7
FAN05G0427 Fragaria x ananassa HOM05D007532 ORTHO05D009483 1.0e-23 114.0 198 47.0
CiPaw.10G016200 Carya illinoinensis HOM05D007532 ORTHO05D009483 3.9e-18 95.5 178 42.7
Cfa016678 Carpinus fangiana HOM05D007532 ORTHO05D009483 1.5e-17 93.6 184 41.8
Haze_19695 Corylus avellana HOM05D007532 ORTHO05D009483 3.3e-17 92.4 183 40.4
Phvul.007G269000 Phaseolus vulgaris HOM05D007532 ORTHO05D009483 6.8e-15 84.7 157 40.8
Lalb_Chr02g0154541 Lupinus albus HOM05D007532 ORTHO05D009483 1.2e-14 84.0 157 42.7
Ca_11714_v3 Cicer arietinum L. HOM05D007532 ORTHO05D009483 5.8e-14 81.6 165 40.0
QL07p037073 Quercus lobata HOM05D007532 ORTHO05D009483 7.5e-14 81.3 185 36.8
TWI74G0748 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 7.5e-14 81.3 178 37.6
Manes.09G046800 Manihot esculenta HOM05D007532 ORTHO05D009483 2.9e-13 79.3 196 36.7
arahy.Tifrunner.gnm1.ann1.R0B094 Arachis hypogaea HOM05D007532 ORTHO05D009483 6.4e-13 78.2 180 40.6
arahy.Tifrunner.gnm1.ann1.U8RNVP Arachis hypogaea HOM05D007532 ORTHO05D009483 6.4e-13 78.2 180 40.6
GSVIVG01033946001 Vitis vinifera HOM05D007532 ORTHO05D009483 2.4e-12 76.3 186 37.6
TAR623G0884 Trochodendron aralioides HOM05D007532 ORTHO05D009483 4.1e-12 75.5 187 39.6
Ciclev10012763m.g Citrus clementina HOM05D007532 ORTHO05D009483 7.1e-12 74.7 183 37.2
ClCG10G018450 Citrullus lanatus HOM05D007532 ORTHO05D009483 1.2e-11 73.9 170 35.3
TWI77G0050 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 1.2e-11 73.9 177 39.5
MELO3C009524.2 Cucumis melo HOM05D007532 ORTHO05D009483 1.6e-11 73.6 179 35.8
Lj5g0000288 Lotus japonicus HOM05D007532 ORTHO05D009483 2.7e-11 72.8 168 39.9
Atru.chr8.1383 Acer truncatum HOM05D007532 ORTHO05D009483 4.6e-11 72.0 185 36.8
Cpa.g.sc104.49 Carica papaya HOM05D007532 ORTHO05D009483 7.8e-11 71.2 214 32.7
COL.COLO4_29593 Corchorus olitorius HOM05D007532 ORTHO05D009483 2.3e-10 69.7 105 43.8
Actinidia32050 Actinidia chinensis HOM05D007532 ORTHO05D009483 6.6e-10 68.2 187 35.3
Duzib093G1477 Durio zibethinus HOM05D007532 ORTHO05D009483 8.6e-10 67.8 98 44.9
Thecc.05G102000 Theobroma cacao HOM05D007532 ORTHO05D009483 1.5e-09 67.0 203 35.0
Gorai.006G150300 Gossypium raimondii HOM05D007532 ORTHO05D009483 2.5e-09 66.2 93 48.4
Medtr1g057220 Medicago truncatula HOM05D007532 ORTHO05D009483 2.5e-09 66.2 165 35.2
Gohir.D09G131700 Gossypium hirsutum HOM05D007532 ORTHO05D009483 5.6e-09 65.1 93 47.3
PGR004G2296 Punica granatum HOM05D007532 ORTHO05D009483 5.6e-09 65.1 220 29.5
Gohir.A09G135100 Gossypium hirsutum HOM05D007532 ORTHO05D009483 1.6e-08 63.5 195 33.8
Glyma.10G079300 Glycine max HOM05D007532 ORTHO05D009483 2.8e-08 62.8 170 35.3
Duzib106G1076 Durio zibethinus HOM05D007532 ORTHO05D009483 3.6e-08 62.4 97 39.2
TPR.G31864 Trifolium pratense HOM05D007532 ORTHO05D009483 3.6e-08 62.4 172 33.1
Sabra06G0157400 Salix brachista HOM05D007532 ORTHO05D009483 8.1e-08 61.2 197 33.5
Potri.016G071700 Populus trichocarpa HOM05D007532 ORTHO05D009483 1.4e-07 60.5 197 33.5
AUR62037048 Chenopodium quinoa HOM05D007532 ORTHO05D009483 1.8e-07 60.1 171 33.9
CANSAT64G0088 Cannabis sativa HOM05D007532 ORTHO05D009483 5.2e-07 58.5 198 31.3
Gohir.A04G060800 Gossypium hirsutum HOM05D007532 ORTHO05D009483 5.2e-07 58.5 182 31.3
Sed0007351 Sechium edule HOM05D007532 ORTHO05D009483 5.2e-07 58.5 154 31.8
Dinv31750 Davidia involucrata HOM05D010118 ORTHO05D009483 8.9e-07 57.8 188 34.0
Gohir.D04G094900 Gossypium hirsutum HOM05D007532 ORTHO05D009483 1.2e-06 57.4 182 31.9
Gorai.009G397600 Gossypium raimondii HOM05D007532 ORTHO05D009483 1.2e-06 57.4 182 31.9
Oeu055526.1 Olea europaea HOM05D007532 ORTHO05D009483 1.2e-06 57.4 200 28.0
Eucgr.A02598 Eucalyptus grandis HOM05D007532 ORTHO05D009483 1.5e-06 57.0 218 29.8
Actinidia04004 Actinidia chinensis HOM05D007532 ORTHO05D009483 2.0e-06 56.6 149 36.9
SalBow5G5402 Salvia bowleyana HOM05D007532 ORTHO05D009483 2.0e-06 56.6 198 29.8
AUR62006278 Chenopodium quinoa HOM05D007532 ORTHO05D009483 3.4e-06 55.8 170 34.7
DCAR_020715 Daucus carota HOM05D007532 ORTHO05D009483 9.9e-06 54.3 187 31.0
Migut.L01834 Erythranthe guttata HOM05D007532 ORTHO05D009483 9.9e-06 54.3 215 32.1


User provided reference genes

Program Settings