Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 7.1e-154 547.4 301 100.0
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 1.5e-119 433.3 304 83.9
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 1.4e-98 363.6 302 74.8
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 7.2e-98 361.3 303 72.9
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 1.4e-85 320.5 282 70.2
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 8.5e-83 311.2 272 71.0
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.2e-73 280.8 326 54.3
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 4.7e-73 278.9 323 53.3
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.2e-71 274.2 308 52.6
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 2.6e-71 273.1 314 52.2
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 4.4e-71 272.3 327 56.0
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 5.7e-71 271.9 322 50.6
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 1.7e-70 270.4 304 53.6
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 8.3e-70 268.1 322 51.9
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.4e-69 267.3 310 51.9
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 9.2e-69 264.6 313 52.1
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 9.2e-69 264.6 318 52.2
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 1.6e-68 263.8 324 52.2
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 1.7e-67 260.4 317 48.6
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 2.9e-67 259.6 303 50.8
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 2.9e-67 259.6 316 49.1
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 5.0e-67 258.8 324 54.0
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 1.1e-66 257.7 316 49.4
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 1.5e-66 257.3 313 48.6
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 1.2e-65 254.2 312 54.8
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 1.8e-64 250.4 328 48.5
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 1.8e-64 250.4 375 44.5
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 3.0e-64 249.6 326 48.5
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 8.9e-64 248.1 326 48.2
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 8.3e-62 241.5 307 51.8
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 1.4e-61 240.7 328 48.8
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 3.2e-61 239.6 320 48.1
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 1.2e-60 237.7 308 48.1
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 2.0e-60 236.9 275 54.2
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 1.0e-59 234.6 331 46.5
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.7e-59 233.8 323 46.4
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 1.7e-59 233.8 342 45.6
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 2.5e-58 229.9 319 46.4
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 2.5e-58 229.9 304 48.7
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 4.3e-58 229.2 325 47.7
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 4.3e-58 229.2 332 45.5
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 5.6e-58 228.8 318 48.1
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 7.3e-58 228.4 320 45.3
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 9.5e-58 228.0 318 46.2
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 9.5e-58 228.0 325 44.3
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 1.6e-57 227.3 327 46.5
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 1.8e-56 223.8 306 46.4
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 2.3e-56 223.4 327 46.2
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 3.1e-56 223.0 334 43.1
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 6.8e-56 221.9 317 44.8
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 1.5e-55 220.7 312 43.9
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 2.6e-55 219.9 386 40.4
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 3.4e-55 219.5 311 45.0
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 7.5e-55 218.4 311 44.7
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 1.7e-54 217.2 304 48.0
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 2.2e-54 216.9 310 46.1
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 2.9e-54 216.5 290 47.2
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 3.2e-53 213.0 370 42.4
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 3.2e-53 213.0 309 49.8
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 7.0e-53 211.8 251 54.2
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 9.2e-53 211.5 284 47.5
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 2.1e-52 210.3 266 51.1
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 2.1e-52 210.3 309 45.0
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 2.7e-52 209.9 309 45.0
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 4.6e-52 209.1 308 45.1
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 1.7e-51 207.2 286 46.9
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 3.9e-51 206.1 303 44.9
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 8.6e-51 204.9 317 42.6
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 1.1e-50 204.5 301 45.8
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 3.6e-49 199.5 311 43.1
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 8.9e-48 194.9 310 41.6
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 1.3e-46 191.0 253 46.6
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 3.7e-46 189.5 337 40.9
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 4.6e-44 182.6 113 85.0
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 3.9e-43 179.5 316 39.9
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 1.9e-42 177.2 310 42.6
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 3.3e-42 176.4 257 45.9
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 3.6e-41 172.9 306 41.8
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 1.4e-40 171.0 273 43.2
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 1.4e-40 171.0 254 47.2
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.2e-39 167.9 275 41.8
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.2e-39 167.9 303 41.6
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.1e-37 161.4 242 43.4
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 1.3e-35 154.5 242 43.0
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 1.2e-33 147.9 204 46.6
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 1.4e-32 144.4 270 40.4
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 1.8e-32 144.1 356 32.9
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.8e-32 144.1 228 47.4
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 2.2e-30 137.1 220 42.3
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 1.9e-29 134.0 367 30.8
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 1.4e-24 117.9 167 45.5
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.8e-24 117.5 157 45.2
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 2.3e-19 100.5 169 42.0
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 6.7e-19 99.0 70 67.1
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.5e-18 97.8 76 75.0
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 2.5e-18 97.1 180 43.9
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 3.3e-18 96.7 267 33.0
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 9.6e-18 95.1 102 52.0
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.7e-17 93.2 119 46.2
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 3.7e-17 93.2 97 49.5
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 1.1e-16 91.7 65 70.8
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 1.4e-16 91.3 309 28.5
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 6.0e-12 75.9 65 63.1
MD12G1047700 Malus domestica HOM05D007071 ORTHO05D008677 2.5e-10 70.5 104 47.1
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 6.2e-09 65.9 58 55.2
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 3.1e-08 63.5 41 75.6
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.3e-06 58.2 370 22.7
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 2.9e-06 57.0 295 25.1
CBR_g40815 Chara braunii HOM05D007071 ORTHO05D008677 8.4e-06 55.5 115 33.9
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 8.4e-06 55.5 48 58.3
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 8.4e-06 55.5 46 60.9


User provided reference genes

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