Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G095600 Prunus persica HOM05D015804 ORTHO05D010800 3.1e-133 478.4 232 100.0
MD12G1039600 Malus domestica HOM05D015804 ORTHO05D010800 3.3e-50 202.6 195 59.0
RcHm_v2.0_Chr3g0475841 Rosa chinensis HOM05D015804 ORTHO05D010800 1.2e-44 184.1 243 48.1
FAN14G2856 Fragaria x ananassa HOM05D015804 ORTHO05D010800 3.2e-37 159.5 239 45.2
FvH4_6g20250 Fragaria vesca HOM05D015804 ORTHO05D010800 7.1e-37 158.3 239 45.2
Manes.08G032900 Manihot esculenta HOM05D009231 ORTHO05D010800 6.0e-36 155.2 250 44.8
Haze_07057 Corylus avellana HOM05D009231 ORTHO05D010800 7.4e-34 148.3 255 42.0
Duzib093G0513 Durio zibethinus HOM05D009231 ORTHO05D010800 2.1e-33 146.7 255 39.2
FAN05G3991 Fragaria x ananassa HOM05D015804 ORTHO05D010800 2.8e-33 146.4 241 42.3
FAN02G3496 Fragaria x ananassa HOM05D015804 ORTHO05D010800 7.6e-31 138.3 241 40.2
Cfa021528 Carpinus fangiana HOM05D009231 ORTHO05D010800 1.3e-30 137.5 240 42.1
FAN09G0232 Fragaria x ananassa HOM05D015804 ORTHO05D010800 1.7e-30 137.1 241 41.5
FAN05G1852 Fragaria x ananassa HOM05D015804 ORTHO05D010800 2.2e-30 136.7 230 41.7
Thecc.05G103300 Theobroma cacao HOM05D009231 ORTHO05D010800 2.2e-30 136.7 251 39.4
Manes.09G044800 Manihot esculenta HOM05D009231 ORTHO05D010800 2.9e-30 136.3 250 40.8
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 5.5e-29 132.1 253 39.9
TAR636G0160 Trochodendron aralioides HOM05D009231 ORTHO05D010800 6.7e-27 125.2 242 38.4
QL07p036848 Quercus lobata HOM05D009231 ORTHO05D010800 8.7e-27 124.8 258 39.1
Actinidia32045 Actinidia chinensis HOM05D009231 ORTHO05D010800 1.1e-26 124.4 250 37.6
Hma1.2p1_0079F.1_g041880 Hydrangea macrophylla HOM05D009231 ORTHO05D010800 1.1e-26 124.4 263 36.1
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 1.1e-26 124.4 267 36.7
Actinidia03894 Actinidia chinensis HOM05D009231 ORTHO05D010800 9.7e-26 121.3 248 36.3
Gohir.A01G201800 Gossypium hirsutum HOM05D009231 ORTHO05D010800 2.8e-25 119.8 246 36.6
Gorai.002G235600 Gossypium raimondii HOM05D009231 ORTHO05D010800 1.8e-24 117.1 242 39.3
Cpa.g.sc104.38 Carica papaya HOM05D009231 ORTHO05D010800 6.9e-24 115.2 264 34.1
TAR633G1440 Trochodendron aralioides HOM05D009231 ORTHO05D010800 4.5e-23 112.5 274 32.8
Potri.006G203800 Populus trichocarpa HOM05D009231 ORTHO05D010800 2.5e-21 106.7 235 37.4
Gohir.D01G191700 Gossypium hirsutum HOM05D009231 ORTHO05D010800 1.1e-18 97.8 195 40.0
Dinv31754 Davidia involucrata HOM05D009231 ORTHO05D010800 7.4e-18 95.1 171 39.2
PGR142G1154 Punica granatum HOM05D009231 ORTHO05D010800 1.2e-15 87.8 254 32.3
Nn6g34706 Nelumbo nucifera HOM05D009231 ORTHO05D010800 1.5e-15 87.4 199 34.2
COL.COLO4_29583 Corchorus olitorius HOM05D009231 ORTHO05D010800 1.4e-13 80.9 158 41.1
Nn2g14291 Nelumbo nucifera HOM05D009231 ORTHO05D010800 3.6e-12 76.3 201 34.3
Aqoxy1G00673 Aquilegia oxysepala HOM05D009231 ORTHO05D010800 3.0e-11 73.2 269 29.4
Oeu052622.2 Olea europaea HOM05D022101 ORTHO05D022209 1.5e-10 70.9 202 33.7
Sc20g0006710 Simmondsia chinensis HOM05D009231 ORTHO05D010800 3.1e-08 63.2 236 26.3
ATR0772G209 Amborella trichopoda HOM05D009231 ORTHO05D010800 4.1e-08 62.8 257 30.0
CDE08G0923 Ceratophyllum demersum HOM05D009231 ORTHO05D010800 5.3e-08 62.4 185 30.3
Nitab4.5_0002958g0010 Nicotiana tabacum HOM05D019826 ORTHO05D022411 7.0e-08 62.0 234 30.8
Duzib106G2060 Durio zibethinus HOM05D009231 ORTHO05D010800 2.0e-07 60.5 136 35.3
Dinv08588 Davidia involucrata HOM05D030328 ORTHO05D026420 2.6e-07 60.1 196 31.1
Hund03818 Selenicereus undatus HOM05D009231 ORTHO05D010800 2.9e-06 56.6 259 25.9


User provided reference genes

Program Settings