Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G076900 Prunus persica HOM05D004472 ORTHO05D007169 5.2e-262 907.1 442 100.0
MD12G1057200 Malus domestica HOM05D004472 ORTHO05D007169 2.0e-245 852.0 443 92.8
MD14G1057800 Malus domestica HOM05D004472 ORTHO05D007169 5.4e-243 844.0 438 92.9
GSVIVG01033498001 Vitis vinifera HOM05D004472 ORTHO05D007169 1.8e-230 802.4 440 87.3
QL07p023729 Quercus lobata HOM05D004472 ORTHO05D007169 1.0e-225 786.6 442 84.6
RcHm_v2.0_Chr3g0479691 Rosa chinensis HOM05D004472 ORTHO05D007169 5.6e-224 780.8 437 85.6
CiPaw.10G026500 Carya illinoinensis HOM05D004472 ORTHO05D007169 3.6e-223 778.1 442 84.2
Manes.08G044600 Manihot esculenta HOM05D004472 ORTHO05D007169 4.7e-223 777.7 443 83.7
Actinidia22035 Actinidia chinensis HOM05D004472 ORTHO05D007169 3.1e-222 775.0 443 83.7
Cpa.g.sc85.67 Carica papaya HOM05D004472 ORTHO05D007169 6.8e-222 773.9 439 84.3
TWI77G0336 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 8.9e-222 773.5 440 83.6
CSS0032720 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 3.4e-221 771.5 440 84.1
Gohir.A04G055778 Gossypium hirsutum HOM05D004472 ORTHO05D007169 4.4e-221 771.2 440 83.9
Hma1.2p1_0386F.1_g141865 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 7.5e-221 770.4 443 83.3
Potri.016G045800 Populus trichocarpa HOM05D004472 ORTHO05D007169 3.7e-220 768.1 441 83.4
FvH4_6g22330 Fragaria vesca HOM05D004472 ORTHO05D007169 4.9e-220 767.7 441 83.0
CANSAT64G0932 Cannabis sativa HOM05D004472 ORTHO05D007169 7.1e-219 763.8 442 84.8
Dinv24072 Davidia involucrata HOM05D004472 ORTHO05D007169 9.2e-219 763.5 440 83.6
Potri.006G192400 Populus trichocarpa HOM05D004472 ORTHO05D007169 9.2e-219 763.5 441 81.6
Gorai.012G101400 Gossypium raimondii HOM05D004472 ORTHO05D007169 3.5e-218 761.5 440 82.7
CSS0031939 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 4.6e-218 761.1 440 83.2
TAR623G1736 Trochodendron aralioides HOM05D004472 ORTHO05D007169 7.8e-218 760.4 443 81.9
COL.COLO4_33983 Corchorus olitorius HOM05D004472 ORTHO05D007169 1.0e-217 760.0 438 83.8
AT2G42120 Arabidopsis thaliana HOM05D004472 ORTHO05D007169 2.3e-217 758.8 438 82.2
Sabra16G0049800 Salix brachista HOM05D004472 ORTHO05D007169 3.0e-217 758.4 443 82.2
Gohir.D04G090500 Gossypium hirsutum HOM05D004472 ORTHO05D007169 3.9e-217 758.1 440 82.5
Atru.chr8.1111 Acer truncatum HOM05D004472 ORTHO05D007169 6.6e-217 757.3 438 82.9
TWI74G0546 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 1.1e-216 756.5 443 82.4
FAN14G1969 Fragaria x ananassa HOM05D004472 ORTHO05D007169 1.5e-216 756.1 451 80.7
Thhalv10016664m.g Eutrema salsugineum HOM05D004472 ORTHO05D007169 2.5e-216 755.4 441 80.7
Sabra06G0147500 Salix brachista HOM05D004472 ORTHO05D007169 2.5e-216 755.4 442 80.5
CsaV3_3G038830 Cucumis sativus L. HOM05D004472 ORTHO05D007169 3.3e-216 755.0 438 80.8
THA.LOC104824475 Tarenaya hassleriana HOM05D004472 ORTHO05D007169 4.3e-216 754.6 436 82.8
AL4G40490 Arabidopsis lyrata HOM05D004472 ORTHO05D007169 7.3e-216 753.8 439 81.3
SGA_v2.0_scaffold69G23061 Striga asiatica HOM05D004472 ORTHO05D007169 9.5e-216 753.4 439 81.3
Ca_08520_v3 Cicer arietinum L. HOM05D004472 ORTHO05D007169 4.7e-215 751.1 430 82.3
Eucgr.K01838 Eucalyptus grandis HOM05D004472 ORTHO05D007169 8.1e-215 750.4 438 83.1
Sp4g24330 Schrenkiella parvula HOM05D004472 ORTHO05D007169 3.4e-213 745.0 441 80.0
FAN05G5703 Fragaria x ananassa HOM05D004472 ORTHO05D007169 9.9e-213 743.4 441 81.4
Sopen03g016030 Solanum pennellii HOM05D004472 ORTHO05D007169 3.8e-212 741.5 443 80.6
BcaB06g29226 Brassica carinata HOM05D004472 ORTHO05D007169 4.9e-212 741.1 434 81.3
A04p32010 Brassica napus HOM05D004472 ORTHO05D007169 4.9e-212 741.1 437 80.8
Lj1g0006426 Lotus japonicus HOM05D004472 ORTHO05D007169 1.1e-211 740.0 434 81.1
Glyma.03G144600 Glycine max HOM05D004472 ORTHO05D007169 1.4e-211 739.6 432 80.8
BraA04t18658Z Brassica rapa HOM05D004472 ORTHO05D007169 1.9e-211 739.2 434 81.3
arahy.Tifrunner.gnm1.ann1.VM941Y Arachis hypogaea HOM05D004472 ORTHO05D007169 2.4e-211 738.8 441 80.5
Glyma.19G147500 Glycine max HOM05D004472 ORTHO05D007169 9.2e-211 736.9 432 80.6
arahy.Tifrunner.gnm1.ann1.W50LA9 Arachis hypogaea HOM05D004472 ORTHO05D007169 2.1e-210 735.7 441 80.0
Aa31LG1G24100 Aethionema arabicum HOM05D004472 ORTHO05D007169 2.7e-210 735.3 446 78.7
BcaC02g07263 Brassica carinata HOM05D004472 ORTHO05D007169 4.6e-210 734.6 435 80.9
TPR.G18209 Trifolium pratense HOM05D004472 ORTHO05D007169 6.0e-210 734.2 430 80.9
ECA248G2191 Erigeron canadensis HOM05D004472 ORTHO05D007169 2.3e-209 732.3 441 78.9
Lalb_Chr15g0079011 Lupinus albus HOM05D004472 ORTHO05D007169 3.9e-209 731.5 440 77.7
MSTRG.6484 Avicennia marina HOM05D004472 ORTHO05D007169 5.1e-209 731.1 441 79.8
C04p69510 Brassica napus HOM05D004472 ORTHO05D007169 5.1e-209 731.1 434 80.4
CAN.G273.20 Capsicum annuum HOM05D004472 ORTHO05D007169 8.7e-209 730.3 444 79.3
Sed0018995 Sechium edule HOM05D004472 ORTHO05D007169 1.9e-208 729.2 438 78.1
Sc25g0005090 Simmondsia chinensis HOM05D004472 ORTHO05D007169 1.9e-208 729.2 458 76.9
Carub.0004s2446 Capsella rubella HOM05D004472 ORTHO05D007169 3.3e-208 728.4 436 80.0
Rhsim03G0006000 Rhododendron simsii HOM05D004472 ORTHO05D007169 3.3e-208 728.4 423 82.5
FAN02G0232 Fragaria x ananassa HOM05D004472 ORTHO05D007169 5.6e-208 727.6 467 77.1
BolC4t28450H Brassica oleracea HOM05D004472 ORTHO05D007169 9.6e-208 726.9 435 80.2
HanXRQChr13g0390871 Helianthus annuus HOM05D004472 ORTHO05D007169 6.2e-207 724.2 443 78.8
Medtr7g093210 Medicago truncatula HOM05D004472 ORTHO05D007169 6.2e-207 724.2 426 80.8
FAN09G4048 Fragaria x ananassa HOM05D004472 ORTHO05D007169 5.3e-206 721.1 451 78.3
Aqoxy1G00476 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 9.0e-206 720.3 438 76.9
Nn3g18269 Nelumbo nucifera HOM05D004472 ORTHO05D007169 9.0e-206 720.3 437 79.2
EL10Ac3g06916 Beta vulgaris HOM05D004472 ORTHO05D007169 1.5e-205 719.5 438 78.5
Solyc03g063340.3 Solanum lycopersicum HOM05D004472 ORTHO05D007169 2.6e-205 718.8 424 81.1
Migut.J01839 Erythranthe guttata HOM05D004472 ORTHO05D007169 1.1e-203 713.4 439 77.2
Thecc.05G171300 Theobroma cacao HOM05D004472 ORTHO05D007169 1.4e-203 713.0 396 84.8
PGR142G1378 Punica granatum HOM05D004472 ORTHO05D007169 2.4e-203 712.2 443 76.5
Hund19203 Selenicereus undatus HOM05D004472 ORTHO05D007169 2.4e-203 712.2 424 79.7
Phvul.001G143200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 3.2e-203 711.8 432 77.5
Lj2C366G13 Lonicera japonica HOM05D004472 ORTHO05D007169 5.4e-203 711.1 421 81.0
Oeu007762.1 Olea europaea HOM05D004472 ORTHO05D007169 1.2e-202 709.9 427 80.3
Lsat_1_v5_gn_5_163440 Lactuca sativa HOM05D004472 ORTHO05D007169 1.1e-200 703.4 426 78.9
Nitab4.5_0001137g0080 Nicotiana tabacum HOM05D004472 ORTHO05D007169 4.3e-200 701.4 442 77.8
PSO339G4742 Papaver somniferum HOM05D004472 ORTHO05D007169 1.6e-199 699.5 438 76.7
Psat3g068520 Pisum sativum HOM05D004472 ORTHO05D007169 4.8e-199 698.0 414 79.5
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 9.9e-197 690.3 429 76.2
CSS0048424 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 2.9e-196 688.7 454 75.6
PSO384G4825 Papaver somniferum HOM05D004472 ORTHO05D007169 3.8e-196 688.3 438 75.6
Phvul.001G142200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 8.4e-196 687.2 432 75.0
VMungo1383G3660 Vigna mungo HOM05D004472 ORTHO05D007169 2.3e-193 679.1 413 76.8
Os03g0128500 Oryza sativa ssp. japonica HOM05D004472 ORTHO05D007169 8.1e-191 670.6 431 71.9
vmacro07908 Vaccinium macrocarpon HOM05D004472 ORTHO05D007169 4.0e-190 668.3 473 70.6
Nitab4.5_0007619g0020 Nicotiana tabacum HOM05D004472 ORTHO05D007169 5.3e-190 667.9 422 77.5
Haze_19988 Corylus avellana HOM05D004472 ORTHO05D007169 2.6e-189 665.6 498 67.7
Zm00001eb002170 Zea mays HOM05D004472 ORTHO05D007169 2.1e-186 656.0 433 70.7
ClCG10G017520 Citrullus lanatus HOM05D004472 ORTHO05D007169 9.6e-184 647.1 446 71.3
Ah.13g075820 Amaranthus hybridus HOM05D004472 ORTHO05D007169 1.6e-183 646.4 397 78.1
Haze_19990 Corylus avellana HOM05D004472 ORTHO05D007169 1.5e-176 623.2 471 66.7
HPP92_018591 Vanilla planifolia HOM05D004472 ORTHO05D007169 2.5e-176 622.5 434 67.3
SEGI_25790 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 3.7e-175 618.6 441 66.0
Sed0005670 Sechium edule HOM05D004472 ORTHO05D007169 3.2e-171 605.5 364 79.7
MELO3C030998.2 Cucumis melo HOM05D004472 ORTHO05D007169 4.2e-171 605.1 538 59.5
Duzib128G1617 Durio zibethinus HOM05D004472 ORTHO05D007169 2.7e-170 602.4 439 68.3
SalBow6G5437 Salvia bowleyana HOM05D004472 ORTHO05D007169 2.7e-170 602.4 420 70.7
PGSC0003DMG400014974 Solanum tuberosum HOM05D004472 ORTHO05D007169 4.6e-170 601.7 359 81.6
HPP92_006516 Vanilla planifolia HOM05D004472 ORTHO05D007169 3.9e-169 598.6 479 61.4
CDE04G2547 Ceratophyllum demersum HOM05D004472 ORTHO05D007169 7.4e-168 594.3 396 73.2
ATR0807G137 Amborella trichopoda HOM05D004472 ORTHO05D007169 1.6e-162 576.6 375 71.7
AUR62015368 Chenopodium quinoa HOM05D004472 ORTHO05D007169 3.3e-160 568.9 437 65.7
Aqoxy2G02978 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 2.3e-153 546.2 465 60.2
AUR62012036 Chenopodium quinoa HOM05D004472 ORTHO05D007169 3.3e-152 542.3 420 65.2
Pp3c3_28090 Physcomitrium patens HOM05D004472 ORTHO05D007169 2.2e-151 539.7 440 57.7
Mapoly0039s0092 Marchantia polymorpha HOM05D004472 ORTHO05D007169 2.8e-151 539.3 441 59.2
SMO111G0006 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 6.5e-148 528.1 435 57.9
AagrBONN_evm.TU.Sc2ySwM_362.678 Anthoceros agrestis HOM05D004472 ORTHO05D007169 5.5e-147 525.0 424 59.9
SMO339G0063 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 2.5e-139 499.6 431 56.6
CBR_g38861 Chara braunii HOM05D004472 ORTHO05D000002 5.9e-133 478.4 443 53.7
CARHR137180 Cardamine hirsuta HOM05D004472 ORTHO05D007169 6.1e-130 468.4 270 81.1
CBR_g63079 Chara braunii HOM05D004472 ORTHO05D007169 3.9e-124 449.1 410 54.4
MBI06_g29494_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 4.1e-118 429.1 246 80.1
Ciclev10012551m.g Citrus clementina HOM05D004472 ORTHO05D007169 1.1e-110 404.4 244 82.0
Ciclev10012767m.g Citrus clementina HOM05D004472 ORTHO05D007169 3.6e-98 362.8 196 84.2
Hma1.2p1_0386F.1_g141870 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 6.2e-98 362.1 196 84.7
SHI42174 Sapria himalayana HOM05D004472 ORTHO05D007169 2.4e-97 360.1 285 62.8
PRCOL_00001477 Prasinoderma coloniale HOM05D004472 ORTHO05D007169 2.9e-95 353.2 385 44.9
Peaxi162Scf00258g00730 Petunia axillaris HOM05D004472 ORTHO05D007169 3.8e-95 352.8 244 74.6
MCO03G010 Micromonas commoda HOM05D004472 ORTHO05D007169 2.1e-93 347.1 450 42.0
Cre08.g374050 Chlamydomonas reinhardtii HOM05D004472 ORTHO05D007169 4.3e-91 339.3 508 38.0
MBI06_g29491_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 3.4e-64 250.0 157 76.4
SHI33668 Sapria himalayana HOM05D004472 ORTHO05D007169 1.0e-60 238.4 197 63.5
BcaNung04407 Brassica carinata HOM05D004472 ORTHO05D007169 1.5e-51 208.0 246 47.6
SEGI_31079 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 2.0e-51 207.6 169 58.6
Lsat_1_v5_gn_5_163500 Lactuca sativa HOM05D004472 ORTHO05D007169 2.2e-50 204.1 184 57.1
BcaNung06765 Brassica carinata HOM05D004472 ORTHO05D027254 4.2e-46 189.9 141 66.0
Haze_26548 Corylus avellana HOM05D005705 ORTHO05D007152 9.4e-46 188.7 419 29.8
BcaC04g21709 Brassica carinata HOM05D004472 ORTHO05D013781 1.8e-44 184.5 152 60.5
BcaC03g16493 Brassica carinata HOM05D004472 ORTHO05D013781 2.3e-44 184.1 195 51.3
Peaxi162Scf00258g00729 Petunia axillaris HOM05D004472 ORTHO05D007169 7.4e-43 179.1 95 81.1
A02p27200 Brassica napus HOM05D004472 ORTHO05D013781 1.3e-42 178.3 113 69.9
SEGI_39608 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 6.1e-37 159.5 132 56.8
BcaB02g11100 Brassica carinata HOM05D004472 ORTHO05D027254 1.4e-36 158.3 145 57.9
BolC9t55720H Brassica oleracea HOM05D004472 ORTHO05D013781 8.2e-34 149.1 96 70.8
A09p46770 Brassica napus HOM05D004472 ORTHO05D013781 9.1e-33 145.6 86 74.4
BcaC01g04270 Brassica carinata HOM05D004472 ORTHO05D013781 7.7e-32 142.5 125 58.4
BcaC02g12460 Brassica carinata HOM05D004472 ORTHO05D013781 9.4e-30 135.6 129 57.4
BcaNung00145 Brassica carinata HOM05D004472 ORTHO05D013781 1.5e-27 128.3 126 54.0
BcaC05g24672 Brassica carinata HOM05D004472 ORTHO05D027254 4.1e-25 120.2 126 53.2
CARHR228030 Cardamine hirsuta HOM05D004472 ORTHO05D039758 4.4e-19 100.1 67 76.1
SEGI_06501 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 4.4e-19 100.1 96 51.0
C03p43020 Brassica napus HOM05D004472 ORTHO05D013781 1.3e-18 98.6 66 69.7
BcaB02g11125 Brassica carinata HOM05D004472 ORTHO05D039758 1.1e-14 85.5 65 69.2
CARHR228020 Cardamine hirsuta HOM05D004472 ORTHO05D007169 3.0e-12 77.4 71 56.3
SMO364G0765 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 5.7e-11 73.2 43 76.7
BcaB06g25539 Brassica carinata HOM05D004472 ORTHO05D094557 6.4e-10 69.7 82 47.6
BraA08t32859Z Brassica rapa HOM05D004472 ORTHO05D027254 1.4e-09 68.6 51 66.7
BolC3t16570H Brassica oleracea HOM05D004472 ORTHO05D013781 4.1e-09 67.0 55 58.2
BraA07t27940Z Brassica rapa HOM05D004472 ORTHO05D013781 4.1e-09 67.0 55 58.2
BraA06t25637Z Brassica rapa HOM05D004472 ORTHO05D013781 9.2e-09 65.9 53 58.5
CARHR241940 Cardamine hirsuta HOM05D004472 ORTHO05D007169 4.3e-06 57.0 40 62.5
BolC1t01386H Brassica oleracea HOM05D004472 ORTHO05D041278 7.3e-06 56.2 79 45.6


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