Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G082600 Prunus persica HOM05D004031 ORTHO05D011186 1.5e-26 122.1 60 100.0
MD12G1054200 Malus domestica HOM05D004031 ORTHO05D011186 1.2e-23 112.5 56 98.2
Potri.016G060550 Populus trichocarpa HOM05D004031 ORTHO05D011186 3.2e-21 104.4 56 83.9
Manes.09G038400 Manihot esculenta HOM05D004031 ORTHO05D011186 5.4e-21 103.6 56 85.7
GSVIVG01033459001 Vitis vinifera HOM05D004031 ORTHO05D011186 2.7e-20 101.3 56 83.9
RcHm_v2.0_Chr3g0479131 Rosa chinensis HOM05D004031 ORTHO05D011186 3.5e-20 100.9 56 85.7
CDE05G3199 Ceratophyllum demersum HOM05D004031 ORTHO05D011186 8.6e-19 96.3 56 78.6
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 1.5e-18 95.5 53 83.0
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 1.5e-18 95.5 60 75.0
CSS0013106 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D011186 2.5e-18 94.7 59 74.6
MELO3C009606.2 Cucumis melo HOM05D004031 ORTHO05D011186 2.5e-18 94.7 58 74.1
Thecc.05G176000 Theobroma cacao HOM05D004031 ORTHO05D011186 2.5e-18 94.7 56 78.6
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 2.5e-18 94.7 57 77.2
Nn7g35951 Nelumbo nucifera HOM05D004031 ORTHO05D011186 3.3e-18 94.4 54 81.5
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 4.3e-18 94.0 56 76.8
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 7.3e-18 93.2 52 82.7
Sed0024429 Sechium edule HOM05D004031 ORTHO05D011186 7.3e-18 93.2 54 79.6
Nn7g36859 Nelumbo nucifera HOM05D004031 ORTHO05D011186 1.2e-17 92.4 54 81.5
CiPaw.09G027900 Carya illinoinensis HOM05D004031 ORTHO05D011186 2.1e-17 91.7 56 76.8
Eucgr.K01857 Eucalyptus grandis HOM05D004031 ORTHO05D011186 2.1e-17 91.7 55 80.0
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 4.7e-17 90.5 52 78.8
Gohir.D01G124600 Gossypium hirsutum HOM05D004031 ORTHO05D011186 4.7e-17 90.5 56 75.0
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 1.1e-16 89.4 53 79.2
Gohir.A01G137400 Gossypium hirsutum HOM05D004031 ORTHO05D011186 1.4e-16 89.0 56 73.2
Hma1.2p1_0124F.1_g058300 Hydrangea macrophylla HOM05D004031 ORTHO05D011186 1.8e-16 88.6 55 78.2
Migut.J01860 Erythranthe guttata HOM05D004031 ORTHO05D011186 5.2e-16 87.0 58 72.4
Medtr7g093770 Medicago truncatula HOM05D004031 ORTHO05D011186 5.2e-16 87.0 54 72.2
Glyma.19G150500 Glycine max HOM05D004031 ORTHO05D011186 1.2e-15 85.9 55 74.5
Phvul.001G144800 Phaseolus vulgaris HOM05D004031 ORTHO05D011186 1.2e-15 85.9 57 70.2
Duzib128G0401 Durio zibethinus HOM05D004031 ORTHO05D011186 1.5e-15 85.5 56 69.6
Lj1g0020490 Lotus japonicus HOM05D004031 ORTHO05D011186 1.5e-15 85.5 55 67.3
Lalb_Chr15g0079141 Lupinus albus HOM05D004031 ORTHO05D011186 5.8e-15 83.6 57 68.4
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 9.8e-15 82.8 58 69.0
Aa31LG3G5450 Aethionema arabicum HOM05D004031 ORTHO05D011186 3.7e-14 80.9 58 67.2
Carub.0003s1134 Capsella rubella HOM05D004031 ORTHO05D011186 3.7e-14 80.9 58 69.0
A03p37430 Brassica napus HOM05D004031 ORTHO05D011186 4.9e-14 80.5 58 67.2
Cc06_g15560 Coffea canephora HOM05D004031 ORTHO05D011186 4.9e-14 80.5 58 72.4
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 4.9e-14 80.5 60 65.0
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 4.9e-14 80.5 60 65.0
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 6.4e-14 80.1 59 64.4
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 6.4e-14 80.1 59 64.4
Aa31LG3G5490 Aethionema arabicum HOM05D004031 ORTHO05D011186 1.1e-13 79.3 58 65.5
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 5.4e-13 77.0 59 62.7
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 7.1e-13 76.6 54 59.3
Glyma.03G147100 Glycine max HOM05D004031 ORTHO05D011186 2.1e-12 75.1 50 74.0
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 2.7e-12 74.7 60 63.3
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 3.9e-11 70.9 57 61.4
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 3.9e-11 70.9 57 61.4
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 6.6e-11 70.1 34 94.1
SEGI_01182 Sequoiadendron giganteum HOM05D004031 ORTHO05D011186 3.6e-09 64.3 35 82.9
Hund06156 Selenicereus undatus HOM05D000159 ORTHO05D011186 2.3e-08 61.6 36 72.2
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 3.1e-08 61.2 37 75.7
SHI31744 Sapria himalayana HOM05D004031 ORTHO05D011186 8.9e-08 59.7 37 67.6
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.5e-07 58.9 35 71.4
Sed0004834 Sechium edule HOM05D004031 ORTHO05D011186 2.0e-07 58.5 58 55.2
Mapoly0005s0168 Marchantia polymorpha HOM05D004031 ORTHO05D011186 3.4e-07 57.8 51 47.1


User provided reference genes

Program Settings