Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 4.2e-128 461.5 245 100.0
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 5.7e-93 344.7 238 74.4
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 1.5e-82 310.1 238 68.9
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 2.2e-65 253.1 238 60.9
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.9e-65 252.7 238 60.5
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.0e-65 251.9 238 60.5
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.9e-64 250.0 238 60.5
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.6e-63 246.9 238 59.2
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 4.7e-63 245.4 238 59.7
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 2.7e-58 229.6 247 57.5
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 1.3e-57 227.3 251 54.6
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 3.2e-56 222.6 246 52.0
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 7.2e-56 221.5 246 53.3
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 3.0e-54 216.1 250 50.8
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 1.3e-52 210.7 240 47.5
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 7.8e-50 201.4 248 46.8
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 1.1e-48 197.6 247 47.8
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 7.3e-48 194.9 238 45.8
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 2.1e-47 193.4 246 45.1
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 3.6e-47 192.6 238 46.2
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 3.6e-47 192.6 235 46.0
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 4.7e-47 192.2 257 47.9
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 9.8e-45 184.5 249 47.8
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 1.6e-42 177.2 245 44.9
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 1.6e-39 167.2 255 43.5
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 4.7e-39 165.6 242 41.7
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 4.7e-39 165.6 267 42.3
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.3e-38 163.3 259 42.5
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 4.0e-38 162.5 244 42.2
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 5.2e-38 162.2 271 41.3
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 2.9e-36 156.4 246 39.8
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 3.7e-36 156.0 243 40.7
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 6.4e-36 155.2 261 38.3
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 8.3e-36 154.8 257 39.7
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 1.9e-35 153.7 241 39.4
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 9.2e-35 151.4 247 41.3
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.6e-34 150.6 247 40.5
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 1.3e-33 147.5 241 40.2
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 1.7e-33 147.1 234 40.2
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 1.7e-33 147.1 247 39.3
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 1.4e-30 137.5 251 36.3
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 8.9e-30 134.8 236 36.4
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 7.5e-29 131.7 230 38.3
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 9.9e-29 131.3 256 34.0
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 6.4e-28 128.6 262 34.7
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 6.4e-28 128.6 260 35.0
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 8.3e-28 128.3 260 35.0
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 1.4e-27 127.5 281 33.5
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.9e-27 127.1 253 36.0
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 1.9e-27 127.1 269 33.1
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 2.4e-27 126.7 269 33.1
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 2.1e-26 123.6 254 35.4
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 2.7e-26 123.2 283 33.9
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 3.5e-26 122.9 241 34.0
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 4.6e-26 122.5 249 34.5
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 1.7e-25 120.6 271 37.3
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 2.3e-25 120.2 245 34.7
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 2.3e-25 120.2 293 32.1
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 1.1e-24 117.9 251 34.7
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 1.9e-24 117.1 250 32.8
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.9e-24 117.1 263 33.8
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 3.3e-24 116.3 236 32.2
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 3.3e-24 116.3 258 34.5
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 4.3e-24 115.9 235 32.8
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 5.6e-24 115.5 257 33.9
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 1.2e-23 114.4 239 31.8
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 2.1e-23 113.6 263 33.8
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 3.6e-23 112.8 269 32.0
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 4.7e-23 112.5 250 35.6
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 6.2e-23 112.1 109 54.1
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 8.1e-23 111.7 238 30.7
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 1.8e-22 110.5 173 38.7
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 3.1e-22 109.8 239 33.1
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 4.0e-22 109.4 251 35.1
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 1.5e-21 107.5 275 28.7
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 2.0e-21 107.1 263 32.3
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 2.6e-21 106.7 246 32.9
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 4.4e-21 105.9 234 35.0
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 2.2e-20 103.6 270 30.7
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 3.2e-19 99.8 235 33.2
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 5.4e-19 99.0 240 33.8
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 9.2e-19 98.2 244 33.2
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 9.2e-19 98.2 252 29.0
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.7e-18 96.7 116 50.0
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 4.6e-18 95.9 231 31.6
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 7.8e-18 95.1 241 32.4
Os04g0685700 Oryza sativa ssp. japonica HOM05D007097 ORTHO05D008131 1.0e-17 94.7 249 28.9
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 5.1e-17 92.4 259 28.2
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.5e-16 90.9 97 56.7
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 5.6e-16 89.0 245 30.2
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 1.2e-15 87.8 206 32.0
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 2.4e-14 83.6 110 46.4
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 9.0e-14 81.6 250 30.8
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 1.2e-13 81.3 257 30.0
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 3.8e-12 76.3 247 28.3
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 2.1e-10 70.5 109 39.4
ECA233G1347 Erigeron canadensis HOM05D007097 ORTHO05D008131 4.6e-10 69.3 248 25.0
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 1.0e-09 68.2 75 49.3
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 6.6e-09 65.5 127 32.3
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 1.5e-08 64.3 117 33.3
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 3.3e-08 63.2 135 34.1
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 7.3e-08 62.0 141 30.5
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 4.0e-06 56.2 49 55.1


User provided reference genes

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