Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 2.2e-146 522.3 269 100.0
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 1.0e-111 407.1 269 79.9
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 3.0e-111 405.6 269 79.9
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 1.6e-93 346.7 270 71.9
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 1.3e-85 320.5 275 65.8
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 6.2e-85 318.2 268 69.0
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.1e-84 317.4 261 68.2
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 1.8e-84 316.6 267 64.8
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 5.3e-84 315.1 269 69.1
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 5.3e-84 315.1 267 67.0
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 6.9e-84 314.7 266 67.3
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 3.4e-83 312.4 266 65.0
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 1.1e-81 307.4 272 62.9
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 1.8e-79 300.1 277 63.9
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 4.3e-78 295.4 273 59.7
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 5.7e-78 295.0 273 64.8
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 3.7e-77 292.4 264 60.6
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 1.5e-75 287.0 275 64.0
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 1.5e-75 287.0 269 62.1
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 2.0e-75 286.6 271 60.9
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 3.4e-75 285.8 274 59.1
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 1.7e-74 283.5 277 61.0
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 2.2e-74 283.1 275 58.9
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 1.1e-73 280.8 267 58.8
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 1.4e-73 280.4 203 72.4
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 1.9e-73 280.0 270 59.3
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 2.5e-73 279.6 276 56.5
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 7.2e-73 278.1 275 58.2
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 9.3e-73 277.7 278 61.2
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 9.3e-73 277.7 274 59.1
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 2.7e-72 276.2 204 66.7
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 4.6e-72 275.4 270 58.5
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 3.0e-71 272.7 278 57.2
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 3.0e-71 272.7 272 57.0
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 3.9e-71 272.3 207 69.6
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 3.9e-71 272.3 200 69.0
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 6.7e-71 271.6 263 57.8
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 8.7e-71 271.2 273 57.1
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 8.7e-71 271.2 270 56.7
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 1.1e-70 270.8 209 69.9
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 1.1e-70 270.8 192 72.9
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 1.5e-70 270.4 215 68.4
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 1.9e-70 270.0 206 66.5
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 5.7e-70 268.5 212 64.2
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 1.3e-69 267.3 191 71.7
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 1.3e-69 267.3 273 55.7
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 2.2e-69 266.5 282 55.0
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 6.3e-69 265.0 207 67.6
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 6.3e-69 265.0 234 62.0
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 1.1e-68 264.2 272 57.7
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 1.1e-68 264.2 178 76.4
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 1.4e-68 263.8 234 62.0
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 1.8e-68 263.5 234 62.0
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 2.4e-68 263.1 196 67.9
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 1.5e-67 260.4 213 64.3
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 3.4e-67 259.2 269 55.0
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 7.7e-67 258.1 271 53.1
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 6.5e-66 255.0 201 67.2
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 6.5e-66 255.0 265 55.8
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 1.1e-65 254.2 203 65.0
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 1.4e-65 253.8 268 54.9
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 4.2e-65 252.3 266 55.6
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 7.2e-65 251.5 267 54.3
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 2.1e-64 250.0 273 52.7
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 2.1e-64 250.0 209 63.2
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 2.7e-64 249.6 266 51.1
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 2.7e-64 249.6 266 54.9
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 4.6e-64 248.8 271 51.3
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 6.1e-64 248.4 254 55.1
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 6.1e-64 248.4 206 61.2
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 7.9e-64 248.1 273 52.0
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 1.0e-63 247.7 291 50.5
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 1.4e-63 247.3 270 53.3
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 3.0e-63 246.1 269 52.8
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 5.1e-63 245.4 268 54.1
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 2.0e-62 243.4 277 54.2
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 7.4e-62 241.5 214 60.3
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 7.4e-62 241.5 286 51.7
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 1.3e-61 240.7 208 57.2
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.8e-61 239.6 267 54.3
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 4.8e-61 238.8 271 50.6
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 1.1e-60 237.7 273 52.0
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 1.1e-60 237.7 320 47.5
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 1.8e-60 236.9 216 62.5
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 2.4e-60 236.5 201 59.7
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 4.1e-60 235.7 250 51.6
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 1.2e-59 234.2 198 62.1
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 1.2e-59 234.2 231 60.2
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 6.5e-58 228.4 274 51.8
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 1.1e-57 227.6 206 58.7
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 2.5e-57 226.5 144 81.9
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 3.6e-56 222.6 192 59.4
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 1.4e-55 220.7 154 77.3
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 3.0e-55 219.5 307 48.2
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 1.7e-53 213.8 167 65.3
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 5.9e-51 205.3 249 51.0
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 5.9e-51 205.3 203 52.2
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 1.1e-49 201.1 153 69.9
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 1.9e-49 200.3 177 62.1
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 9.4e-49 198.0 154 66.9
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 5.7e-46 188.7 177 59.9
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.3e-45 187.6 184 53.3
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 2.8e-45 186.4 182 53.8
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 6.3e-45 185.3 141 68.1
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 8.2e-45 184.9 200 53.0
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 1.5e-41 174.1 202 50.5
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 1.6e-40 170.6 190 46.3
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 1.6e-40 170.6 201 45.8
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 1.7e-37 160.6 271 45.4
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.5e-33 147.5 113 66.4
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 1.8e-31 140.6 213 39.0
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 2.8e-29 133.3 206 39.8
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 3.4e-22 109.8 108 50.0
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 1.8e-20 104.0 87 64.4
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 7.0e-20 102.1 179 35.8
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 7.0e-20 102.1 179 35.8
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 4.6e-19 99.4 123 39.8
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 1.7e-18 97.4 110 50.9
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 8.9e-15 85.1 100 53.0
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 7.5e-14 82.0 220 29.1
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 9.8e-14 81.6 164 32.9
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 1.2e-11 74.7 103 44.7
Lj3C241T8 Lonicera japonica HOM05D001890 ORTHO05D008163 8.9e-07 58.5 120 40.0


User provided reference genes

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