Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 5.7e-187 657.5 354 100.0
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 7.7e-176 620.5 354 86.2
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 1.9e-174 615.9 354 91.2
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 6.8e-164 580.9 354 79.9
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 6.8e-164 580.9 354 79.9
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 1.5e-163 579.7 354 86.4
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.0e-163 579.3 354 82.5
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 3.4e-163 578.6 354 85.0
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.4e-163 578.2 354 85.0
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 2.3e-159 565.8 359 80.8
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.1e-158 563.5 354 77.1
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.5e-158 563.1 354 78.8
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 1.9e-158 562.8 354 76.8
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 4.7e-157 558.1 354 82.2
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 4.7e-157 558.1 354 80.5
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 6.2e-157 557.8 354 76.0
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 1.1e-156 557.0 354 75.4
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.1e-156 557.0 354 75.1
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.8e-156 556.2 354 76.0
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 2.3e-156 555.8 354 74.6
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 3.1e-156 555.4 358 81.6
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 4.0e-156 555.1 354 76.3
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 1.5e-155 553.1 355 76.1
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 3.4e-155 552.0 355 74.1
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 9.8e-155 550.4 355 73.8
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 2.2e-154 549.3 354 75.7
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.4e-154 547.7 355 74.6
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 1.4e-153 546.6 354 73.2
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 1.9e-153 546.2 361 72.3
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 3.2e-153 545.4 354 74.0
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 7.0e-153 544.3 354 77.4
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 1.2e-152 543.5 354 73.4
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 3.5e-152 542.0 354 76.8
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 3.5e-152 542.0 355 80.3
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.3e-151 540.0 354 79.4
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 3.9e-151 538.5 354 72.9
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.1e-150 537.0 354 72.3
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 1.1e-150 537.0 365 77.8
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 1.5e-150 536.6 354 73.4
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 3.3e-150 535.4 354 78.0
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 3.3e-150 535.4 354 72.0
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 4.3e-150 535.0 354 71.8
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 7.3e-150 534.3 354 74.0
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 9.5e-150 533.9 357 78.4
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 2.8e-149 532.3 354 78.2
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 6.2e-149 531.2 354 77.1
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 1.4e-148 530.0 360 69.2
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 1.8e-148 529.6 355 75.8
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 2.3e-148 529.3 356 76.4
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 2.3e-148 529.3 354 70.6
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 5.2e-148 528.1 355 72.7
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 8.9e-148 527.3 354 77.7
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 1.5e-147 526.6 360 68.6
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.0e-147 526.2 354 72.3
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 2.0e-147 526.2 354 74.6
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 2.6e-147 525.8 355 70.4
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.6e-147 525.8 354 70.1
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 2.6e-147 525.8 356 77.8
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 3.4e-147 525.4 361 67.9
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 4.4e-147 525.0 354 70.3
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 7.5e-147 524.2 360 73.9
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 7.5e-147 524.2 348 75.6
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 7.5e-147 524.2 361 77.0
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 1.3e-146 523.5 360 76.7
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 1.3e-146 523.5 360 69.7
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 2.2e-146 522.7 361 67.3
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.9e-146 522.3 359 69.6
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 2.9e-146 522.3 354 69.2
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 3.7e-146 521.9 354 69.5
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 4.9e-146 521.5 355 69.6
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 4.9e-146 521.5 355 77.5
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.4e-145 520.0 360 76.1
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.9e-145 519.6 354 68.6
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 4.1e-145 518.5 354 68.4
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 5.4e-145 518.1 354 68.1
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 7.1e-145 517.7 354 68.6
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 9.2e-145 517.3 354 68.4
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.6e-144 516.5 354 69.8
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 2.7e-144 515.8 354 71.2
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 3.5e-144 515.4 361 74.5
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 3.5e-144 515.4 354 68.6
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 4.6e-144 515.0 354 67.8
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 1.3e-143 513.5 363 74.1
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 1.3e-143 513.5 354 76.0
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 3.9e-143 511.9 354 68.6
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 3.9e-143 511.9 358 76.5
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 5.1e-143 511.5 354 76.0
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 5.1e-143 511.5 355 68.2
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 1.1e-142 510.4 355 73.5
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 1.9e-142 509.6 357 74.8
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.6e-141 506.5 354 67.2
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 2.1e-141 506.1 355 71.8
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 2.1e-141 506.1 354 69.2
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 3.6e-141 505.4 354 66.7
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 8.1e-141 504.2 354 66.9
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 8.1e-141 504.2 356 67.1
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.1e-140 503.8 354 66.9
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 6.8e-140 501.1 354 68.6
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 8.9e-140 500.7 355 71.3
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 7.6e-139 497.7 354 68.6
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 9.9e-139 497.3 355 65.9
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 2.2e-138 496.1 354 70.9
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 2.9e-138 495.7 354 66.9
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 6.4e-138 494.6 358 65.9
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 8.4e-138 494.2 397 60.5
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 8.4e-138 494.2 354 66.1
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 8.4e-138 494.2 354 65.8
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 9.2e-137 490.7 355 66.2
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 1.2e-136 490.3 364 67.6
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 3.5e-136 488.8 354 71.8
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 6.6e-135 484.6 354 69.5
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.4e-132 476.1 348 66.1
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.4e-132 476.1 354 64.4
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 1.2e-131 473.8 359 69.4
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 1.5e-131 473.4 335 66.9
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.6e-131 472.6 355 63.4
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 9.9e-131 470.7 355 64.8
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 6.4e-130 468.0 355 65.6
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 1.1e-129 467.2 355 62.3
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 3.2e-129 465.7 364 61.3
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 2.3e-127 459.5 354 62.1
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 1.6e-125 453.4 356 61.2
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.1e-124 450.7 361 59.3
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.4e-124 449.5 326 76.7
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 3.1e-124 449.1 354 59.9
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 5.3e-124 448.4 354 59.3
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 4.5e-123 445.3 339 62.8
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 1.7e-122 443.4 354 61.6
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 4.9e-122 441.8 354 59.6
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.3e-119 433.0 291 74.2
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 5.6e-118 428.3 354 57.9
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 3.8e-114 415.6 297 72.1
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 5.6e-110 401.7 355 62.0
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.2e-104 384.0 327 60.9
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 6.0e-104 381.7 356 55.9
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 2.3e-103 379.8 297 65.0
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.8e-101 372.9 277 71.1
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.7e-77 293.9 214 70.6
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 1.3e-74 284.3 358 44.7
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 3.6e-72 276.2 272 52.9
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 2.8e-69 266.5 245 58.4
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.1e-68 264.6 156 78.2
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 8.0e-64 248.4 352 40.1
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 4.1e-60 236.1 175 69.7
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 7.7e-59 231.9 356 41.6
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.8e-53 213.4 126 77.8
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 8.3e-53 211.8 115 83.5
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.0e-51 207.2 124 74.2
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 2.1e-32 144.1 134 68.7
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 2.1e-32 144.1 198 40.4
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 8.1e-32 142.1 85 70.6
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 1.4e-31 141.4 138 52.2
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-31 141.0 85 70.6
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.0e-31 139.8 85 69.4
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.9e-30 135.2 85 67.1
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.4e-28 130.6 106 61.3
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 2.4e-28 130.6 188 42.0
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 5.8e-22 109.4 189 38.6
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.9e-22 108.6 58 84.5
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 9.9e-22 108.6 63 77.8
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 8.4e-21 105.5 59 79.7
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 8.4e-21 105.5 59 79.7
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 1.4e-20 104.8 148 37.2
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 3.5e-19 100.1 64 70.3
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 3.0e-18 97.1 60 73.3
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 8.7e-18 95.5 55 80.0
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.9e-17 94.4 101 48.5
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.6e-17 92.8 67 68.7
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.3e-15 86.3 59 64.4
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 5.8e-14 82.8 49 69.4
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 4.9e-13 79.7 64 57.8
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 6.4e-13 79.3 73 50.7
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.2e-11 75.1 37 78.4
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 3.5e-11 73.6 149 28.2
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.0e-10 72.0 82 46.3
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 8.7e-10 68.9 158 29.1
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 8.1e-08 62.4 50 52.0
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 8.1e-08 62.4 159 28.9
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 1.8e-07 61.2 49 55.1
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 1.2e-06 58.5 53 47.2


User provided reference genes

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